Seriola dumerili (greater amberjack): 111238044
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Entry
111238044 CDS
T05606
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdu03041
]
111238044
Enzymes [BR:
sdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111238044
Spliceosome [BR:
sdu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111238044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
111238044
NCBI-ProteinID:
XP_022623146
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MRGSYGDRDRDRARDRGSPRFGSSRGGPPSGKKFGNPGDRLRKKRWDLDELPKFEKNFYS
EHIEVQRMSQYDLEEYRRKKEITVRGSGCPKPVTTFHQAQFPQYVMDVLMHQNFKEPTAI
QAQGFPLALSGRDMVGIAQTGSGKTLSYLLPAIVHINHQPYLERGDGPICLVLAPTRELA
QQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLR
RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYVQI
NVGALELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKKRCDDLTRR
MRRDGWPAMCIHGDKSQPERDWVLSEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTNKGTAYTFFTPGNLRQARELIRVLEEARQAINPKLLQLVDTGRG
GGGGGGGRPRFRGGSNSNNPNLMYQDECDRRMRSVGGSGSSKDSRSSSSYSRDSRDSRGG
SSRDGDRTSSSSSYRDRSSRDGGRSYSSSSSSYDQYQNNSGGGGSSQYGSSRGTSGSAGG
GAGQAPPPSSVPQPLMAQQFNPPQPMMGLMGHSPFQFAPPPPPPSSGRK
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagaggttcgtacggagacagagatagagaccgtgcccgtgacagaggcagccctcgt
ttcgggtccagcagaggtggaccaccgtcgggtaagaagtttgggaaccccggggaccgt
ttacgaaagaagaggtgggacctggacgagcttcccaaatttgagaagaacttctacagt
gaacacattgaagtgcagagaatgagccagtatgatcttgaggagtatcgcaggaagaaa
gaaatcactgttcgaggctcaggctgcccaaagcctgtcaccaccttccatcaggcacag
tttccccaatatgtaatggatgtactgatgcatcagaacttcaaggagcccacagccatt
caggctcaaggtttccccctggctctcagcgggagagacatggtgggcattgctcagact
ggctctgggaagacattatcgtatctcctgcctgcaattgtgcacatcaaccatcagccc
tacctggagcgtggagacggacccatttgcttggttctggcccccacaagagaactggcg
cagcaggtccagcaggtggcatatgactatgggaagtcatcccgcatcaaaagcacttgt
gtgtatggaggtgctcccaagggacctcaaatccgagacttggagagaggcgttgagatc
tgcattgccacgccaggtcgtttgattgacttccttgaggctggaaagaccaacctgcgg
cgctgcacatacttagttctagatgaagcagaccgtatgctggacatgggttttgaacca
cagattcgcaaaattgtggaccagatcaggcctgacagacagaccctgatgtggagcgct
acgtggcctaaagaggttcgccagctggcagaggacttcctgaaggactatgtccaaatc
aatgttggagcactggaactcagtgccaaccacaacatccttcagatagttgatgtctgt
atggagagtgagaaggaccacaagttgatccagctgatggaggagattatggctgagaaa
gagaacaagaccatcatctttgtggagaccaagaaacgatgtgacgacctcacacgcaga
atgagacgtgatgggtggcctgccatgtgtatccatggtgataagagccagccagagaga
gactgggtgttgtcagagttccgcagcggcaaagctcccatcctcatcgctactgacgtg
gcctcacgcggtttggatgtggaggatgtcaagtttgtcatcaattatgattatcccaat
tcatcggaggactacatccaccgcatcggccgtacggcccgcagcaccaacaaaggcacc
gcctacaccttcttcaccccggggaacctccgccaggcccgggagctgatccgggttctg
gaggaggcccgacaggccatcaaccccaaactgctgcagctggttgacactggacgtgga
ggaggaggcggaggaggtggccgcccccgcttccgtggtggctccaattctaacaacccc
aacctgatgtaccaggacgagtgtgatcgccggatgcgttctgtgggtgggagcggcagc
tccaaggacagccgcagcagcagtagctacagtcgggacagcagagacagccgcggtggg
agcagccgggacggggaccgcacctcctcttcctcctcatacagagatcgcagcagcagg
gacggaggacgcagctacagctccagctccagctcgtatgaccagtaccagaataacagc
ggcggcggcggcagcagccagtacggcagctccaggggcacatctgggtcagcgggcggt
ggagcggggcaggccccgcctccatcgtcggttccccagcctctgatggcccagcagttc
aaccctccccagcccatgatgggcctgatggggcactcccctttccagtttgctcctcca
ccaccgcctccttcctcagggagaaagtaa
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