Seriola dumerili (greater amberjack): 111238083
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Entry
111238083 CDS
T05606
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04120
Ubiquitin mediated proteolysis
sdu04137
Mitophagy - animal
sdu04144
Endocytosis
sdu04340
Hedgehog signaling pathway
sdu04350
TGF-beta signaling pathway
sdu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111238083
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
111238083
04350 TGF-beta signaling pathway
111238083
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111238083
04137 Mitophagy - animal
111238083
09144 Cellular community - eukaryotes
04520 Adherens junction
111238083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111238083
04121 Ubiquitin system [BR:
sdu04121
]
111238083
03029 Mitochondrial biogenesis [BR:
sdu03029
]
111238083
Enzymes [BR:
sdu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
111238083
Membrane trafficking [BR:
sdu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
111238083
Autophagy
Mitophagy
Other mitophagy associated proteins
111238083
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
HECT type E3
111238083
Mitochondrial biogenesis [BR:
sdu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
111238083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
111238083
NCBI-ProteinID:
XP_022623201
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNKL
SPNDSDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPGRPLSCIVDENTPISTNGATPTTALPPSDGDQRAQERRVRSQ
RHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEEL
GPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSPNGSRGGIESQNVSR
QNQLKDQAQQALVSPGQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRIEVS
REEIFEESYRQVMKMRPKDLWKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQ
YSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPIT
LDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVTQDTK
KEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKIDINDWK
SNTRLKHCTPDSNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLF
TIHQIDASTNNLPKAHTCFNRIDIPPYEHYDKLYDKLLTAIEETCGFAVE
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggagttcggcggaatggcccggtgaagctgcgactaacagtcctctgt
gccaaaaacctggtgaagaaggacttcttccgcctccccgatccctttgccaaggtggtt
gtggacggctcggggcaatgccactctacagacactgtgaggaacacacttgaccccaag
tggaatcaacactacgacctatacattggaaaatcagactccatcaccatcagtgtgtgg
aatcacaagaagattcacaagaagcaaggggccgggttcctgggctgtgtccgccttctg
tccaacgccatcaaccgccttaaagacacaggctaccagagactagacttgaacaagctg
agtcccaatgacagtgacacagtcagaggccagatagtggtgagcctgcagtctagggac
cggataggcacaggaggccctgtggtggactgcagtcgcctgtttgacaatgatcttcca
gatggctgggaggagaggaggaccgcgtctggacgaatccagtacttgaaccacatcaca
cgcaccacacagtgggagaggcctaccaggcctgcatcagagtactccagccctggccgg
cctctcagctgcatcgtggatgagaacacgcccatcagtacgaacggggccacgcccacc
acggcgttgccacccagtgacggcgaccagcgggcccaggagagacgggtccgctcgcaa
aggcaccgcaactacatgagcagaacccacctgcacacgcccccggacctgcctgagggc
tacgagcaaaggaccacacagcagggccaagtgtacttcctccacactcagacaggtgtc
agcacgtggcacgacccccgagtacccagagatctgagcaatgtgaactgtgaggagctg
ggtcctctacctccaggatgggagataaggaacactgccaccgggagggtttactttgtc
gaccacaacaaccgcaccacgcagttcacagacccacgcctctctgccaacctgcatcta
gtcctaaatccaagccctaatggttctcgaggaggcatcgaaagtcagaatgtcagtcgt
cagaaccagttgaaggatcaggcccagcaggctctggtgtcccccggtcagctcccagag
gaggccgagtgcctcacggtgcccaagtacaagagagaccttgttcagaagctcaagatc
ctccgccaggaactgtctcagcagcagcctcaggccggccactgccgcattgaggtgtcc
cgtgaggagatctttgaggaatcgtatcgacaggtgatgaagatgaggccgaaggacctg
tggaaaaggctaatggtgaagtttagaggagaagaggggctcgactatggcggagtggcc
agggagtggctttatctgctgtcgcatgagatgctgaacccgtactatggcctgttccag
tactcccgcgatgacatctacacactgcagataaacccagactctgccgtcaaccccgag
cacttgtcatactttcacttcgttggccgtatcatggggatggcagttttccatggccac
tacatagacggaggctttactctacccttctacaaacagctgctgggtaaacccatcacc
ctggacgacatggagtctgttgaccccgacctgcacaacagtctcgtctggattctggac
aatgacatcacaggtgtgctggaccacaccttctgcgtagaacacaatgcctatggagag
atcatccagcacgagctcaagcccaacggtaagagcatccccgtcacccaggacaccaag
aaggagtacgtccggctctacgtcaactggcgtttcctgagaggaatagaggcccagttc
ctggctctacagaagggcttcaatgaggtcatcccccaacacctgctcaaggcttttgac
gagaaggagctggagctgattgtatgtgggctgggtaaaatcgacatcaacgactggaag
tccaacacgcggctcaaacactgcactccggacagcaacattgtgaaatggttctggaaa
gccgtggagtcgttcgacgaggagcgcagagcgcggctgctgcagtttgtcactggctcc
tccagagttcctctgcagggcttcaaggccctccaaggtgccgcaggcccacggctcttt
accatccaccagattgatgccagcaccaacaacctgcccaaagcccacacctgtttcaat
cggattgacattcctccgtacgagcactacgacaaactgtacgacaagttgctcactgcc
atcgaggagacgtgcggctttgctgtagagtga
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