Seriola dumerili (greater amberjack): 111238671
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Entry
111238671 CDS
T05606
Symbol
rbm26
Name
(RefSeq) RNA-binding protein 26 isoform X1
KO
K13192
RNA-binding protein 26
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdu01009
]
111238671 (rbm26)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111238671 (rbm26)
03041 Spliceosome [BR:
sdu03041
]
111238671 (rbm26)
Protein phosphatases and associated proteins [BR:
sdu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111238671 (rbm26)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
111238671 (rbm26)
Spliceosome [BR:
sdu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111238671 (rbm26)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
PWI
RRM_Nup35
zf-CCCH
zf_CCCH_4
RRM_3
COG5_N
Motif
Other DBs
NCBI-GeneID:
111238671
NCBI-ProteinID:
XP_022624020
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MIIENLDALKTWLSETLEPICDADPSALAKYVVALVKKDKSEKELKALCIDQLDVFLQKE
TQPFVDKLFEAVNNKSYLPQPEQPSSLGKVEKDEQKKDETNREEEREKKFSRRVNHSPPQ
SSSRYSRDSRRGDDRKRDDRSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYSRSRSRSWSK
DRIRDRDRERDRDRDRDRDRDRDRDRSRSRSHSRTRSRSRSRERDPGKLKYDHDRVDRSE
SGDGYSAAALVSTATTSHFPVPTLSSTITVIAPTHHHSNNTTESWSDFRPEHPVDRGPFI
RGPPPQQRKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDVNLPSMLPFQPPPIPGVDAPP
PPGLPPPPPLMNPPPVNLRPPVPPPGALPPSLPPVAGPPPPLPPLQPSGMDAPPNSITSS
VPTIVTSGMRSSLPQASAPLFTSGICYNYESDVYNPEAPSITNTSRPIYRHRVNAQRPNL
IGLTMGEVDQPQREKIPNNSMRIVMESDSRKRPAVSHDGGLPSKKPWFDKPNFNKPNHQG
YHKRAPFFPNTKLLVRQIPPELNNISKLNEHFSKFGTIVNLQVAFQNDLEGALIQFASPD
EAKRAMQSTEAVLNNRFIRVHWFRDDGSDGQGQSHSHSQQQPQPQPAMQPSTTSLKQSVK
DRLGPMLPANSEPSQDSSVVSQNPSKVSVKDRLGFSSKPAAPVEKVFSTSVGLTKTVYNP
AALKAAQKTSEEALKKKQEALKLQQDVRKKKQEILEKHIETQKLLISKLEKNKAMKAEDK
AKIMETLGMLTKSITKLQEEIKGISSSNNLLRTGKSKAQAQKELLDAELDLYKKTQAGED
TALLKIKYTQLQIEAAKRGLLSSGRGRGVPARGRGALRARGRGSRGRGRGVPLHAVVDHR
PRALEISGFTETDRVDLLPHFAQFGEIEDCQIDESNLSAVITYKTRAEAEQAALHGVRFN
NQTLRLAWHKPVTALSTVDADEAEPEEDEYPEESLSDDALLQDDDEEEDDNEPRSWRR
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgatcattgaaaaccttgatgccttgaaaacatggctgtctgaaacccttgagcccatc
tgtgatgccgacccttctgccctcgcaaagtatgttgttgctttggtgaagaaggataaa
agtgaaaaggaactcaaagccctgtgtatagaccagttggatgtatttcttcagaaagaa
acccagccatttgtggataagctgtttgaagctgttaacaacaaaagctacctcccacag
cctgagcaaccatcctctctgggcaaagtagagaaagatgagcagaagaaagatgagaca
aatcgggaggaagaacgagagaagaagttttctcgacgagtgaatcacagccctccacaa
tcaagctctcgttacagtcgagatagcaggagaggagatgaccggaagagagatgatcgt
tccaggaagagagattatgaccgcaacccgccaaggagagactcctatcgcgatcgctac
aatcgcaggagaggccgcagtcgcagttacagtcgtagtcgcagccggagttggagcaag
gatcgcatccgagaccgtgacagagagagggacagggatagagacagagacagggacaga
gatagggatcgagatcgcagcaggagccgctcccacagcagaactcggtccagaagcagg
agtagagaacgagatcctggaaaattgaagtacgatcacgatcgagtggacaggtcagag
agtggtgacggctactccgcagcagctctggtctccactgcaaccacttcgcacttccca
gtgccaacactgagcagcaccattacagtcatcgcccccacacatcatcatagcaacaac
accactgagagttggtcagacttccgtcctgagcaccctgtggatcgtggcccttttatt
aggggaccacccccccagcagaggaagcgatgccgtgactacgatgaaaagggcttctgc
atgcgaggcgatatgtgtccttttgaccatggaagtgacccagttgtagtggaagatgtc
aatttgcccagtatgttgcccttccaacctccgccaatcccaggtgtggacgcaccgcca
ccaccagggctcccaccgccaccacctctcatgaaccccccacctgtgaacctgcggccc
cctgtgcccccaccaggtgccctcccacccagccttccacctgttgcaggtccccctcct
ccgcttcctccactacaaccatcgggcatggatgcacctcccaattccattaccagctct
gttcccactatcgtcacctctgggatgcgctcctcactaccccaggcctcagcgccactt
ttcacctccggtatttgctacaactatgagtcagatgtgtacaatcctgaggctcccagc
atcactaatacctccaggcctatctaccgccaccgcgtcaatgcccagagacccaacctg
attggactcacaatgggggaggtggaccagccacagagagaaaagattcctaacaacagt
atgcggatcgttatggaatctgattcaaggaagagaccagctgtctcccatgatggaggc
ctcccctccaagaaaccttggtttgacaaacccaactttaacaaacccaaccaccagggc
taccacaaaagagccccattctttcctaacaccaagctgctggttcggcaaattccacct
gagctcaacaacatcagcaaactcaatgaacatttcagcaagtttggcaccatcgtcaac
ctgcaggtggccttccaaaatgacctagagggggcattgatccagtttgcctctccagat
gaggccaagcgggctatgcaaagcacagaggctgttctcaacaaccgcttcatcagagtg
cactggttccgtgatgatgggagcgatggacagggccagtcccactcacactcacagcag
cagccgcagccacagccagccatgcagccctcaaccacgtctctgaagcagtctgtcaaa
gatcgccttggaccaatgctccctgcaaactctgagccctcccaagactccagcgtagtc
tctcagaatccttctaaagtgtcagtgaaagaccgtttgggattttcttccaaacctgca
gctcctgtcgaaaaagtgttttcaacatctgtgggcctcacaaagactgtatacaatcct
gctgccctgaaggcagcccaaaaaacctcagaggaagcactgaagaagaaacaggaagcc
ctaaaactacagcaggatgttcggaagaagaagcaggaaatattggagaaacacattgag
acacagaagcttctgatatccaaacttgagaagaacaaagcaatgaaagcagaggataaa
gccaagatcatggaaactttgggaatgttaaccaagagcatcaccaagcttcaagaagag
ataaagggaatctcaagcagcaacaacttgctacgcaccggcaagagcaaggctcaggca
cagaaggaactgctcgacgcagagctggacctttacaagaagacccaggccggagaggac
actgctttgttgaaaattaagtacacccagctgcaaattgaggcagctaaaaggggactt
ctgtcttcaggacgaggccggggggttccggctcggggccgtggtgcgctcagggcccgg
ggaaggggctccagaggacgaggaagaggtgtgccactgcatgcagtcgtggaccatcga
ccacgagccttggagatttctgggttcactgagacggaccgagtagacttgctgccacac
tttgctcaatttggagagattgaagactgccagattgatgagagcaacctgtctgcagtc
atcacttacaagacaagagcggaggctgaacaggcggctctccatggagtgagattcaac
aatcagactttacgcctggcgtggcataagcctgtcacagctctcagtactgtggatgct
gatgaggcagaaccagaagaggatgagtacccagaagagtccctgagtgacgatgcactg
ctgcaggatgatgatgaggaagaggatgacaacgagcctcgctcctggcgcagatga
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