Seriola dumerili (greater amberjack): 111238702
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Entry
111238702 CDS
T05606
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
111238702 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111238702 (myo5b)
04131 Membrane trafficking [BR:
sdu04131
]
111238702 (myo5b)
03029 Mitochondrial biogenesis [BR:
sdu03029
]
111238702 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sdu04812
]
111238702 (myo5b)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
111238702 (myo5b)
mRNA cycle factors
P-body specific factors
111238702 (myo5b)
Membrane trafficking [BR:
sdu04131
]
Others
Actin-binding proteins
Myosins
111238702 (myo5b)
Mitochondrial biogenesis [BR:
sdu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
111238702 (myo5b)
Cytoskeleton proteins [BR:
sdu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
111238702 (myo5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
ATG16
Myosin_N
Ac76
AAA_22
INTS5_N
nSTAND3
AAA_16
Motif
Other DBs
NCBI-GeneID:
111238702
NCBI-ProteinID:
XP_022624059
LinkDB
All DBs
Position
Unknown
AA seq
1820 aa
AA seq
DB search
MTSDYYPYSKFTRVWIPDPEDVWRAAEITRDYKEGESVLHLKLEDETPLEYSIGPKSNPL
PFLRNPDILVGENDLTALSYLHEPAVLHNLRVRFLESNHIYTYCGIVLVAINPYEQLQIY
GEEVINAYSGQNMGDMDPHIFAVAEEAYKQMGRDERNQSIIVSGESGAGKTVSAKYAMRF
FATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFSRGFHIIGANM
RTYLLEKSRVVFQAEDERNYHIFYQLCASASLPELTELSLTSAEDFTYTSLGENIFIEGV
NDAEDFKKTREAFGLLGVKDSSQSSIFRVMASILHLGNVEICSERDGESCHISRDDPHLK
HFCRLLGVELQQMEHWLCHRKLVTASETYVKTMSSKMAANARDALAKHIYARMFDWIVKH
INKSLHTSSKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYM
KEQIPWTLIDFHDNQPCIDLIEARLGVLDLLDEECKVPKGTDQNWAQKLYKQHSSSVHFQ
KPRMSNTSFIIIHFADKVEYQCDGFLEKNRDTVYEEQINILKASQFQLVADLFHEKDDPP
PSKSSRVNVRPAKSAPRAPNKEHRKTVGHQFRSSLHLLMETLNATTPHYVRCIKPNDFKE
AFSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFSRYRVLMRKSDMTSSDKKLVC
KNLLETLIKEPDMFQFGKTKIFFRAGQVAYLEKLRADKFRAACIKIQKTVRGWLQRVRYR
KIRKTAITLQRYGRGYLARRYAEYLRLTRAALVCQKQYRMVRERRSFLRVRRAVVTIQAY
AKGMFTRRIYWEFLLHHKAMIIQRSVRRWLLRRKFRRARDAAITIQCAYRRLLARRRLKQ
LKIEARSAQHLKKLNSGMENKIVQMQRKMDDQSKEYRTQNEQLQIVNVSLGSEVNKLQKE
LDQIRGQQGEGSQLTSLQEELQKLREELQEAHAHRKRLEDEHGTEKLDLRQRVEELEAEN
SLLKSEKDEMNQRILQLSNSSTDGSSVSQREESLGAELDAERQRYQNLLKEFSRLEQRYD
NVKEELSLTKFHPGHRRNPSNQSSLESDSNYPSISTSEVGDTEDAVQLVEELGVEKAAMD
ISLFMKLQKRVRELEQERKRLQLNVDKMEELAKRRGSEVKSPTSQQETADLAYNNLKRQE
LESENKKLKNDLNELRKTIAERASQNNSSNELQDSYNLLLSQLKAANEELDARKEEVLIL
RTQIVSTAQLQEKNQHIEESNNVPEVENSKEPVDKEEALRAYHGLCDSKKLLEAQLQSQS
RQHKDELEALHTQIELLKDDIEKKQEILNYTMSLSPEAQVEYSVQQEITRLTNDNLDLKE
LVEKLEKNERKLKKQLRIYMKKVQELEASHAAAQTSRSRPELSRQVTVQRKEKDFEGMLE
FYKEDEALLVKFLITDIKPNTVSATVPCLPAYILFMCIRHADYINDDQKVESLLTSTINA
IKKVLKKNNEDFEMTSFWLANTSRLLHCLKQYSGDEVFMTQNTVKQNEHCLKNFDLAEYR
QVLSDLSIQIYQQLIKVAEATIQPMIVSAMLESESIPSLAGVKPMGYRNRSSSMDTDAGG
PSSYTLEALIRQLGQFHAIMRDHGLDPEIVGQVVRQLFHCINAVTLNNLLLRKDVCSWST
GMQLRYNTSQMEEWLRGNNLYQSKAAATLEPIIQAAQLLQVKKKTSQDGEAICSLCSALT
TQQIVKILNLYTPLNEFEERVTVSFIRNIQNRLQERNDPPQLLVDTKHTFPVLFPYTPSA
LSLETLHIPASLGLDFLIRV
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcgactactatccctactccaagttcactcgggtctggatcccggaccctgag
gatgtgtggagagctgcagagatcaccagggattataaagaaggagagtcggttctccac
ctcaaactggaggatgagacgcctctggagtactccattggtccgaagagtaaccctctt
cccttcctccgtaaccccgacatcctggtgggggagaacgacctcactgctctcagttac
ctgcatgaacctgccgtcctgcacaacctccgagtccgcttcctggagtccaaccacatc
tacacctactgcgggatagtgcttgtggccatcaacccgtacgagcagctgcagatctac
ggcgaggaggtcatcaacgcctacagtggacagaacatgggcgacatggacccgcacatc
ttcgctgtggcggaggaggcgtacaaacagatgggcagagacgagaggaaccagtccatc
atcgtcagcggagagtcaggagcgggaaagacggtgtctgccaagtacgccatgcgcttc
ttcgccacagtgggaggttcagccaacgacaccaacgtggaggagaaggtcctcgcctcc
agccccatcatggaggcgattggaaacgctaaaaccactcgaaacgacaacagcagtcgc
tttgggaagtacatccagatcggcttcagccgagggttccacatcatcggagccaacatg
agaacatacctgctggagaagtcccgggtcgtcttccaggctgaagatgagaggaactat
cacatcttctatcagctctgtgcttcagcctctttaccagagctgacagagctcagcctc
accagtgcagaggacttcacctacacgtctttaggagagaacatcttcatcgagggagtg
aacgacgccgaagacttcaagaagaccagagaggccttcggtctgctgggtgtgaaggac
agcagtcagagcagcatcttcagagtcatggcgtccatccttcacctggggaacgtagag
atctgctcggagcgagacggggagtcctgtcacatctcgagggacgacccccacctgaag
cacttctgccggctcctgggggtggagctgcagcagatggagcactggctctgtcacagg
aagctagtcactgcctccgagacctacgtcaagaccatgtccagcaaaatggctgccaac
gcccgcgatgcgctcgccaagcacatctacgcacgcatgttcgactggatcgtgaagcac
atcaacaagtcgctgcacacgtcctccaagcagcactccttcatcggcgtcctggacatc
tacgggttcgagacgttcgaggtgaacagcttcgagcagttctgcatcaactatgccaac
gagaagcttcagcagcagttcaactctcacgtgtttaagctggagcaggaggagtacatg
aaggaacagatcccctggactctgatagacttccatgacaaccagccctgcatagacctg
atcgaggctcggctcggagtcctggacctgctggatgaagagtgtaaggtgccgaagggg
acagatcagaactgggcccagaaactctacaagcagcactccagcagcgtccacttccag
aaacctcgtatgtccaacacctccttcatcatcattcacttcgctgacaaggtggaatat
cagtgtgatggcttcctggaaaagaacagagacacggtttatgaggagcagatcaacatc
ctgaaggccagtcagttccagctggtagcggacctgttccatgagaaagacgaccctccc
ccctccaagtcgtccagagtgaatgtccggccggcgaagtcagcgccccgcgctcccaac
aaggagcacaggaagacggtgggacaccagttccgcagctccctccacctcctcatggag
actctgaacgccaccacgcctcactacgtccgctgcatcaagcccaacgacttcaaggag
gccttctcgttcgactcaaggcgagcggtgcagcagctccgcgcctgcggagtcctggag
acgatccgtatcagtgcggccggatacccgtccaggtggacgtacccagacttcttcagc
aggtatcgagtgttgatgaggaagtccgacatgacgtcatcagacaagaagctggtgtgt
aaaaacctgctggagacgctgattaaggagcccgacatgttccagtttggaaagacaaag
atcttcttccgggcggggcaggtggcgtacctggagaagctccgggccgataagttccgc
gccgcctgcatcaagatccagaagacggtccgaggctggctccagagagtccggtaccgc
aagattcgcaagaccgccatcactctgcagagatatggccgaggatacctggcccgcagg
tacgctgagtacctgcgtctgactcgagccgccctcgtctgtcagaaacagtaccgcatg
gtgagagagcgccgctctttcctgagggtgagacgggccgttgtcaccatccaggcctac
gccaaaggaatgttcacccgccggatctactgggagttcctgctgcaccacaaggccatg
atcatccagaggagcgtccggcgctggctgctcaggaggaagttcagacgggcgcgcgac
gctgccatcaccatccagtgtgcgtacagacggctacttgccagacgacgactgaagcag
ctgaagatcgaagctcgctccgcacaacacctgaagaaactcaactcaggcatggagaac
aagatcgtccagatgcagaggaagatggacgaccagtccaaagagtaccgcactcagaac
gagcagctgcagatagtgaatgtcagtctggggtcagaggtcaacaagctgcagaaggag
ctggaccagatccggggtcagcaaggggaggggagtcagctgacctcgctgcaggaggag
ctacagaagctgagggaggagctacaggaggcgcacgcccacaggaagaggctggaggat
gagcacggcaccgagaaactggacctcagacagagggtggaggagctggaggctgaaaac
tctctgctgaagagcgagaaggatgaaatgaaccagaggatcctgcagctgtccaacagc
agcacagacggcagcagtgtgtctcagagggaggagtctctgggggcggagctggacgca
gagaggcagcggtaccagaacctcctcaaagagttctccagactggagcagagatacgac
aacgtgaaggaggagctgtccctcaccaagttccaccccggccacaggaggaacccgtcc
aatcagagcagcctggagtcggactctaactacccgtccatctccacttccgaggtcgga
gacaccgaggacgccgtccagctggtggaggagctgggggtggagaaagctgcgatggac
atcagtctgttcatgaagctgcagaaacgagtccgagagctggagcaggagaggaagagg
ctgcagctcaacgtggacaagatggaggagctcgccaagcgccggggctcggaggtgaag
agtcccacctctcagcaggagactgcagatctggcctacaacaacctgaagaggcaggag
ctggagtcagagaacaagaaactgaagaacgacctgaacgagctgaggaagaccattgct
gaacgtgcgtctcaaaacaactcgtccaatgagctgcaggacagctacaatctgctgctc
agccagctcaaagcagccaatgaggagctggacgcccgcaaggaggaggtgctcatcctc
aggactcagattgtcagcacagcccagctacaggagaagaaccaacatatagaggagagt
aataatgttcctgaggtggagaacagtaaagaacccgtggacaaagaggaggctctcaga
gcgtatcatggactgtgtgactctaaaaagctgctggaggcccagctgcagtctcagtcc
aggcagcacaaagacgagctggaggctcttcacactcagatcgagctgctgaaagacgac
attgagaagaagcaggagatcctcaactacaccatgtctctttccccggaggcgcaggtg
gagtacagcgtccagcaggagatcacacggctcaccaacgacaacctggacctcaaggag
ctggtggagaaactggagaagaacgagaggaagctgaagaagcagctgaggatctacatg
aagaaggttcaggagttagaagcctctcatgcggccgctcagaccagcaggtccagacct
gaactgagtcggcaggtcacggtccagaggaaggagaaggactttgaggggatgctggag
ttctacaaggaggacgaggctctgctggtgaagtttctgatcacagacatcaagcctaac
acggtgtcagccaccgtcccctgtctgccggcgtacattctcttcatgtgcatccgccac
gccgactacatcaacgacgaccagaaggtggagtctctactcacctccaccatcaacgcc
atcaagaaggtcctcaagaagaacaacgaggacttcgagatgacgtccttctggctcgcc
aacaccagccgtctgctccactgtctgaagcagtacagtggagatgaggtgtttatgact
cagaacacagtgaagcagaacgaacactgtctgaagaactttgacctggccgagtaccgg
caggttctcagtgacctctccatccagatctaccagcagctcatcaaggtcgccgaggca
accatccagcccatgatcgtgtcggccatgttggagagtgagagtatccccagcctggcg
ggcgtgaagccgatgggttacaggaaccgttcgtccagcatggacacagacgccggcggt
cccagcagctacacgctggaggccctgatcagacagctgggacagttccacgccatcatg
agggaccacggtctggaccccgagatcgtgggtcaggtggttcgtcagctgttccactgc
atcaacgccgtcactctcaacaacctgctgctgcgcaaagatgtctgctcctggagcacc
ggcatgcagctccggtacaacaccagtcagatggaggagtggcttcgggggaacaacctg
tatcagagtaaagcagcagcaactctggagccgatcattcaggccgctcagctgctgcag
gtgaagaagaaaacgtctcaggacggcgaggccatctgctcgctgtgctccgccctcacc
acccagcagattgtgaagatcctgaacctatacactcctctgaacgagttcgaagaaaga
gtcactgtgtcgttcatcagaaacatccagaaccgtcttcaggagaggaacgaccctcct
cagctcctggtggacaccaaacacaccttccccgtcctcttcccctacacgccctccgcc
ctgagcctggagacgctgcacatccctgcctcgctcggcctggacttcctcatcagagtc
tga
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integrated database retrieval system
