Seriola dumerili (greater amberjack): 111238724
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Entry
111238724 CDS
T05606
Symbol
zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111238724 (zc3h13)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
111238724 (zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCCH_DUS3L
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
111238724
NCBI-ProteinID:
XP_022624100
UniProt:
A0A3B4VH55
LinkDB
All DBs
Position
Unknown
AA seq
1868 aa
AA seq
DB search
MSKIRRKVTVENSKTISDSSSSTTTSSTSNPAAPSRRPSVFERLGPSTGSNAADSHCRNW
LKTGNCSYGNTCRYTHGTQPRGKGFSFSRSTERPTGDLRERMKNKRQDVDPENLKRDLDE
PASPTARQRDSSRGRHREKEDIKITKERTPASEEEPTEWETNREDSDIGDYDYELSLEMK
RQKIQRELMKLEQENLEKREEIVIKKDETPTKTRTTSLPKASPEQLSSKDSPSSRKSSGS
PKHKSGTKGLGSGKKEKKTSISSPVSEPARSSKGSHSKKKGPRTPSPPPPVPLDIPVMGK
KHKGKHKNKEKSEEKQKEGKDRGRDTEKHKEKKEKRRDRSDSSHKAKRSVTSEERSGSVS
SPSRGASPSARKKSTSPKASSHKPSALASSPRRSPSPPRHQRSPTPPRHHSPSSHSGSSA
QRHSPSPPRRRRSSSPAYHRSNAAGASSPQSSRRSRSPPASHDASSPHRRSDRSSPSRHH
SRGRERSRGDRERSPPAQERRHERRDDSRSKREKDSVRDDRDYDSEQVSSRDARDDRETR
EARERRDRGRETTRDSRDHRDNRDVKDSRESRTDTRSSRESLERRDRERERERDREKERE
KDREREKERERERTDTHRKEEMSQDDRSYGRGHGREEGGRAEGRTENRTDRAERNGRGRG
RANETSDKGSNRNSRGSQLESTHDSWESRSSAVRERSVERSADRSATERSSERGSDRDRY
EGDRRGEQARDSSYDRRGGHGERDRRDNRERDPRAASPNRHQGRSEEPEREERREDRRTD
RLEERRDDRNRDRERERDRERDREREREKEKDREREREREREREREKEREKEREAAERER
AREREREREREREREREREREREERERERERKEREREREQRERERQREWEERERGREERR
ERRDETREDRSVRETRDDRKTSRKRPRVESSPSPRSSPKRRDHSPADSDGYNSAEDKSER
PIGRGQAKLHPQPLLPSPVCPPPSDSGDKHRLLSQVVRPQEPLLRSPPRAAPPDDKLGHW
KDEERRGAGDKRETRSRHEELEPRVERSRGGDRRADHLSDVPSDSRNRGRDQRESTPPPP
PPPPPSALATGSDDRDTASSLSHEEGKKKTKAQRKGLKKGRKDEEISGVNSLAAVGDRFN
LEPPASVSADGPPPLHSPRKVAKKKALDRKRKRSRGGESDVSEEDTSAHQPHSKRKRGPR
TPPPSMRPDHRGTGGNTEPSPLSKMDNFSDWSDEEVTDRGGGPLETHPPLAPAEPLRRGG
GPRMGRDRERCNPPPIAPLLPQDPPMLLQTLTPQPLMSQPLLRKPPPEQTRSSSMGSNQS
RTSSRRLRSPSNESAHRDDLQGARSRRGRLQGTNSRDRDRERERERERERERERERERPV
VNDPPGAERKSRIDQLRRGEPSRSTSSDRQDSRSHSSRRSSPDSERQTRSRSRAGSYDSR
ERERDREPFERERDRKDLRPQQQQQQQPPLLLQQPLQQQRDWEPEPRDWPSRGREPLLMR
PGREPLLRERDIRDRERLLPEGLIQQHERERERDRERERDSRGERGVDRERERMMMMDLP
PHGDPRAPGRGDLRGEMRGDVRGDMMRQDRSDYEPLLPREAFSPPEPEKASNSHHLMGDQ
RERELEKADSIDGDDDGKEDDGQSVASVGEEYEPISDDELDEILADSQKKEDQQDDEKIT
GPLDVIDVDWSSLMPKQKQEPRAAGAALLRFTPGAVLLRAGISKRLAGPALLEQVKEVCK
SELDDPKDADKLFEHDLGALNMAALNRRVERAGLLSNLGPCCKALCARRDFAIRRQLLKN
DKGLTKQYPTTPVVDNELLQMSMRLFRRTMAGTASAPEKSDSGSAPAAEVAAAVSSKLST
AQPEVCVS
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcaggcggaaagtaacagtggagaattcaaaaaccatatctgacagcagc
agcagcaccacgaccagcagcaccagcaaccccgccgccccctcccgtagacccagcgtg
tttgaaagacttggtcccagcactgggagtaatgctgctgatagtcactgtagaaattgg
ttgaagaccggtaattgcagttacggcaacacttgtcgctacacacatggaactcagcca
cgaggcaaaggatttagctttagtcggtcaaccgagaggcccacaggtgatctgcgggag
aggatgaagaataaaagacaggatgttgacccagaaaacctgaagcgagaccttgacgag
cccgcatcccccacagcaagacagagagactcctccagaggccgacacagggagaaggag
gacataaagatcacaaaggagcgcaccccagccagtgaagaagaacccacagagtgggaa
accaatcgtgaagattcggatatcggtgactacgactacgagttatccctagaaatgaag
cgccagaagattcaacgtgagctgatgaaactggagcaggagaacctggaaaagagggag
gagattgtcatcaagaaagatgagacccccactaaaacaagaaccacctccttgccgaag
gcctccccggagcagttaagctctaaagattcaccctcatccaggaagtccagtggctcc
ccgaaacacaaaagtggaaccaaagggctaggctctggaaagaaagagaagaaaacatcc
atttcctcccctgtttcagaacctgccaggtcttcaaaagggagccatagtaaaaagaaa
gggccccgcacccccagtcctcctccccctgtccctctggacattcctgtgatggggaag
aaacacaaaggcaagcacaaaaacaaggagaagtctgaggaaaagcagaaagaagggaaa
gatcggggacgagatacagagaaacacaaagagaagaaggagaaacgcagggaccgatca
gacagttcccacaaagccaagcggtcagtgacatcagaggagcgttctggtagtgtttcg
tctccctccagaggtgcttcaccctcagcccggaagaaatccacctctcctaaagcttcg
tcccataaaccctctgcactggcctcctctcctcgcaggtctccctctcctccacgccac
cagcgcagtcccactcctccccgccaccactccccttcctcccactccggctcctccgcc
cagcggcactctccttctcctccccgtcggcgtcgctcgtcctctcccgcctaccatcgg
agcaatgcagcgggagcctcctcaccgcagagctccagacgctcccggtcacctccggcc
tcccacgacgcctcctcgccccaccgccgatctgacaggtcgagccccagccggcaccac
tccagaggcagagagaggagccgtggtgacagagagaggagtccgccggcccaggagcgc
agacatgagcgcagagatgatagccgcagcaagcgagagaaagacagtgtccgtgacgac
cgggactatgactctgaacaggtttcatcacgagacgctagagacgacagggagacgaga
gaggctcgcgagcgccgggatcgaggaagggaaactaccagagactctcgcgaccacaga
gacaacagggacgtaaaggactccagagaaagcaggacagacacccggtccagtcgagag
tccctggagcgtcgggaccgtgaacgggaacgagagagggaccgggagaaggagagggag
aaggacagggagcgagagaaggagcgagagagggagaggaccgacacccacaggaaggag
gaaatgtctcaggacgacaggagttatgggagaggtcatggtcgtgaagagggagggaga
gctgagggaaggacagagaacaggacagacagagctgagaggaacggacgagggagaggg
cgtgctaatgaaacatctgataaaggctcaaacagaaactcccgtggttcccaactggaa
agcacccatgatagctgggagtctcggagcagtgcggtgcgcgagcggagtgtggagagg
agcgcagatcgcagcgctactgaaagaagctctgagaggggttcagaccgagatcgctat
gagggtgacagaagaggagagcaggcccgggactcctcttacgacaggagaggagggcac
ggagagcgggatcgcagagacaaccgagagagagatccaagagcagcttccccaaacagg
caccaggggcgatcagaggagcctgagagggaggaaaggagggaggaccgcaggacagat
agactggaggagagacgggacgaccggaaccgcgaccgagaacgagagcgagacagggag
agggacagggagcgggagagagagaaagagaaggacagagagcgggagagggagcgggag
agggagagggagagagagaaggagcgagagaaggaaagggaggctgcggagagggagcgg
gccagggagagagagcgggagcgggaacgagagagggagcgggagcgcgagagagaaagg
gaacgcgaggagcgggagagagagagggagaggaaagagcgagaacgggagagggagcag
agggagcgggagaggcagcgggaatgggaggagagggagagaggaagggaggagaggcgg
gaaaggagagatgagaccagggaagaccggtctgttcgagaaacccgggacgatcgcaag
acaagtcgtaagaggcccagggtggagagcagcccgagcccccgctcctcaccaaagcga
cgcgaccacagtccggcagacagcgacggctacaacagcgcggaggacaaaagtgagcgc
ccgattggccgagggcaggccaagctccacccacagcccctcctccccagcccagtgtgt
ccgcctccatctgacagtggcgataagcatcgtctgctgagccaggtggtgcggccccag
gaacccttgttgcgttcaccaccgagagctgctccacctgatgacaagctgggtcactgg
aaggatgaggagcgcagaggagccggggacaaaagggagacacgcagccgccacgaggag
ctcgagcctcgtgtggaacgcagccgaggaggcgacagacgagctgaccacctttcagat
gttccgtctgactcccgcaacagaggcagagaccagcgagaatccacgccgccgccacct
cctcctcctcctccttcggccctcgccactggcagtgacgatcgtgacaccgccagctcc
ttgtcccacgaggagggcaaaaagaagacaaaggcgcagaggaaggggctaaagaaaggt
cgcaaagatgaggagataagcggtgttaacagcctggctgctgtaggggaccgcttcaac
ctcgagcccccagccagtgtttctgcagatggacctccacccttgcactctcccaggaaa
gtagccaagaaaaaggcgcttgaccgaaagaggaaacggtcacgaggaggagaatctgat
gtgtctgaggaggatacttcagcccaccagccccatagtaagaggaagagaggtccccgg
accccaccaccctcgatgaggcctgatcaccgcggcactggaggcaacacagagccgtct
cccctgtccaaaatggacaacttcagtgactggtcagatgaggaggttacagaccgagga
ggaggaccacttgaaacacatcctcccttggctcctgctgaacctctaaggagaggtggc
ggtccaaggatgggcagggacagggagaggtgcaaccccccacccattgcccctctactc
cctcaggatcctcccatgttgctgcagactctgactccacagcccctcatgtcccagccc
ctgctgcgcaagccccctccagagcagacgcgcagcagcagcatggggagcaaccagagc
cgcacatcatccagacgcctgcgatcaccctccaacgagtcggcccaccgagacgacctc
cagggtgcacgatcccgccggggaaggctgcagggcaccaactctcgcgaccgggatcga
gagagagaaagagaacgagagcgggaaagggagagagagcgggagagagaaaggccggtc
gtaaatgaccctcctggggccgagaggaagtctcgaattgaccagttgaggagaggagag
cccagccgcagcacctcatcagaccggcaggattctcgcagccacagctccagacgcagc
tctcctgactctgagaggcagaccaggtccaggtcccgcgccggttcgtatgacagtcga
gagcgggagagagacagggagccgtttgaacgggaacgagaccgaaaggatctccggcct
cagcagcagcaacagcagcagccgcccctgctcctacaacagcccctccaacaacaaaga
gactgggagcccgaaccgagggactggcccagcaggggacgagagcccctgctaatgcgt
cctggccgtgaacctctcctgagggagcgggacatcagggacagggaacgcttactccct
gaaggactcatccagcagcatgaacgggagcgggaaagggatagggagcgggagagagac
agtagaggtgaaagaggcgtcgatcgagagagggagaggatgatgatgatggacctaccg
ccccacggggaccccagggctccaggacgaggggacctgaggggagaaatgagaggagac
gtgcgaggggacatgatgaggcaggacaggagtgactatgagcctctgctgccaagagaa
gccttcagccctccagagcctgagaaagcgagcaacagtcaccatctcatgggagatcaa
cgagaacgggagctggagaaggcggacagcatcgacggagatgatgatggtaaagaagac
gatgggcagtcagtcgcatctgttggagaggagtacgaaccaatcagtgatgacgagctg
gatgaaattctggctgatagccagaaaaaggaggatcagcaggatgatgaaaaaattaca
ggtcctctggatgtgatcgatgtggactggtccagcctgatgcccaaacagaagcaggag
ccgcgggcagcaggggcagcattgctacggttcaccccaggggctgtgcttctcagggca
ggcatctccaaacgacttgctgggcctgcgctcctggagcaagtcaaagaggtgtgcaag
tctgagctggacgacccgaaagatgctgacaagctgttcgagcatgaccttggggccctg
aacatggcagccctgaacaggcgggtggagagggcaggtttactgagcaaccttgggccc
tgctgcaaggccctgtgtgcccgcagggactttgccatccgccggcaactgttaaaaaat
gacaagggcctaacaaagcagtaccccactacacccgtagtagacaacgagctgctgcag
atgagcatgcgtctcttcagaaggaccatggccggcacggcttcggccccagaaaagtcc
gacagtgggtcggcaccagcggccgaagttgctgcagctgttagtagtaagctcagcaca
gcacagcctgaggtgtgtgtgtcctga
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integrated database retrieval system
