Seriola dumerili (greater amberjack): 111238737
Help
Entry
111238737 CDS
T05606
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111238737
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
111238737
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1
UBA_N4BP1_C
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
111238737
NCBI-ProteinID:
XP_022624123
UniProt:
A0A3B4VHC7
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MGQKDHVEAGAGHILDLGLDLEYLHVAGADRQAGGADGPPAMEEQGESSCNRSTADSPPP
AAVEENAGPDAESKLAPSPGSALAAGPEGGEGGSTHSKNTHQPLCRTQCVDLGTEGPPEL
PSELLSELEYDTPAQSPPSSPCKNPPELPSHPSESEPASEAGGKEYQAKLEFALKLGYSE
EIVRLVLSKLGPDTLINDILGELVKLGTKSDSEQPAGSLASTSSSSSSSSSCGCSDLLDG
QRSDSPCPSDSLCDQDNLRPIVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHHDITV
FVPAWRKEQSRPDAPITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESD
GIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKRPV
MPEQKKQPCPYGKKCTYGHKCKYYHPERGAQPQRAVADELRASAKTCVTTKNQGDTGLVK
SHSVPAGSIEAKKGAPKRQSDPSIRALSYSDAEEKLLAKGRVESQKSSLCGAGSSSSSSS
SSNSSNCSGSITMSPAPGGPPSSLSLPQDQQSRAATPHGLLPAPSHDLYPHCESPDLSYY
SVTRAYSGLSLSSRRSPDCRFPNDTDLRLGSMGSAGSECGSESSASCGSSCDSYSERPCP
GCPPDTLLEDSMHFNNPHSRLYPHHSSSNHELCGLHPADYTNIQHSHTSNTSVHSYHMSV
TRGQSCAHDQPPPEAPSKRPLYPLPPHLQHQPLTARSSCPGDYHSLPQSNPHAPGSPLGR
CLAPTRAESVSDSHLYEHLSTSHHHHRPKALPSWDTYYRQPPLPPSRYEPSAYQSLPDTR
QSSWHTLPWSQDGYTQHHSSHPALHPSPTHYLNHPPPPTHSPHPPHPSSTPLPAYPPHST
HLAVPSHAPSSYMPQHSESPAHGHYGDVREKVYVNLCNIFPSELVSRVMARSPHNTDPQQ
LAAAILAEKAQTGY
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagaaggaccatgtggaggcaggagctggccacatcctcgacctggggctggat
ttggagtatctccacgtagcaggggctgaccggcaggctggcggcgctgacgggccccct
gctatggaggagcagggggaaagctcctgtaaccgcagcaccgccgattcccctccgccg
gctgcggtggaggaaaatgccggacccgacgccgagagcaagctggcgccgtctcccggc
tctgccctcgctgccgggccggaaggaggagagggaggatcaactcacagtaagaacacc
caccagccgctttgtcggacccagtgtgtggacttaggcaccgaggggcctcctgagctc
ccatctgaactcttatcagagcttgaatacgacactcctgctcagtccccacccagctcc
ccctgtaaaaacccacccgagctgccgtcccatccctccgaatcagagccagcgtccgag
gctggcgggaaggagtaccaggccaagctggagtttgccctgaagctgggctactctgag
gagatagtgcgactggtgctgtccaagctgggccctgacaccctcatcaatgacatactg
ggagagctggtcaaactgggcaccaagtcagacagcgagcagccggctggatcattagcc
tctacctcctcctcttcatcctcctcttcatcttgtggttgctctgatttgctggacggc
cagaggtcggactcgccctgtccgtcagactctctgtgtgaccaggacaacctgcgtccg
attgtggtggacggcagtaatgtagccatgagtcatggcaacaaggaagtgttttcgtgc
cagggcatccagctggctgttgattggttcctagagcgaggccatcatgacatcacagtg
tttgtgcctgcctggaggaaagagcagtcccgccctgatgccccgataacagatcaggag
atcttgcgtcgcctagagaaagaaaagatcttagtcttcactccctcacgacgcgtccaa
ggtcggcgcgtggtctgctatgacgaccgcttcatcgtcaagctggcctatgagtcagac
ggcatcatcgtctccaacgacaactacagagacctggctaatgagaagcctgagtggaag
aagttcattgacgagcggctgctcatgtactcctttgtcaacgacaaattcatgccccca
gatgaccctcttggtcgtcacggccccagcttagacaacttcctgaggaaaagacctgtc
atgcctgagcagaagaaacagccgtgtccttacggaaagaagtgcacttacggtcacaag
tgtaagtactaccacccagagagaggggctcagcctcagcgtgccgtggctgatgagctg
cgagccagcgccaagacctgtgtgaccacaaagaaccagggagacactgggctggtgaag
agccacagtgtgccagctggaagcatcgaggcaaaaaaaggtgccccgaaaaggcagtca
gaccccagcatccgagctctgtcgtacagtgacgctgaggagaagctgctggcaaaaggg
cgggtggagagccaaaagagcagtttgtgtggtgctggtagcagcagcagtagcagttct
agcagcaacagcagtaattgcagtgggagtatcaccatgtccccggccccaggaggccct
ccatccagccttagccttccccaggaccaacagtccagagcagccactcctcacggcctc
cttccagcccccagccatgacctttaccctcactgtgagtcccccgacctgagctactac
tcagtaacacgtgcctactctggcctgagcctgtcctccagacggagccccgactgtcgc
ttccccaacgacacagacctgcggttgggctcgatgggctcagcaggctccgaatgcggc
agcgaaagcagcgcgagttgtgggagcagctgtgactcgtacagcgagaggccttgtccc
ggatgccccccagacaccttactggaagacagcatgcatttcaataatccccacagtcgg
ctgtatccccaccattcttcatcaaaccacgaactctgtggccttcatcctgccgattac
acaaatatccagcacagccacacgtctaacaccagcgttcacagttaccacatgagtgtg
acacgtgggcagagctgtgctcatgatcagcctccaccagaggctccctccaagcgcccc
ctctaccccttaccccctcatctgcagcaccagccgctgaccgcacgctccagctgcccg
ggcgactaccactctctgccccagtccaacccccacgcccccggttctcctcttggccgc
tgcctggcccccacgcgagcagagagcgtgtcagactcacatctgtatgagcacctctct
acgtcgcaccatcaccaccgaccaaaagctctgcccagctgggacacatactacagacag
ccgccgctgccaccatccaggtatgaaccgtctgcctatcagagtctgccagacacacgc
cagtcctcctggcacacccttccctggtcacaggatggctacacccagcaccactcctct
cacccagctctccacccgtccccgacacattacctaaaccacccaccacctcccacccac
tctcctcacccacctcatccatccagcactcctctgccggcttacccgcctcacagcact
cacctcgcagtgccctcccacgcaccttcctcctacatgccgcagcactctgaatcccct
gcacatggccactatggcgacgtgagggagaaagtgtacgtcaacctgtgcaacatcttt
ccctctgagctggtgagtcgggtgatggccaggagcccccacaacacagacccccagcag
ctggcagccgccatcctggcagagaaggcacaaacaggctactga
DBGET
integrated database retrieval system