KEGG   Seriola dumerili (greater amberjack): 111238737
Entry
111238737         CDS       T05606                                 
Name
(RefSeq) probable ribonuclease ZC3H12C
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sdu  Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdu03019]
    111238737
Messenger RNA biogenesis [BR:sdu03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     111238737
SSDB
Motif
Pfam: RNase_Zc3h12a Regnase_1_C UBA_6 zf-CCCH_4 UBA_N4BP1 UBA_N4BP1_C zf-CCCH_2
Other DBs
NCBI-GeneID: 111238737
NCBI-ProteinID: XP_022624123
UniProt: A0A3B4VHC7
LinkDB
Position
Unknown
AA seq 974 aa
MGQKDHVEAGAGHILDLGLDLEYLHVAGADRQAGGADGPPAMEEQGESSCNRSTADSPPP
AAVEENAGPDAESKLAPSPGSALAAGPEGGEGGSTHSKNTHQPLCRTQCVDLGTEGPPEL
PSELLSELEYDTPAQSPPSSPCKNPPELPSHPSESEPASEAGGKEYQAKLEFALKLGYSE
EIVRLVLSKLGPDTLINDILGELVKLGTKSDSEQPAGSLASTSSSSSSSSSCGCSDLLDG
QRSDSPCPSDSLCDQDNLRPIVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHHDITV
FVPAWRKEQSRPDAPITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESD
GIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKRPV
MPEQKKQPCPYGKKCTYGHKCKYYHPERGAQPQRAVADELRASAKTCVTTKNQGDTGLVK
SHSVPAGSIEAKKGAPKRQSDPSIRALSYSDAEEKLLAKGRVESQKSSLCGAGSSSSSSS
SSNSSNCSGSITMSPAPGGPPSSLSLPQDQQSRAATPHGLLPAPSHDLYPHCESPDLSYY
SVTRAYSGLSLSSRRSPDCRFPNDTDLRLGSMGSAGSECGSESSASCGSSCDSYSERPCP
GCPPDTLLEDSMHFNNPHSRLYPHHSSSNHELCGLHPADYTNIQHSHTSNTSVHSYHMSV
TRGQSCAHDQPPPEAPSKRPLYPLPPHLQHQPLTARSSCPGDYHSLPQSNPHAPGSPLGR
CLAPTRAESVSDSHLYEHLSTSHHHHRPKALPSWDTYYRQPPLPPSRYEPSAYQSLPDTR
QSSWHTLPWSQDGYTQHHSSHPALHPSPTHYLNHPPPPTHSPHPPHPSSTPLPAYPPHST
HLAVPSHAPSSYMPQHSESPAHGHYGDVREKVYVNLCNIFPSELVSRVMARSPHNTDPQQ
LAAAILAEKAQTGY
NT seq 2925 nt   +upstreamnt  +downstreamnt
atgggtcagaaggaccatgtggaggcaggagctggccacatcctcgacctggggctggat
ttggagtatctccacgtagcaggggctgaccggcaggctggcggcgctgacgggccccct
gctatggaggagcagggggaaagctcctgtaaccgcagcaccgccgattcccctccgccg
gctgcggtggaggaaaatgccggacccgacgccgagagcaagctggcgccgtctcccggc
tctgccctcgctgccgggccggaaggaggagagggaggatcaactcacagtaagaacacc
caccagccgctttgtcggacccagtgtgtggacttaggcaccgaggggcctcctgagctc
ccatctgaactcttatcagagcttgaatacgacactcctgctcagtccccacccagctcc
ccctgtaaaaacccacccgagctgccgtcccatccctccgaatcagagccagcgtccgag
gctggcgggaaggagtaccaggccaagctggagtttgccctgaagctgggctactctgag
gagatagtgcgactggtgctgtccaagctgggccctgacaccctcatcaatgacatactg
ggagagctggtcaaactgggcaccaagtcagacagcgagcagccggctggatcattagcc
tctacctcctcctcttcatcctcctcttcatcttgtggttgctctgatttgctggacggc
cagaggtcggactcgccctgtccgtcagactctctgtgtgaccaggacaacctgcgtccg
attgtggtggacggcagtaatgtagccatgagtcatggcaacaaggaagtgttttcgtgc
cagggcatccagctggctgttgattggttcctagagcgaggccatcatgacatcacagtg
tttgtgcctgcctggaggaaagagcagtcccgccctgatgccccgataacagatcaggag
atcttgcgtcgcctagagaaagaaaagatcttagtcttcactccctcacgacgcgtccaa
ggtcggcgcgtggtctgctatgacgaccgcttcatcgtcaagctggcctatgagtcagac
ggcatcatcgtctccaacgacaactacagagacctggctaatgagaagcctgagtggaag
aagttcattgacgagcggctgctcatgtactcctttgtcaacgacaaattcatgccccca
gatgaccctcttggtcgtcacggccccagcttagacaacttcctgaggaaaagacctgtc
atgcctgagcagaagaaacagccgtgtccttacggaaagaagtgcacttacggtcacaag
tgtaagtactaccacccagagagaggggctcagcctcagcgtgccgtggctgatgagctg
cgagccagcgccaagacctgtgtgaccacaaagaaccagggagacactgggctggtgaag
agccacagtgtgccagctggaagcatcgaggcaaaaaaaggtgccccgaaaaggcagtca
gaccccagcatccgagctctgtcgtacagtgacgctgaggagaagctgctggcaaaaggg
cgggtggagagccaaaagagcagtttgtgtggtgctggtagcagcagcagtagcagttct
agcagcaacagcagtaattgcagtgggagtatcaccatgtccccggccccaggaggccct
ccatccagccttagccttccccaggaccaacagtccagagcagccactcctcacggcctc
cttccagcccccagccatgacctttaccctcactgtgagtcccccgacctgagctactac
tcagtaacacgtgcctactctggcctgagcctgtcctccagacggagccccgactgtcgc
ttccccaacgacacagacctgcggttgggctcgatgggctcagcaggctccgaatgcggc
agcgaaagcagcgcgagttgtgggagcagctgtgactcgtacagcgagaggccttgtccc
ggatgccccccagacaccttactggaagacagcatgcatttcaataatccccacagtcgg
ctgtatccccaccattcttcatcaaaccacgaactctgtggccttcatcctgccgattac
acaaatatccagcacagccacacgtctaacaccagcgttcacagttaccacatgagtgtg
acacgtgggcagagctgtgctcatgatcagcctccaccagaggctccctccaagcgcccc
ctctaccccttaccccctcatctgcagcaccagccgctgaccgcacgctccagctgcccg
ggcgactaccactctctgccccagtccaacccccacgcccccggttctcctcttggccgc
tgcctggcccccacgcgagcagagagcgtgtcagactcacatctgtatgagcacctctct
acgtcgcaccatcaccaccgaccaaaagctctgcccagctgggacacatactacagacag
ccgccgctgccaccatccaggtatgaaccgtctgcctatcagagtctgccagacacacgc
cagtcctcctggcacacccttccctggtcacaggatggctacacccagcaccactcctct
cacccagctctccacccgtccccgacacattacctaaaccacccaccacctcccacccac
tctcctcacccacctcatccatccagcactcctctgccggcttacccgcctcacagcact
cacctcgcagtgccctcccacgcaccttcctcctacatgccgcagcactctgaatcccct
gcacatggccactatggcgacgtgagggagaaagtgtacgtcaacctgtgcaacatcttt
ccctctgagctggtgagtcgggtgatggccaggagcccccacaacacagacccccagcag
ctggcagccgccatcctggcagagaaggcacaaacaggctactga

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