Seriola dumerili (greater amberjack): 111238894
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Entry
111238894 CDS
T05606
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111238894 (npas1)
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
111238894 (npas1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
SAGA-Tad1
Motif
Other DBs
NCBI-GeneID:
111238894
NCBI-ProteinID:
XP_022624335
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MATMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRTFASQGDPPWSPLLEGDSNCSKVRRSSHSLA
TDMFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCHTAPESASSSASTSSLAGTPEPAPSSPHSPADEPPDRGFF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSTRSMRRPMGLVALAHTLPPSTL
NEVRMESHMFVFRVNMDLQVTYCENRISEYMDLTPAEVVGHTCYHFIHVEDLENLRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWIQSTATVSINHKAPHERNVIWVNYVLSRTELPDTPL
DLLQLPESVRAERLRVSSSPTDSSPQARGSSGSQPVKGSLGKSDHDTKGREKFSAAAIQS
EDRRKRLLRSDPEGAPPETRRRLEELRHTEESVSASSDLASESDGEEEEETEWDQGGDSD
RLKQEDGGGGGKQSRGGDTPTRGERGGRAHNGRAVIQQLKSVVTPSPLSGSPSIKTEHDS
LTTGGRWGSHTQTSTSHTTQPQPSHAHTPSSSLNGDSPTTPIPDSSSSSEAPPKGLFTPP
SPALSPAMSVSSPLPREERVVSGVVSRGSGGSGGGGGAPDFELLQRLAAGGAAGRVLFHP
LALGPQGPQSLYAPSTIRYAPPELPPSHHHSAGHSDGLQLRSDHHKGPPPAFFPHLQRLA
GLPPFSGFSPSDSPFSSGLPFCMNGLRGAAGSEED
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatgccgtttgtcagcgaggggaagtgtgtgagtgtggagtgggatttccta
caaggactactggccaagcctcccaccctgccctgtctccagaacctgcgtaaagagaag
tctcgcaatgcggctcgttcacggcgggggaaggagaatttcgagttcttcgagctggct
aagatgctgcctcttcccggggccatcaccagtcagctggacaaagcctcggtcatccgg
ctgaccatcagctacctgcacatgcgcacctttgccagccagggggacccgccctggagc
cctctgctggagggcgacagcaactgcagtaaagtaagacgatcatctcattctctggct
actgacatgtttgagcagcacctaggggcgcacctactgcagtctctggatggttttgtg
tttgtggtcagccaggagggacggttcctctacatctcagagacagtttctatctacctg
ggactctcacaggtggagctgaccggcagcagtgtgttcgactacatccacccagcggac
cacgtcgagatggcggagcggctgggaatcaggccgcatcttagggccgaggccggctgc
cacacggcgcctgagagcgcttccagctccgcatccacctcctccctggctggtacccct
gagcccgctccgtctagtcctcactctcctgctgacgagcctcctgatcgcggtttcttc
atccgcatgaagtccacgctcaccaaaagaggcctgcatgtcaagtcttctggatacaag
gtaatccacgtgacaggacgaatccgctgccgccccgcacttgtgccgggctccacgcgt
tcaatgcgtcgaccgatgggtctggtggcactggcgcacacacttccgccctccacgctt
aatgaagtccgcatggagagccacatgtttgtcttccgagtgaacatggacctacaggtc
acatattgtgagaacaggatctcagagtacatggatctgaccccagcagaggtggtaggt
cacacctgctaccacttcatccatgtagaggacctggaaaaccttcggcaaagccatgaa
gacttgctgagaaaaggccaggtagtgacgggttactatcgctggctccagaggagagga
ggctacctgtggatccagtccactgccactgtctccatcaaccacaaagccccccacgaa
cgcaacgtcatctgggtcaactatgtcctgagtcgaacagagttgcccgacactcccctg
gatctactgcagctaccagagagcgtaagagcagagagacttcgggttagctcctctccc
accgacagctccccccaggccagaggtagctcaggctcgcagccagtgaagggctcattg
gggaagagtgaccatgacactaaaggcagagagaaattctctgccgctgccatccaatca
gaggacaggaggaagcgcctgctgaggtccgaccctgagggagctcctcccgaaacccgc
cgcagactggaggaactccgtcacaccgaggagagtgtatcagcctcctccgacctggcg
agcgaaagtgatggggaggaggaggaagaaacagagtgggaccaggggggagacagtgac
agactgaaacaagaagacggtgggggaggaggtaaacagagtagggggggagacaccccg
actagaggggagagaggagggagggcgcacaacggccgggctgtgatccagcagctgaag
agtgtagtgaccccctctcccctgtctggcagccccagcatcaagactgaacatgactcc
ctgaccaccggggggcgctgggggtcacacacacaaacctccacctcgcacaccacccag
ccccaaccctcacatgcacacacaccctccagcagtctcaacggcgacagccccaccacc
ccgatccccgactcttcctccagcagtgaagcccctccaaaaggtttgttcactcccccg
tcccctgctttgtcccccgccatgtccgtgtcctccccgctgccccgcgaggagagggtt
gtgtcaggggtggtcagtcggggcagtggtggcagcggtggtggaggtggtgctcctgac
tttgagctgctccagagactggctgcaggcggtgctgcggggcgggtcctcttccacccc
cttgcccttggcccacagggcccgcagagcctctacgcccccagcactatccgctacgct
ccacctgagctgcctccctcccaccaccacagcgcaggacacagcgatggcctgcagcta
cgctcggaccaccacaagggacccccgcccgccttctttccccacctacagcggctggcc
ggcctgccacccttcagtggtttctccccgtctgacagccctttctcctccggcctgccc
ttctgtatgaatggactgaggggggctgcaggctccgaggaggactga
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