Seriola dumerili (greater amberjack): 111239207
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Entry
111239207 CDS
T05606
Name
(RefSeq) ras and Rab interactor 2-like isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111239207
Membrane trafficking [BR:
sdu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
111239207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIN1
VPS9
RA
RA_2
FERM_f0
RA_3
Lpg0393_VPS9
TUG-UBL1
SH2
SH2_1
Motif
Other DBs
NCBI-GeneID:
111239207
NCBI-ProteinID:
XP_022624756
LinkDB
All DBs
Position
Unknown
AA seq
1099 aa
AA seq
DB search
MSSVSPPCRQERKGSFFKLIDSFAWELGTLKKELGKQPKPAEEDHSTDPVFRLSEEVRGL
FLQPSPCAGIRAGPAGARDSGYDSLHRRLSVLDRLVHTHAVWLQLSLSHQDAMLLLQNQE
AGMFVVRRSASLQRKVISLRMDQDSEEPVRDFPVRESQYTFSLEGSGLSFADLFRLVAFC
CISSSLSLSLFLRDVLPFTLKLPDVIASATTSADLEEVAKLGPGFWDTQLCRRRKDSVPV
SVTSAPDRLPSPAQTSVSLATGHSRLQTRTPTELECCQSNGALCFINPLFIKVHQPQSDQ
STTPDPSDTTQQGLREYPVINNRDGPQVWSSGLRDLQSLSKTTDLQDDTSHTSSSQKQSA
AEAVSRSPPPRPPPPRFVSRCSAPPVRQRSMPEKISWINIPKEKVEERERGSSLLSRLGS
SLSISPSSSPPKRLSISSPISISRPSLPLSLSSLSSSPRRAKASPSSSQEDAQCHLALEE
QTIEKALIKARLSQSSGTRSSTQDSSSPPQQSLMTAMKQSEIPGGEEEASEDCSGGGQRL
SDMSLSTDSSDSLDFSQSSAFFLPPLHDPSPPTTADLNTHLPLSIPPSHLPYCSIEDDDD
DDEEDEDEADYGVSLESDQDQDQDLTMVPPGHRTNRRPSAGALVLQKALRGHLRKMSGVF
NSLLTPEKRAVRRVLELSRDKGSYFGSLVQDYLSYMGEGAGTQAWQGYASGLELLQTLRQ
FITQMKSYLRQSSEMEPPIESLIPEDQIDQVLEKAMHKCVLKPLKPVVSAALQEFQVRSG
EWQELKENLSLAKARQPQDMGVADTLPPDQVAIEKIRHKFHTMCKLYSPEKKVSTLLRVC
KLIYTIMEDNSGRLYGADDFLPMLTYVLAQCDMPQLDNEILYMMELLDPSQLHGEGGYYL
TSAYGAMSLIRNFQEEQAARVLSSETRDTLHQWHRRRTTQRSAPSIDDFQNYLRVALQEL
DSGCTAKTLQVRPYATVDEVCQLCAQKFKVSDPQDYGLFLLMEGSSQQLAPDTHPQKIKA
ELHSRPQPPPFHFVFRRVANSSTLTSATPNLNNLTVTSDPQDNLNDLSRDLTGSSPQSTL
SLGLCPALSLSLAGGGLEV
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctgtcagtccgccctgcaggcaggagaggaagggcagtttcttcaagctgatc
gactcatttgcctgggagcttggcaccttgaagaaggagctggggaaacagcctaagcct
gcagaggaggaccacagcacagatccagtcttcaggctgagtgaagaggtgcggggtctc
ttcctgcagccctcaccctgtgctgggatcagagcaggaccagctggagccagagattcg
ggttacgactctctccaccggcggctcagtgttctggacaggctggtccacactcatgct
gtatggttacagctgagcctcagccaccaggatgccatgctcctcctgcagaaccaggag
gcagggatgtttgtggtgaggaggtcagccagcctgcagagaaaggtcatatctctacgt
atggaccaggactctgaagaacctgtcagagacttccctgtcagggagagccagtacact
ttctctctggaaggatcaggactgagctttgcagaccttttccgtctggtggctttctgc
tgcatcagcagctctctctctctctctctgtttctcagggacgtgttgcccttcactctg
aagcttccagacgtcatcgcctcagccacaacgtctgcagacctggaggaggtcgctaaa
cttggaccaggcttctgggacactcagctgtgccgcagaaggaaagactcagtcccagtg
tcagtgacatcagctcctgacagactgccctcccctgcccagacatcagtctccttggcg
acagggcactctcggcttcaaactcgcaccccaactgagctcgagtgttgccagtccaat
ggagcactgtgcttcatcaaccccctcttcataaaggtccaccaaccacagagcgatcag
agcaccacccccgacccctctgacacaacacagcagggcctgagggagtaccctgtcatt
aacaacagggacggtcctcaggtgtggagctcaggtctcagagacctgcagagcctcagc
aagactacagacctgcaggacgacaccagtcacaccagcagcagtcagaagcagagtgct
gcagaagctgtgtcccggtcccctccccctcgtccaccccctccacgttttgtttcgcgg
tgctcagccccccctgtccgacagcgcagcatgccagagaagatctcctggatcaacatc
cccaaagagaaggtggaggagagagagaggggcagcagcctcctctctcgtctgggctcc
tcactaagcatcagcccctcgtcctccccccccaagagactcagcatcagctcccccata
tccatctcccggccctccctgcccctctctctgtcgtccctctcctcctctccacgccgg
gccaaggcctcaccgtcatcaagccaggaggatgctcagtgccacctggcgctggaggag
cagacgattgagaaggcccttatcaaggccagactgtctcagagttctggtaccagatcc
agcacccaggactccagcagtcctccacaacagtcactgatgacagccatgaagcagtcg
gagataccaggaggagaagaagaagccagtgaggactgcagtggggggggccagcggttg
agtgacatgagcctgtccacagactcttcagactctctggacttctctcagtcctcggcc
ttcttcctcccccctcttcatgaccccagcccccccactacagctgaccttaacacccac
ctccccctctccatccccccgtcccatctgccttactgcagcatcgaggatgatgatgat
gacgacgaggaggatgaagatgaggccgactatggtgtcagccttgagagcgaccaggac
caagaccaggacctgaccatggtgccaccaggacaccgcaccaatcgacggcccagtgcc
ggcgctctggtcctgcagaaggcactgcgaggtcacctgcgtaagatgagcggcgtcttc
aactccctgctgacgcctgagaaaagggcagtccgccgggtcctggagctgtccagggac
aagggctcgtacttcggctccctggtgcaggactacctgagctacatgggcgagggggca
ggcacccaagcctggcagggctatgcctctggactggagctgctgcagaccctccgccag
ttcatcactcagatgaagagctacctgagacagagctccgagatggagccgcccatcgag
agcctgattcctgaagaccagatcgaccaggtcctggaaaaggccatgcacaagtgcgtg
ttgaagcctctgaaaccagtggtgagtgccgccctgcaggagttccaggtgcgcagcgga
gagtggcaggagctgaaggagaacctgtcgctggccaaggcacggcagccgcaggacatg
ggggtggctgacactctgcccccggatcaggtggccatagagaagatcagacacaagttc
cacaccatgtgtaaactgtactccccagagaagaaggtcagcacgctgctgagggtctgc
aaactcatatacaccatcatggaggacaactcaggtcgtctgtatggagctgacgacttc
ctgccgatgctcacatacgtgttggctcagtgtgacatgcctcagctggacaatgagatt
ctctacatgatggagctgctggacccctcacagctgcatggagaaggtggatactacctg
accagcgcctacggagcgatgtcccttatcaggaacttccaggaggagcaggcagccaga
gtcctgagctctgaaaccagggacacgctccaccagtggcaccgccgccgcaccacccag
cgctctgcaccatccattgatgacttccagaactatctgcgggtggcgctgcaggagctg
gacagcggctgcacagccaagactctgcaggtgcgaccgtacgccaccgtggacgaggtg
tgccagctgtgcgcgcagaagtttaaggtttccgaccctcaggactacggcctcttcctg
ctgatggagggcagcagccagcagctcgccccggacacccaccctcagaagatcaaggct
gagctccacagccgcccccagcccccccccttccactttgtcttccgccgggtggccaac
agcagcaccctgacatcagctacacctaacctcaacaacctcactgtgacctctgacccc
caggacaacctgaatgacctcagcagggacctgacgggctcgtccccccagtccactctg
agtttaggactgtgcccagctctgagtctcagcctggcagggggcggactggaggtttga
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integrated database retrieval system
