Seriola dumerili (greater amberjack): 111239703
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Entry
111239703 CDS
T05606
Symbol
rbck1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04217
Necroptosis
sdu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
111239703 (rbck1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
111239703 (rbck1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111239703 (rbck1)
Enzymes [BR:
sdu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
111239703 (rbck1)
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
111239703 (rbck1)
Multi subunit type E3
LUBAC complex
111239703 (rbck1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
Zn_ribbon_RanBP
zf-RING_5
zf-RING_2
zf-C3HC4_2
zf-C3HC4
IBR
zf-RING_11
ubiquitin
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
111239703
NCBI-ProteinID:
XP_022625316
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MLPVVSGVIMASQDAPTVYLKEAEELALALGEALSSGNSEEAVKLCQRLSQLSVPVSVSI
NSQAYPQDSIRLKVGVEDAQSDNYIPVNVVVSAGMTIAQLKDKISHDFGFHPLLQRWVIG
KRLAQDRDTLYNHGVRKDGDQAFLFILSAHAGHLTRHQHIQDQEQLRIEGIVESMESMQL
FPRGLGGGGGAKAAPPREPQQIYPTPPPKPPTAPKPAVPPKPQLGWACTSCTYVNKPTRP
GCEMCGGERPQDYKVPDIYQPDQQEVQRIQQEQLAMLQYEQAQQVEREKNYLYLLATEDQ
RLIPNATETDCPICFSTLEPGEGIVLRECLHTFCRECLRGTIVNSQDAEVSCPDKCDSKI
LDREIKALLTEEEHQRFLELRLSIAESRAEHSFHCQTPNCRGWCVYEDEVNEFHCELCDE
TNCILCRAIHEGMNCKDYQDDLRIRAENDQAAQQTKQMLESLLQNGEAMKCPRCDIIVQK
KDGCDWICCLMCKTEICWVTKQARWGPNGNGDISGGCRCRVNNQPCHPNCQNCH
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgttacctgtcgtttcaggcgtgatcatggcctcccaagatgcaccgacagtttatttg
aaggaggcggaggaactcgccctcgctctgggagaagccctcagcagtgggaacagtgaa
gaggctgttaaactgtgccagaggctgtcacaactctctgtcccagtgtctgtcagtatc
aacagccaggcctatcctcaggactccataaggttgaaggttggagtggaggatgctcag
tcagataactacatcccagtgaatgttgtggtttctgctggtatgacaattgcacaactt
aaagataagatcagccatgactttgggttccaccctttgctgcagcgctgggtcatcggc
aaacggttggctcaggaccgggacacgttgtacaatcacggtgtccgtaaagacggggac
caggctttcctgttcatcctctccgcccatgctggtcatctcacacggcatcaacacatc
caggaccaggagcagctacgaattgagggtatcgtggagtcaatggagtcgatgcaactt
tttcctagagggctaggcggaggtggtggtgcgaaggcagctcctcctcgagagcctcaa
cagatttatcctactcctcctcctaaacccccaactgctcctaaaccagccgtgcctcct
aaacctcagttgggctgggcctgtacttcgtgtacatacgtgaacaagccaacacgtcct
ggctgtgagatgtgtggaggggaacggccacaggattataaggtgcccgacatctaccag
ccagaccagcaggaggttcaacgaattcagcaggagcagctggccatgctgcagtatgaa
caggctcagcaggtggaacgagagaagaactacctgtacttgttggcaacagaagatcag
cgccttatccccaatgccacagagacagactgtcccatctgcttctctaccctggagcca
ggagagggcattgtgctcagggagtgtctgcacaccttctgcagggagtgtctaagaggg
acaatagtgaacagtcaagatgctgaggtgtcctgtcctgacaaatgtgacagcaagata
ctggacagagaaattaaagcgctgctcacagaggaagagcaccagcggtttctggagttg
cgtctgagcatcgccgagagccgcgcagagcacagcttccactgtcagactcccaactgt
cgagggtggtgcgtctacgaggatgaagtcaacgagttccactgtgaactgtgcgatgag
accaactgcatcctctgcagggccatccatgaaggcatgaattgtaaggactaccaggat
gacctgcgcatccgagcagagaacgaccaggcggctcagcagactaagcaaatgcttgag
agcctgctgcagaatggggaggccatgaaatgcccgcggtgtgacatcatcgtccagaag
aaagatggctgtgattggatctgctgtttgatgtgcaagacagaaatctgctgggtcacc
aaacaagctcgctggggaccaaatggcaatggtgacatatctggtggttgtagatgtcga
gtcaataatcaaccatgtcatcctaactgccaaaactgccactga
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