Seriola dumerili (greater amberjack): 111239753
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Entry
111239753 CDS
T05606
Name
(RefSeq) structural maintenance of chromosomes protein 6-like
KO
K22804
structural maintenance of chromosomes protein 6
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111239753
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
111239753
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
Laminin_II
AAA_15
SMC_hinge
ODAD1_CC
Tup_N
AAA_29
AAA_21
Crescentin
NPV_P10
DUF1664
AAA_13
FANCL_d1
Fez1
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
111239753
NCBI-ProteinID:
XP_022625383
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MSKRKSSSVSENPNKRVRPEQAEEEEDKDAADGDQDDPLMKQLQSAGEVVSDAGIVESIT
LKNFMCHSLLGPFTFGSNVNFVVGNNGSGKSAVLTALIVALGGNAQATNRGSSLKGFVKE
GESSADVSITLRNKGRDAYKPEVYGAAIIVDLRITREGLRTYKLRSKSGQIVSTKKEELL
SILDNFNIQVNNPVSVLTQEMSKYFLHSKGEGDKYKFFMKATQLDQMREDFVYIKTTKHV
TEDKVGQHSECLKDLKRKYLEKEDRYKNLSSLDEMHTKLEELQKQMAWALVTEMEKELEP
MKEKLRSDRQSTEKYDEKVDEWKNKVEEAEKKYKQIQEQLEGITQQVQELQPKCAELKAE
AQRRNTLLKTSEVTVHRCKANLRDLEKDKVQLSSRINDLKLSISQTTGAESQARTERMEQ
IQAELENMTHQISTLGQQIDQYQNASSRAKEEQGKMRREQEVLRKSIEVNRRNLQTMESS
RSNRLRRFGEHMPALLTAIQEAHKRGQFKHKPRGPLGYLISPKDPELALAIEVCLKGQLQ
AFTCDNHEDEKVLQGLMARVFPGGRRPTIITSQFLPRIHDTRKKAVNHPEYPSVLQALEI
EDPVVANCLIDQRGIESILLIKNRTEARRVMQGRNPPQNCVQAFSKEGDQIFNNRNYTAE
QTRANYLTGDVEEEIRHLHREIENQKAQANRFEQQMRKLDEDIKQNEGLLRRAHIEQKTT
KDKAMKLQLELTDLQNVEEPQSEDLKPLEEDLQEIVSKFSSKRTECDDARLQMADLKASY
DKAEREYKQHKEQINTVAEEADSIKEELSKADQEVMKCKHHKKHYDEKRSTHLRNIQTLK
ANLDSKDQELQTSVSKATEICPERVEVRRTARSLDSEINRLKVKISTQREQQGDREEVVR
QYHEALENYKNLAQQMKNLNTFIKSLDSVMNHRLQVYAELRRFLSARCKYYFDSMLAQRG
YTGSMTFDHKNETLSITVQPGQGNKAHLSDMRTLSGGERSFSTVCFVLSLWAITEAPFRC
LDEFDVYMDMVNRRISMDMMLKVAAGQRYRQFIFLTPQTINLPMSEIIRILRLKDPDRGQ
NNTQRGQDEDQ
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaagaaaaagcagctctgtcagtgagaaccccaacaaacgggtcagacctgag
caagcggaggaagaggaagataaagatgccgctgatggtgaccaggatgatcctctaatg
aaacagttgcaaagtgctggtgaggtggtgagtgatgcagggattgtggagagcatcacg
ttgaaaaacttcatgtgccactcactcctcggcccgttcacttttggttccaatgtcaac
ttcgtcgtcggcaacaatggaagtggaaagagtgccgtcctgacagctctcatagttgct
ttaggtgggaatgcgcaggccacaaacagaggatcatccctcaagggttttgtgaaagaa
ggtgaaagctcagctgatgtatcgattaccctgcgtaacaaaggacgggatgcttacaaa
cctgaggtgtacggtgcagccatcattgtagatctgagaataacacgtgaagggttgaga
acctataaactgaggagcaaatcaggtcaaattgtttcaaccaaaaaggaagagctcctg
tccatcctggataactttaatattcaggtcaataatcctgtgtcagttctgactcaagag
atgagcaaatacttcctacactctaaaggagagggggacaagtataagtttttcatgaaa
gctacacaactggaccagatgagagaggacttcgtctacatcaaaaccaccaagcatgtc
acagaggataaagtggggcaacatagtgaatgcttgaaagacttgaagcggaaatacctg
gagaaagaggaccgttacaagaacctatcatcacttgatgaaatgcataccaaactggag
gagttgcagaagcagatggcctgggctttagtgacagagatggagaaggagttggagccg
atgaaggagaagctgcggtcagacagacagtccactgagaagtatgatgagaaggtggac
gaatggaagaacaaggtggaggaggctgagaagaagtacaagcagatccaggaacagttg
gaggggatcacccagcaagtccaggagctccagcccaaatgtgctgaactcaaggctgag
gcccagagacgcaatactcttctcaagaccagtgaggtcactgtccaccgatgcaaagct
aaccttagagacctggaaaaggacaaggttcagttgtcctctaggataaatgatctcaaa
cttagcatcagtcagacaacaggagcagagagtcaggccaggacggagcgtatggagcag
atccaggccgagctggagaacatgacgcaccagatttccactctgggccagcagattgac
cagtatcagaacgcctctagccgtgccaaggaagaacaaggaaagatgaggagagagcag
gaagtgctcaggaagtccatcgaagtcaatagaaggaacttgcagactatggagagcagt
cgttccaatcggctgcggcgttttggagaacacatgccagcactcctcactgccatccag
gaagctcacaaaagaggccagttcaagcacaaaccccgaggacctctgggttaccttatt
agcccaaaggacccagagctggccctggctatagaagtttgtcttaaaggtcagctgcag
gccttcacctgtgacaaccacgaggacgagaaggtgctgcagggcctcatggccagagtg
ttccccggaggccgcagacctaccatcattaccagccagttcctcccaagaatccatgat
acaagaaaaaaggccgtgaatcaccctgaatacccctccgtgcttcaagctctagagatt
gaggacccagttgtggccaactgcttgattgatcaaaggggtatagagagcattctactc
attaagaatcgcacagaagctcggagagtgatgcagggcagaaaccctcctcagaactgt
gtccaggctttctctaaggagggagaccagatcttcaataaccgtaattacactgctgag
cagaccagagccaactacctcacgggagatgttgaggaggagattaggcatttgcatagg
gagatagagaaccagaaagctcaggcaaaccgcttcgagcaacagatgagaaaattagat
gaagacatcaaacagaatgaagggctgctgagaagagctcacatagagcagaagactacc
aaagataaggccatgaaactacagctggagctgacagacctgcagaatgtggaagagcct
cagtcagaggacctcaagcccctggaggaggatcttcaggagattgtttccaagttttcg
tccaagcgtactgagtgcgacgacgcacgacttcagatggccgaccttaaggcctcctat
gataaggcagagcgggagtacaagcagcacaaagagcagatcaacactgtcgctgaggaa
gctgactcgatcaaggaggagctgagtaaggctgaccaggaggtgatgaagtgcaagcat
cacaagaaacactatgacgagaagcgcagcacccatcttcgcaacatccagaccctcaaa
gccaaccttgacagcaaggatcaggaacttcagacgtctgtgtccaaggctacagagatc
tgtcctgagcgcgtagaagtgcgtcggacagccaggagtctcgatagtgaaatcaaccgt
ctcaaggttaagatctctacccagcgggaacaacagggggaccgcgaggaggttgtgagg
cagtaccatgaagctctggagaactacaaaaaccttgcacagcaaatgaagaacctcaac
accttcatcaaaagcctcgacagtgttatgaaccacagactccaggtttacgctgagctc
aggaggttcctctcggcccggtgtaaatactactttgacagcatgctggcccagagaggc
tacactggaagtatgacctttgaccacaagaatgaaaccctctccatcacagtgcagcca
ggccaaggaaacaaggctcacttgagcgacatgcgcactctgtctggaggcgagcgctcc
ttctccactgtttgctttgtgctctctctttgggccatcacagaggcgcctttccgctgc
ctcgacgagtttgatgtttacatggacatggtgaacaggaggatttcaatggacatgatg
ctgaaggtggctgctggtcaacgctacagacaattcattttcctcaccccacagaccatt
aatcttcccatgagcgaaatcatccgcatcctgcgactgaaagatcctgaccggggccaa
aacaacacgcaaagaggtcaagacgaggaccagtag
DBGET
integrated database retrieval system
