Seriola dumerili (greater amberjack): 111239765
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Entry
111239765 CDS
T05606
Symbol
dhx36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111239765 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111239765 (dhx36)
03012 Translation factors [BR:
sdu03012
]
111239765 (dhx36)
Enzymes [BR:
sdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111239765 (dhx36)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111239765 (dhx36)
Translation factors [BR:
sdu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111239765 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
NPHP3_N
NB-ARC
PhoH
HerA_C
Motif
Other DBs
NCBI-GeneID:
111239765
NCBI-ProteinID:
XP_022625392
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MSYGYGGGSGRRGRRGGRGQRDGSRERWDRGGGFRGHSSDFDQDRGGQRDRPPPHLKGRE
IGLWYARYGAVRRKQADRRSRAVVQMDEAREQHITKLLNSVQNDQSGPERDGRNVRASTS
DSWRTETNRSGHCYFDGDRPEEDKLKTEIKSEEEEEEVSLAVAKDEPPDTWEEEEPQEEE
KEKLRRKDRDLEFLFQEVVRDSSLDDYLKRDLQSKQSDPKYKEMLKFREKLPSYSKKEEL
VELINSNRVLVVSGETGCGKTTQVTQFILDDYINRGIGSMCRVVCTQPRRISAISVAERV
AAERAESVGNGNSCGYQIRLQSRLPRRQGSVLYCTTGIILQWLRSDPLLSSISHLVLDEI
HERNLQSDVLLVIVKDLLNLRDDLKVILMSATLNAEKFSKYFDKCPMIHIPGLTFPVEEF
LLEDIVEMTRYRPQNQDRRPSWKRGFWQGRHSRPEKEEKEAEYKDSWPCYARTLQHRYSD
NTIAALEMLDNDEKIDLELILALIRHIVLNEEEGAILVFLPGWDNISSLNDLLTAQQMFR
SERFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKET
NFDTNNNISTMTAEWVSLANAKQRKGRAGRVCPGKCYHLYNGLRASLLDAYQLPEIMRTP
LEELCLQIKILKLGSIAQFLEKALDPPTEKAVNLAIKNLIDLNALDHSENLTALGFHLAR
LPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKMADMRRKALSRNSKSD
HLTIVNAFQGWEEAKRRGARYEREYCWDNFLSANTLQMLHNMKGQFAEHLMHAGFVSSKD
PRDPNSNVNSDNEKLIKAVIVAGLYPKVAMIRPSHSKKRPGVKVYTQADGKVCIHPKSVN
AEETEFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDITIQKDEDQETIAVDKWIV
FRSPARIAHLVKSLKKELDSLLEDKIRNPAPVDWQNRQSKDCAVITAIIDLITTQEKPAG
STKGYGRTWASAPRGQHIHFNDDDDDDDD
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggatatggcggcggaagtggaagaagaggcagaagaggaggtcgagggcag
agagatggcagcagagaaaggtgggacagaggagggggtttcagaggacatagttccgac
tttgaccaggaccgaggtggacaacgggaccgtcctcctccacacctgaagggccgtgag
attggtctgtggtacgcaagatacggggccgtgaggaggaaacaggctgaccggagatcg
cgggcagtggtccagatggatgaggccagagagcagcacattaccaagctgcttaactct
gtccagaatgaccagtctggtccagagagagacggcaggaatgtaagagcctctacgtct
gacagctggcggacagaaaccaatagaagtggtcattgttactttgatggggataggcct
gaagaagataaactgaagactgagatcaaatctgaggaagaggaggaagaagttagttta
gcagtcgctaaagatgaacctccagacacgtgggaagaagaagagccacaggaggaggag
aaagagaagttgaggaggaaagacagagatctggagttcttatttcaggaagtggtcaga
gatagttcactggacgactacttaaagagagatctgcagagcaagcagtcagatccgaag
tacaaagaaatgctgaaattccgggaaaaactaccatcttatagcaaaaaagaggagttg
gtagagctgatcaactctaaccgtgtcctcgttgtgagtggggagacaggctgtggaaag
accactcaggtcacccaattcatcctagatgactatatcaatagaggcattggctcgatg
tgccgggtggtctgcacgcagcctcgtcgcatcagtgctatctcggtagcggaacgtgta
gcagcagagagggcagaaagtgtagggaatggaaattcttgtggttaccaaatccgccta
cagagccggttaccacggagacaaggttccgtcctgtactgtacaacgggcattattctt
cagtggcttcgctcagaccctttgttgtccagcatcagtcacctggtattggacgagata
cacgagaggaacctgcaatcagatgttttgctggttattgtgaaggacctactcaacctc
cgggacgatctcaaggtcatcctcatgagtgccacactcaatgctgagaagttttctaaa
tattttgacaagtgtccaatgatccatatccctggtttgacgttcccagtggaagagttc
ctattggaggacattgtagagatgaccaggtatcgcccccagaatcaggaccgtcgcccc
tcatggaagagaggcttttggcagggccgccactccagacctgagaaggaggagaaagag
gctgaatacaaggacagctggccttgttatgcacgtacactgcagcacagatattctgac
aacactattgcggcactggagatgttggacaatgatgagaagattgacctggagctgatc
ctggcactgatccgtcatattgtgctcaatgaggaggaaggagcaatcctggtgttcctc
cctggctgggacaacatcagcagtctcaatgacctgctcacagctcagcagatgttccga
tcagagcggttcgttatcatccctttgcactccctcatgcctaccgttaatcagacgcag
gtgttcaaaaggcctcctcctggagttagaaagattgtgattgctaccaatatagctgag
accagcatcaccatagatgatgttgtatatgtgatagatggtgggaaaattaaggagacc
aactttgacaccaacaacaacatcagcactatgacagccgagtgggtcagcctggccaac
gccaaacagaggaaaggacgtgccggcagggtgtgtccagggaaatgctatcatctgtac
aatggtttgagggccagcctgctggatgcctatcaattacccgaaattatgaggacacca
ctggaggagctctgcctgcagatcaagatactgaagcttgggtctatagctcaattcctg
gagaaagccctggaccctcccactgaaaaggccgtcaatctagccatcaagaacctcata
gacctgaatgccctggaccattcagagaatctgacagcgctgggtttccacctggctcgt
ctgcctgtggagcctcacattggcaaactcatcctgtttggagctctgttgggctgcctc
gaccccgtactcaccattgctgcttcactcagcttcaaagaccctttcttcatacccctg
ggtaaagagaagatggcagacatgaggagaaaggccttgtccaggaactccaagagtgac
cacctcactattgtcaatgccttccaggggtgggaggaagcgaaaaggcgtggtgccagg
tacgagagggagtactgctgggacaacttcctgtctgccaatactctccagatgctgcac
aacatgaagggtcagtttgctgagcatctaatgcatgcaggctttgtcagcagcaaggac
cccagagaccccaactctaatgtcaattcagacaatgagaagttaatcaaagcagtgatt
gtagccggtctgtaccctaaggtggccatgatcagaccatctcacagcaaaaagaggccg
ggggttaaggtgtacacccaggctgatggaaaggtgtgtatccacccgaaatctgtcaat
gccgaagagacggagttcaactacacctggctcatctatcacctcaagatgagaacgagc
agtatcttcctgtacgactgcactgaagtgtccccgttctcgctgctgtttttcggagga
gacatcaccatccagaaagacgaggaccaggagaccatcgcagtggacaaatggattgtc
ttcagatccccggcacgcatcgctcaccttgtcaagagtttaaagaaagagctggattct
ctactggaggataaaatccgtaacccggctcctgtggactggcaaaaccgtcagtccaaa
gactgtgctgtcatcacagccatcatagatctcatcaccacccaggagaagcctgcaggc
agcactaaaggctatggcagaacgtgggcgtcagccccaaggggacaacacattcacttc
aatgacgatgatgatgacgacgacgattag
DBGET
integrated database retrieval system
