Seriola dumerili (greater amberjack): 111239784
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Entry
111239784 CDS
T05606
Name
(RefSeq) laminin subunit beta-4-like
KO
K06245
laminin, beta 4
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04510
Focal adhesion
sdu04512
ECM-receptor interaction
sdu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111239784
04518 Integrin signaling
111239784
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111239784
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMB1
LAMININ_IV_B
LAMB4
Imm70
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
111239784
NCBI-ProteinID:
XP_022625411
LinkDB
All DBs
Position
Unknown
AA seq
1856 aa
AA seq
DB search
MSKAFSISGRISSTPSTLPPSSFASFFSQTASLTGVLLPAALLQDPQDLQDLQDLQDRQD
SQDRQDLQDRQDQCPGGSCSPQLGDLMVGRAAQLSASSTCGLDGPQNYCIIGYLEEGQKC
FTCDSRLPYDRYSNPNSHRIENIITTFDPERKMKWWQSENGVHQVSIRLDLETVFQFSHL
VLTFKSFRPAAMLVERSKDFGRTWKVFRYFAEDCSLHFPSVSSELADSVDDVICDSRYSG
SEPSTDGEVVLKALDPIFEIQNPYTPNIQDLITVTNIRVNFSRLFTLGDTLLSRRRRNPQ
DKYYYALYNMVVRGSCFCNGHASRCTPVDGGRGDVFTQTGMVHGRCVCQHNTAGENCEKC
QDFHHDSPWRPGGEDTADICRRCNCHGHSDSCHFDAIRFEVTGGMSGGVCDDCRHDRTGP
QCEQCRPFLFQDPQRATDDPHACIPCDCDPAGSHGGGLCDALSGQCVCKENVEGQRCDRC
KHGFFNLRQDDPAGCQVCRCHVLGSVGYCDQLTGSCECDRLASGPLCDRCLAGFWGLGNS
AFRCSPCDCDIGGAHGTTCSPEDGQCNCLPNMIGRRCSDPAPGYFLPQLDYFLYEAELAT
PLHGGSSPPPTNSPSSSSLVILPQCEKYYREQGFDFKFSSGRVVLVRRTRRLARQRRQGQ
QSSIPLYPGHALQIITRQRTPDQPITWTGLGLVRVLEGAGLRFTVNNLPSSMDYQLLIRY
KMESPFDWLASVSIIMLSPGEGGCSNNPTGRETLILPGNSGAGILDSAVCLNAGGRYFVD
VVFNKQPGSDGSDGSDGSDGSYILIDSMGLIPRIESVQNFCSQSDLESFRRFRCIGLAAE
LDSQASVPERCEGLIKSLSAQIHNGAVVCRCNVIGSLGPSCSKLGGFCECKPNVIGRCCD
TCAPLTFGLGSDGCKPCECDTRGSVSELCDQVRGQCACRSEVTGRRCDRCQTGFWGFPFC
RPCECNGLSEVCDEETGECVNCKEHSTGLHCDRCVEGYYGDPVSRQPCQPCLCPDVQGSG
RFFATSCQHNPQSLSLTCNCREGHTGPRCDRCNPGFYGDLTVLGASCEECPCNNNINPDD
RDSCDSLTGDCLCCLHNTMGPRCQNCKPGYYGNALVQDCKECSCNRRGTEVTRCPLGSPC
FCDSTTGQCPCRRGVEGILCDECEDGYWNLDGPSGCQPCSCDPVNSLSNICNKVTGQCPC
RPEFGGRQCDECGENHFGNPDLQCISCDCNLEGTERPSCDPETGECICRSGVTGIFCDEC
AAGYSSVFPACEECHPCTALWAENVTDVQRAAQRMKTFIPHHSDDLRPGDSHRWQQMLEM
HSKLDNLTNLTGLSLPKVEKVEKLWGKIGKLKDALDPIMILINPSPLLNTEIDNIHLDFK
KLLNSLKEKVIKDPDDEDDEGNLEELQDEIQKLHTEFMLDEKRVKNANKGLEDSMDTRQE
VKHKLSTCSKGGGRDLAPLEMKIKELSVVQFNRKVCGGPGLEDCSGCGGALCGLDLGDRK
CGGPNCDGVVPVSQKASETAERAKDQLITLQSRLEESKNKINYAKQTAQDTKDQAKDLQD
RKNANMDSFEREKTKTRELIQQVKDYLIDEMVPPEDIEKMARAVLDIQLPRSPVQIRSMI
NDIKNLLSNATHFQDDLKSLEERTMATQDLLQEAQKLKERTKDIDVTEIRRDIYEAERAQ
DKANNDLETASRDGDMSKEQIQDIKDKLENIETKLMNRQPEDLKNEMEALKKKNEQSREM
AGEAQEAAESAFTTTDTQTELDDVMKLFEVLKQKNSSRAVQGEAGELLKNITEEAEDMKR
QVADKLRQIQGLEQKIQQLIRSKEQKSAEVSMLLQTVDSLRKEISKRAEGYVSCTS
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagccttcagcatctcagggcgcatctcgtccacacccagcaccttgccgccc
agcagcttcgcctccttcttcagccagacggcttccttgactggtgttcttcttccagca
gctctgctccaagacccccaggaccttcaggaccttcaggacctccaggaccgccaggac
agccaggaccgccaggacctccaggaccgccaggaccagtgtccaggcggctcctgcagc
cctcagctgggtgacctgatggtgggtcgagctgctcagctctcggcctcatcgacatgc
ggtctggacggacctcagaactactgcatcataggatacttggaggaggggcagaaatgt
tttacatgtgactctcgtctgccgtacgatcgctacagcaacccgaacagccaccgcatt
gagaacatcatcacgacctttgaccccgagagaaaaatgaagtggtggcagtctgagaac
ggtgttcaccaggtcagcatcaggttagacctggagacagtgttccagttcagtcacctg
gtcctcaccttcaagagtttccgtccagcagccatgttggtggagcgatcaaaggacttt
ggacgaacctggaaggtttttcgttacttcgcagaagactgttcacttcatttcccttca
gtgtccagtgagctggccgacagcgtcgatgatgtcatctgtgacagcagatactctgga
tcagagccatccactgatggagaggtggtgctcaaagctctggatcccatctttgaaata
caaaacccatacacaccaaacatccaagatctcatcactgtgaccaacattcgggtgaac
ttctctcgtctcttcacactcggtgacactctgctgagtcggagacgcagaaaccctcag
gacaaatattactacgcactctacaacatggtggtgagaggaagctgcttctgtaatgga
catgccagccgctgtacacctgtggatggaggacggggggacgtcttcacccagactggc
atggttcatggtcgttgtgtttgtcagcacaacacggctggagagaactgtgagaaatgt
caggactttcaccatgactccccctggaggcctggaggagaagacacagctgacatctgc
aggagatgtaactgtcatggacactcggactcgtgtcacttcgacgccattcgtttcgaa
gtgacgggtggcatgagcggcggtgtgtgtgatgattgccgccatgacaggacagggcct
cagtgtgaacagtgtcgacctttcctgttccaggatccacagcgagcaacggacgacccg
cacgcctgcataccttgtgactgtgacccggccggttctcatggcggaggtctttgtgac
gctctgagcggtcaatgtgtctgtaaagaaaatgtggagggtcaacgctgtgatcgttgc
aaacatggcttctttaatctgagacaggatgacccggccggttgccaagtgtgcaggtgt
catgttttgggaagtgttgggtactgtgatcagctgacaggaagttgtgaatgtgaccgt
ttggcgagcgggccattgtgtgatcgatgtctggcaggtttctggggtttgggaaactct
gcattcagatgttcaccctgtgactgtgacattggaggagctcacggcaccacgtgttct
ccagaggacggacaatgtaattgtttaccaaacatgattggtcggcgctgctctgaccct
gcacccgggtacttcctgcctcaactggactacttcctgtatgaggcggagcttgccacc
ccactgcacggaggaagctcgcctcctcctactaattctccgtcatcttcttctctggtg
attttaccacagtgtgagaagtactacagagagcagggctttgacttcaaattcagtagt
ggacgagttgtcctggttcggaggactcgtcgacttgcccgccaaaggagacagggacag
cagagcagcatccctctgtaccccggtcacgccctgcagatcattacccggcagagaaca
cctgatcagccaatcacctggactggcctgggattagtgagagtgttggagggggcgggg
cttcgatttactgtgaacaatctgccgtcatcaatggattaccagctgctaattcgctat
aagatggagtctccatttgattggctggcttcagtcagcatcatcatgctgtccccaggt
gagggtggctgcagcaacaacccaacaggacgtgaaactctgattcttcctggaaactct
ggagcaggtattctggattctgcagtgtgtctgaacgcaggcggtcggtactttgtggat
gtcgtctttaacaaacagcctggatctgatggatctgatggatctgatggatctgatgga
tcatacatcctgatcgactcgatgggtctgattccccgaatcgagtctgtccagaacttc
tgctctcagagtgaccttgaatctttccgccgctttcgctgcattggattggccgctgag
cttgactcgcaggcgtcagtgccggagcgctgcgagggactcatcaaaagcctgtcggca
caaatccacaatggagctgttgtttgcaggtgtaatgtcattggttctctcggaccatcc
tgcagtaaactgggtgggttctgtgaatgtaaacccaacgtgattggccgttgctgtgat
acctgtgcaccactgacgtttggtttaggatctgatggctgcaaaccgtgtgagtgtgac
actcgtggttcagtgtcagagctgtgtgatcaggtcagaggtcagtgtgcatgtcgctca
gaggtgacggggcgacgctgtgatcgctgtcagacgggattctggggtttcccattctgt
cgaccctgtgaatgtaacggactgtcagaggtgtgtgacgaagagaccggagagtgtgtg
aactgcaaagagcacagcacgggactgcactgtgacaggtgtgtggagggttactatggt
gaccctgtctccagacagccctgtcagccctgcttgtgtccagatgttcagggcagtgga
cgattcttcgccacttcttgtcaacacaacccacagtccctcagtctgacctgcaactgc
agagaggggcacacaggtccacgttgcgatagatgcaaccctggtttctatggtgacctg
acggtactgggtgctagctgtgaggagtgtccctgcaacaacaacatcaacccagacgac
cgcgactcctgcgacagcctgacaggcgactgtctgtgctgcctccacaacacgatggga
ccacgctgccaaaactgcaaacctggttactacggcaacgccttggtgcaggactgcaaa
gaatgctcctgcaaccggcgggggacggaggtgactcggtgtcctctggggagtccctgt
ttctgtgattcaactacaggacagtgtccctgcaggaggggcgtagaggggatcctctgt
gacgaatgtgaagacggatactggaacctagacggaccgtcagggtgtcagccctgcagc
tgtgaccccgtcaactccctgtccaacatatgcaacaaggtgacgggacagtgtccgtgt
cgtcctgagtttggagggagacaatgtgatgaatgtggagaaaaccactttggaaatcca
gatctgcagtgtatctcttgtgactgtaacctggagggaaccgagcgtccatcatgtgac
cctgaaaccggtgagtgtatctgtagatctggtgtcactgggatcttctgtgatgagtgt
gctgccggctacagctcagtgttcccggcctgcgaggagtgccacccctgcactgccctc
tgggccgaaaatgtcaccgatgtccagcgagccgcccagaggatgaaaaccttcatccct
caccacagtgatgacctgcggcctggagacagtcaccgctggcaacagatgctggagatg
cactccaagctggacaacctcaccaacctgacaggactctccctgccaaaggtggagaag
gtggagaaattgtgggggaagattgggaagttgaaagacgcccttgacccgatcatgatc
ctgatcaacccatctcctctcctcaacactgaaattgacaacattcatctggatttcaag
aagctgctgaacagcttgaaggagaaagtcatcaaggatccagatgatgaagatgatgaa
ggcaacctggaagagctgcaggacgagattcagaagcttcatacagagttcatgttggat
gagaagagggtaaaaaatgccaataaaggtttggaggactccatggacaccagacaggaa
gtcaaacacaaactgagcacgtgcagcaaaggaggaggaagagacctggcaccgctggag
atgaagatcaaagagctcagtgtggtacagttcaaccgaaaggtctgtggaggaccaggt
ctggaggactgttcaggatgtggtggagctctgtgtggtctggatctgggagacaggaag
tgtggaggtccaaactgtgatggagtcgttcctgtgagtcagaaagcttcagaaacagct
gagagagccaaggaccaactcatcacactccaatccagactagaggagtccaagaacaag
atcaattatgccaaacagacagctcaggacaccaaagaccaggccaaagacctgcaggac
cggaaaaacgccaacatggactccttcgagagagagaagaccaaaacaagggagctcatc
cagcaagtcaaagactacctgatagatgagatggttcctccagaagacattgagaaaatg
gcccgagctgtgctggacatccagctgccacgatctcctgtgcagatccgatcaatgatc
aatgacatcaagaatctgttgtcaaatgctacacacttccaggatgaccttaagagcctg
gaagagcgcaccatggccacccaggacctgctgcaggaagctcagaaactcaaggagcgg
acaaaggacatcgatgtgacagagatcagaagagacatttatgaagcagagagagctcag
gacaaagccaacaatgacctggaaacagccagccgagacggagacatgagcaaagagcaa
atccaagacattaaagacaaactggaaaatattgaaacaaagctgatgaatcgtcaacct
gaagatctgaagaacgagatggaagctctgaaaaagaaaaatgaacagagcagagagatg
gcaggagaggcacaagaggctgcagagtccgcttttaccaccacagacacacagacagag
ctggatgatgtgatgaagctgtttgaggttttaaagcagaaaaactccagtcgggcggtt
cagggtgaagctggagaactactgaaaaacatcacggaggaggcggaggatatgaagaga
caggtggcagacaaactcagacagatacaaggtctggagcagaagatccagcagctaatc
aggagtaaagagcagaaatcagctgaagtctccatgttgttgcaaacagtcgattcactt
cgaaaggaaatctccaaacgagccgaaggatacgtcagctgtacttcatga
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integrated database retrieval system