KEGG   Seriola dumerili (greater amberjack): 111239784
Entry
111239784         CDS       T05606                                 
Name
(RefSeq) laminin subunit beta-4-like
  KO
K06245  laminin, beta 4
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu04510  Focal adhesion
sdu04512  ECM-receptor interaction
sdu04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    111239784
   04518 Integrin signaling
    111239784
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    111239784
SSDB
Motif
Pfam: EGF_laminin Laminin_N EGF_LMN_ATRN LAMB1 LAMININ_IV_B LAMB4 Imm70 F5_F8_type_C
Other DBs
NCBI-GeneID: 111239784
NCBI-ProteinID: XP_022625411
LinkDB
Position
Unknown
AA seq 1856 aa
MSKAFSISGRISSTPSTLPPSSFASFFSQTASLTGVLLPAALLQDPQDLQDLQDLQDRQD
SQDRQDLQDRQDQCPGGSCSPQLGDLMVGRAAQLSASSTCGLDGPQNYCIIGYLEEGQKC
FTCDSRLPYDRYSNPNSHRIENIITTFDPERKMKWWQSENGVHQVSIRLDLETVFQFSHL
VLTFKSFRPAAMLVERSKDFGRTWKVFRYFAEDCSLHFPSVSSELADSVDDVICDSRYSG
SEPSTDGEVVLKALDPIFEIQNPYTPNIQDLITVTNIRVNFSRLFTLGDTLLSRRRRNPQ
DKYYYALYNMVVRGSCFCNGHASRCTPVDGGRGDVFTQTGMVHGRCVCQHNTAGENCEKC
QDFHHDSPWRPGGEDTADICRRCNCHGHSDSCHFDAIRFEVTGGMSGGVCDDCRHDRTGP
QCEQCRPFLFQDPQRATDDPHACIPCDCDPAGSHGGGLCDALSGQCVCKENVEGQRCDRC
KHGFFNLRQDDPAGCQVCRCHVLGSVGYCDQLTGSCECDRLASGPLCDRCLAGFWGLGNS
AFRCSPCDCDIGGAHGTTCSPEDGQCNCLPNMIGRRCSDPAPGYFLPQLDYFLYEAELAT
PLHGGSSPPPTNSPSSSSLVILPQCEKYYREQGFDFKFSSGRVVLVRRTRRLARQRRQGQ
QSSIPLYPGHALQIITRQRTPDQPITWTGLGLVRVLEGAGLRFTVNNLPSSMDYQLLIRY
KMESPFDWLASVSIIMLSPGEGGCSNNPTGRETLILPGNSGAGILDSAVCLNAGGRYFVD
VVFNKQPGSDGSDGSDGSDGSYILIDSMGLIPRIESVQNFCSQSDLESFRRFRCIGLAAE
LDSQASVPERCEGLIKSLSAQIHNGAVVCRCNVIGSLGPSCSKLGGFCECKPNVIGRCCD
TCAPLTFGLGSDGCKPCECDTRGSVSELCDQVRGQCACRSEVTGRRCDRCQTGFWGFPFC
RPCECNGLSEVCDEETGECVNCKEHSTGLHCDRCVEGYYGDPVSRQPCQPCLCPDVQGSG
RFFATSCQHNPQSLSLTCNCREGHTGPRCDRCNPGFYGDLTVLGASCEECPCNNNINPDD
RDSCDSLTGDCLCCLHNTMGPRCQNCKPGYYGNALVQDCKECSCNRRGTEVTRCPLGSPC
FCDSTTGQCPCRRGVEGILCDECEDGYWNLDGPSGCQPCSCDPVNSLSNICNKVTGQCPC
RPEFGGRQCDECGENHFGNPDLQCISCDCNLEGTERPSCDPETGECICRSGVTGIFCDEC
AAGYSSVFPACEECHPCTALWAENVTDVQRAAQRMKTFIPHHSDDLRPGDSHRWQQMLEM
HSKLDNLTNLTGLSLPKVEKVEKLWGKIGKLKDALDPIMILINPSPLLNTEIDNIHLDFK
KLLNSLKEKVIKDPDDEDDEGNLEELQDEIQKLHTEFMLDEKRVKNANKGLEDSMDTRQE
VKHKLSTCSKGGGRDLAPLEMKIKELSVVQFNRKVCGGPGLEDCSGCGGALCGLDLGDRK
CGGPNCDGVVPVSQKASETAERAKDQLITLQSRLEESKNKINYAKQTAQDTKDQAKDLQD
RKNANMDSFEREKTKTRELIQQVKDYLIDEMVPPEDIEKMARAVLDIQLPRSPVQIRSMI
NDIKNLLSNATHFQDDLKSLEERTMATQDLLQEAQKLKERTKDIDVTEIRRDIYEAERAQ
DKANNDLETASRDGDMSKEQIQDIKDKLENIETKLMNRQPEDLKNEMEALKKKNEQSREM
AGEAQEAAESAFTTTDTQTELDDVMKLFEVLKQKNSSRAVQGEAGELLKNITEEAEDMKR
QVADKLRQIQGLEQKIQQLIRSKEQKSAEVSMLLQTVDSLRKEISKRAEGYVSCTS
NT seq 5571 nt   +upstreamnt  +downstreamnt
atgtccaaagccttcagcatctcagggcgcatctcgtccacacccagcaccttgccgccc
agcagcttcgcctccttcttcagccagacggcttccttgactggtgttcttcttccagca
gctctgctccaagacccccaggaccttcaggaccttcaggacctccaggaccgccaggac
agccaggaccgccaggacctccaggaccgccaggaccagtgtccaggcggctcctgcagc
cctcagctgggtgacctgatggtgggtcgagctgctcagctctcggcctcatcgacatgc
ggtctggacggacctcagaactactgcatcataggatacttggaggaggggcagaaatgt
tttacatgtgactctcgtctgccgtacgatcgctacagcaacccgaacagccaccgcatt
gagaacatcatcacgacctttgaccccgagagaaaaatgaagtggtggcagtctgagaac
ggtgttcaccaggtcagcatcaggttagacctggagacagtgttccagttcagtcacctg
gtcctcaccttcaagagtttccgtccagcagccatgttggtggagcgatcaaaggacttt
ggacgaacctggaaggtttttcgttacttcgcagaagactgttcacttcatttcccttca
gtgtccagtgagctggccgacagcgtcgatgatgtcatctgtgacagcagatactctgga
tcagagccatccactgatggagaggtggtgctcaaagctctggatcccatctttgaaata
caaaacccatacacaccaaacatccaagatctcatcactgtgaccaacattcgggtgaac
ttctctcgtctcttcacactcggtgacactctgctgagtcggagacgcagaaaccctcag
gacaaatattactacgcactctacaacatggtggtgagaggaagctgcttctgtaatgga
catgccagccgctgtacacctgtggatggaggacggggggacgtcttcacccagactggc
atggttcatggtcgttgtgtttgtcagcacaacacggctggagagaactgtgagaaatgt
caggactttcaccatgactccccctggaggcctggaggagaagacacagctgacatctgc
aggagatgtaactgtcatggacactcggactcgtgtcacttcgacgccattcgtttcgaa
gtgacgggtggcatgagcggcggtgtgtgtgatgattgccgccatgacaggacagggcct
cagtgtgaacagtgtcgacctttcctgttccaggatccacagcgagcaacggacgacccg
cacgcctgcataccttgtgactgtgacccggccggttctcatggcggaggtctttgtgac
gctctgagcggtcaatgtgtctgtaaagaaaatgtggagggtcaacgctgtgatcgttgc
aaacatggcttctttaatctgagacaggatgacccggccggttgccaagtgtgcaggtgt
catgttttgggaagtgttgggtactgtgatcagctgacaggaagttgtgaatgtgaccgt
ttggcgagcgggccattgtgtgatcgatgtctggcaggtttctggggtttgggaaactct
gcattcagatgttcaccctgtgactgtgacattggaggagctcacggcaccacgtgttct
ccagaggacggacaatgtaattgtttaccaaacatgattggtcggcgctgctctgaccct
gcacccgggtacttcctgcctcaactggactacttcctgtatgaggcggagcttgccacc
ccactgcacggaggaagctcgcctcctcctactaattctccgtcatcttcttctctggtg
attttaccacagtgtgagaagtactacagagagcagggctttgacttcaaattcagtagt
ggacgagttgtcctggttcggaggactcgtcgacttgcccgccaaaggagacagggacag
cagagcagcatccctctgtaccccggtcacgccctgcagatcattacccggcagagaaca
cctgatcagccaatcacctggactggcctgggattagtgagagtgttggagggggcgggg
cttcgatttactgtgaacaatctgccgtcatcaatggattaccagctgctaattcgctat
aagatggagtctccatttgattggctggcttcagtcagcatcatcatgctgtccccaggt
gagggtggctgcagcaacaacccaacaggacgtgaaactctgattcttcctggaaactct
ggagcaggtattctggattctgcagtgtgtctgaacgcaggcggtcggtactttgtggat
gtcgtctttaacaaacagcctggatctgatggatctgatggatctgatggatctgatgga
tcatacatcctgatcgactcgatgggtctgattccccgaatcgagtctgtccagaacttc
tgctctcagagtgaccttgaatctttccgccgctttcgctgcattggattggccgctgag
cttgactcgcaggcgtcagtgccggagcgctgcgagggactcatcaaaagcctgtcggca
caaatccacaatggagctgttgtttgcaggtgtaatgtcattggttctctcggaccatcc
tgcagtaaactgggtgggttctgtgaatgtaaacccaacgtgattggccgttgctgtgat
acctgtgcaccactgacgtttggtttaggatctgatggctgcaaaccgtgtgagtgtgac
actcgtggttcagtgtcagagctgtgtgatcaggtcagaggtcagtgtgcatgtcgctca
gaggtgacggggcgacgctgtgatcgctgtcagacgggattctggggtttcccattctgt
cgaccctgtgaatgtaacggactgtcagaggtgtgtgacgaagagaccggagagtgtgtg
aactgcaaagagcacagcacgggactgcactgtgacaggtgtgtggagggttactatggt
gaccctgtctccagacagccctgtcagccctgcttgtgtccagatgttcagggcagtgga
cgattcttcgccacttcttgtcaacacaacccacagtccctcagtctgacctgcaactgc
agagaggggcacacaggtccacgttgcgatagatgcaaccctggtttctatggtgacctg
acggtactgggtgctagctgtgaggagtgtccctgcaacaacaacatcaacccagacgac
cgcgactcctgcgacagcctgacaggcgactgtctgtgctgcctccacaacacgatggga
ccacgctgccaaaactgcaaacctggttactacggcaacgccttggtgcaggactgcaaa
gaatgctcctgcaaccggcgggggacggaggtgactcggtgtcctctggggagtccctgt
ttctgtgattcaactacaggacagtgtccctgcaggaggggcgtagaggggatcctctgt
gacgaatgtgaagacggatactggaacctagacggaccgtcagggtgtcagccctgcagc
tgtgaccccgtcaactccctgtccaacatatgcaacaaggtgacgggacagtgtccgtgt
cgtcctgagtttggagggagacaatgtgatgaatgtggagaaaaccactttggaaatcca
gatctgcagtgtatctcttgtgactgtaacctggagggaaccgagcgtccatcatgtgac
cctgaaaccggtgagtgtatctgtagatctggtgtcactgggatcttctgtgatgagtgt
gctgccggctacagctcagtgttcccggcctgcgaggagtgccacccctgcactgccctc
tgggccgaaaatgtcaccgatgtccagcgagccgcccagaggatgaaaaccttcatccct
caccacagtgatgacctgcggcctggagacagtcaccgctggcaacagatgctggagatg
cactccaagctggacaacctcaccaacctgacaggactctccctgccaaaggtggagaag
gtggagaaattgtgggggaagattgggaagttgaaagacgcccttgacccgatcatgatc
ctgatcaacccatctcctctcctcaacactgaaattgacaacattcatctggatttcaag
aagctgctgaacagcttgaaggagaaagtcatcaaggatccagatgatgaagatgatgaa
ggcaacctggaagagctgcaggacgagattcagaagcttcatacagagttcatgttggat
gagaagagggtaaaaaatgccaataaaggtttggaggactccatggacaccagacaggaa
gtcaaacacaaactgagcacgtgcagcaaaggaggaggaagagacctggcaccgctggag
atgaagatcaaagagctcagtgtggtacagttcaaccgaaaggtctgtggaggaccaggt
ctggaggactgttcaggatgtggtggagctctgtgtggtctggatctgggagacaggaag
tgtggaggtccaaactgtgatggagtcgttcctgtgagtcagaaagcttcagaaacagct
gagagagccaaggaccaactcatcacactccaatccagactagaggagtccaagaacaag
atcaattatgccaaacagacagctcaggacaccaaagaccaggccaaagacctgcaggac
cggaaaaacgccaacatggactccttcgagagagagaagaccaaaacaagggagctcatc
cagcaagtcaaagactacctgatagatgagatggttcctccagaagacattgagaaaatg
gcccgagctgtgctggacatccagctgccacgatctcctgtgcagatccgatcaatgatc
aatgacatcaagaatctgttgtcaaatgctacacacttccaggatgaccttaagagcctg
gaagagcgcaccatggccacccaggacctgctgcaggaagctcagaaactcaaggagcgg
acaaaggacatcgatgtgacagagatcagaagagacatttatgaagcagagagagctcag
gacaaagccaacaatgacctggaaacagccagccgagacggagacatgagcaaagagcaa
atccaagacattaaagacaaactggaaaatattgaaacaaagctgatgaatcgtcaacct
gaagatctgaagaacgagatggaagctctgaaaaagaaaaatgaacagagcagagagatg
gcaggagaggcacaagaggctgcagagtccgcttttaccaccacagacacacagacagag
ctggatgatgtgatgaagctgtttgaggttttaaagcagaaaaactccagtcgggcggtt
cagggtgaagctggagaactactgaaaaacatcacggaggaggcggaggatatgaagaga
caggtggcagacaaactcagacagatacaaggtctggagcagaagatccagcagctaatc
aggagtaaagagcagaaatcagctgaagtctccatgttgttgcaaacagtcgattcactt
cgaaaggaaatctccaaacgagccgaaggatacgtcagctgtacttcatga

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