Seriola dumerili (greater amberjack): 111239787
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Entry
111239787 CDS
T05606
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04510
Focal adhesion
sdu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111239787
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111239787
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
111239787
NCBI-ProteinID:
XP_022625413
UniProt:
A0A3B4VPT8
LinkDB
All DBs
Position
Unknown
AA seq
1797 aa
AA seq
DB search
MLELQLAVLLALQVCTCAQEGGASVGQDVGYVSLPELSDVCTEGSCYPATGDLLIGRAHQ
LSSTSTCGLSRPEPFCIVSHLQEEKKCFMCESAAPYDELTNQTSSHRIENVVTTFAPNRL
KTWWQSENGLENVTVQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWQVYRYFAY
DCETSFPYISQGPMQKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRINDPYSPRIQNML
KITNLRVKFTKLHTLGDNLLDSRMEIKEKYYYAVYDMVVRGNCFCYGHASECAPVQGAGQ
TREGMVHGHCMCNHNTKGLNCEQCQDFYHDLPWRPAEGRNTNACKKCNCNQHSESCHFDM
AVYIASGNVSGGVCDDCQHNTAGHNCEQCQPFYYQHPERDVRDPNICQPCSCDPLGSLHG
GMCDRTTDVGAGLIAGQCRCKVNVEGERCERCRPAHYGLSDGPDGCTACTCSPVGTVPGG
NPCDSETGSCFCKRLVTGRDCDHCVSEHWGLSNDMDGCRPCDCDLGGAVNNQCDQVSGQC
VCRDHMFGRRCDQVESGFYFVALDHYTYEAEDAKFGPGVTLVPRPHPQDRSPTWTGIGLV
NIPEGAFLEFSVDNIPHSMEYDILIRYEPQLPDQWEEVLMTVMRPGPIRADSRCVNTVPD
DDNQMTSLHPGSRYVVLPRPVCFESGLNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHC
KNLEIFTASEGGDSSRNSGWETFQRYRCLENSQSVIKTPMTDICRNFIFSISAMLHQGAK
ECQCDLQGSLSTVCDPSGGQCQCRPNVVGRNCDRCSPATFQFGPNGCRACACDPQGSQSP
FCDQLTGQCVCVSGAYGRQCDRCLPGHWGFPTCRPCSCNGHSDDCDPTTGYCINCRDQST
GHTCDRCLDGYYGDPVLGSGDHCRPCMCPDGPGSQRQFAGSCYRSDDSQQAICVCNTGYR
GARCDECSPGYYGNAGEPGGQCKPCQCNNNIDMLDPESCDAQTGECLRCLYHSEGTACQD
CKLGYYGNALLQDCRKCVCNHLGSDPSSCPSSDCHCDRSSGQCHCLPNVVGQHCDHCAPD
TWNMASGSGCQTCNCDPKHSYGTSCNEISGQCSCHPGFGGRTCSECRELFWGDPEIKCHA
CDCDPRGVSQDQCNKESGHCVCVEGVSGPRCDVCARGFSGTFPSCRRCHQCFAEWDDIIG
QLTNQTHRLVNKVNAIKASGVSGPYKKTIDSLERSAADIRVLLNQNPASQPLTEIQHLLQ
QASDLMGALRQMLNHTEQTLLQVEDQDSAAETKLDSVTSDAQKLERTVQELLDQVEFIKN
SDIRGATDSVTKYFLQSQEAEARTNTSTIDAGSLVETSGTLRQLTEDKLNQTREEFLRRH
TEHAQRLDDLAGELQTLDLSEISHKTCGRPSAGQDLCSSSCGGLGCVDSEGRAACGGEGC
DGVVTTADGVWRKARESEQEILSAMGEVEKLSKMVSEAKLKADEAKLSAQDILTKTNTTK
HRVDQSNEELRSLIRQIRDFLTQDAADLESIELVANEVLAMQMPTTPAQLQNLTEEIRQK
VGELGHVENILLQSAEDIQRAENLLDQARRASEEAADVKDSAQTVKRALEEAQRAQTAAS
SAIQQAATDIRSTNSLLSSVQSETADAELKLNNATQRLQRLEQDVTLLKDKAVNVTLSTE
RANQNAASIRQIAEEVKKDLDSDLKDKYATVGQLIGQKAGGVADAKKRAESLQQKAKELL
LQASDKLQLLKDLEKSYKDNQRTLEVKAELLVELEAAVKELLQEISHKVTVYSTCLF
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgttggagcttcagctcgcggtgctgctcgctttgcaggtgtgtacctgtgctcaagag
ggcggggcctcggtgggccaggacgtgggttatgtcagcctgcctgagctcagtgatgtc
tgcaccgaaggcagctgttaccccgcaacaggagaccttctgattggccgagctcaccag
ctgtcgtccacctccacctgtggtctgagccgacccgaaccgttctgcattgtcagccac
ctgcaggaggagaagaagtgtttcatgtgcgaatcagcggcgccctacgacgagctgacc
aatcagacgagcagccatcgcatcgagaacgtcgtcaccacgttcgctccgaacagactg
aagacatggtggcagtctgagaacggtctggagaacgtcaccgtgcagctgaacctggag
gcagagtttcacttcacacacctcatcatgacctttaagacgtttcgtcctgctgccatg
gtgatcgagcgatcagctgacttcgggaagacgtggcaggtttatcgttacttcgcctac
gactgtgagacgtccttcccctacatttcccagggtccaatgcagaaggtcgatgatgtc
atctgtgactcacgttactccgacatcgagccgtctactgagggagaggtgattttcaga
gttctggacccggccttcaggatcaacgacccctacagccccagaatccagaacatgctg
aagatcacgaacctgcgggtgaagttcaccaagctgcacacgctgggtgacaacctgctg
gactctcgcatggagatcaaagagaagtactactacgctgtctacgacatggtggtccga
ggaaactgcttctgctacggacacgcctctgagtgtgcccccgtccagggcgccggacag
accagggagggcatggttcacggtcactgcatgtgtaaccacaacactaaaggtctgaac
tgtgaacagtgtcaggatttctaccatgaccttccctggagaccagctgagggacgcaac
accaacgcctgcaagaagtgtaactgtaaccagcactctgagtcctgtcacttcgacatg
gctgtgtacattgcatcaggaaacgtcagcggaggcgtttgtgacgactgtcaacacaac
acagctggacacaactgtgagcagtgtcaaccgttctactaccagcacccagagagggac
gtccgagaccccaacatctgccagccctgtagctgcgaccccctcggctctctgcacgga
gggatgtgcgaccgcacgacagacgttggagccggtctgatcgccggtcagtgtcgctgt
aaagtcaacgtggagggagaacgctgcgagcgctgtagaccggcgcactacggtctgagc
gacgggccagacggctgcacagcgtgtacctgcagtcctgtgggaacagttcctggagga
aatccctgcgacagtgaaacaggaagttgtttctgtaaacgtctggtgaccggtcgagac
tgtgaccactgtgtgtctgaacactggggtctcagtaatgatatggatggctgcagacca
tgtgactgtgaccttggaggagctgtcaacaatcagtgtgaccaggtgagtggtcagtgt
gtctgcagagatcacatgttcggtcgtcgctgcgatcaggtcgagtctggattctacttt
gtagctctggatcactacacctatgaggctgaggatgccaaatttggacccggagtgaca
ttggtgccaagaccccaccctcaggaccgtagtcccacctggacaggtattggcctggtc
aacattccagaaggggccttcctggagttctctgtggataacattcctcactcaatggag
tatgacatcctcatccgctatgagcctcagctgcctgaccaatgggaggaggtcctgatg
acagtgatgaggccaggaccaatcagagcagacagccgctgcgttaacactgtacctgat
gacgacaaccagatgacctcacttcaccccggctcacggtatgtggttcttcccagaccg
gtttgttttgaatctggtctgaactacacggtccgcctcagtctaccactgtactcggcc
ctcagcgatgtccagtctccatacacactcatcgactcgattgtgttgatgcctcattgt
aagaacctagagatattcacggcctcagagggcggagactccagcaggaacagcggttgg
gaaactttccagcgttaccgttgtttagagaacagccagagtgtcatcaagacgccgatg
acagacatctgcagaaatttcatcttcagcatctccgccatgttgcaccagggtgctaaa
gaatgtcagtgtgaccttcagggctcgctgagcactgtgtgcgaccccagtgggggtcag
tgtcagtgtcgccccaacgtggtcggcaggaactgtgacagatgttctccagccacgttc
caatttggacccaacggctgcagagcttgtgcatgtgaccctcagggttcacagagtcca
ttttgtgatcagctgaccggtcagtgtgtttgtgtttcgggagcgtatggtcgacagtgt
gatcgctgtctgccgggtcactggggtttccccacctgccgaccctgctcctgcaacgga
cactcggacgactgcgaccccactactggatactgcatcaactgcagggaccagagcacc
ggacacacctgtgacagatgtctggatggttactatggtgacccggtgttgggctcaggt
gaccactgtcgtccctgcatgtgtcccgacggccccggcagccagcggcagtttgcagga
agttgttaccgcagcgacgactcccagcaggccatctgtgtctgcaacactggatacaga
ggtgctcgctgtgacgagtgctcacctggttactatggaaacgccggtgagccagggggg
cagtgtaagccctgtcagtgcaacaacaacatcgacatgttggacccggagtcttgtgac
gctcagaccggcgagtgtctgcgctgcttgtaccacagcgagggcaccgcctgccaggac
tgcaaactgggttactatggcaacgctctgctacaggactgccggaagtgtgtttgtaac
cacctgggcagcgacccctccagctgtccatcatctgactgtcactgcgaccgcagcagc
ggtcagtgtcactgcctccccaatgtcgttggtcaacactgcgaccactgcgcacctgac
acctggaacatggcgagcggcagcggctgtcagacctgcaactgcgacccaaaacactcg
tacgggacgtcctgcaacgagatcagcggtcagtgttcctgtcaccccggcttcggagga
agaacatgcagcgagtgtagagagctgttctggggagacccagagattaaatgtcacgcc
tgtgactgcgaccctcgcggcgtctcccaggatcagtgtaacaaggagagcggtcactgc
gtgtgcgtggagggcgtgtctgggccgcgctgcgacgtctgtgctcgtggattctcagga
accttccccagctgtcggcgctgccatcagtgctttgccgagtgggacgacatcatcggt
caactgaccaatcagacgcaccgcctcgtcaacaaggtcaacgccatcaaagccagcgga
gtcagtggaccgtacaagaagaccattgacagcctggagaggagtgccgccgacatccgg
gtcctcctgaaccagaacccggcttcgcaacctctgaccgagatccagcacctgctgcaa
caggccagtgacctgatgggggccctgagacagatgttgaaccacacagaacagactctg
ctccaggtggaggaccaggactcagctgcagaaaccaaactggactctgtgacgtcggac
gctcagaaactggagcggacagttcaagagctgctggatcaggtcgagttcatcaagaac
tctgacatcagaggggcgacggacagcgtcacaaagtacttcctgcagtctcaggaagct
gaggctcgaaccaacacctccaccatcgacgccggcagcctcgtggaaacgtctggcact
ctacggcaactcacagaggacaaactgaaccaaaccagagaggagttcctgaggagacac
actgagcatgctcagagattggatgacctggcaggagagctacagactctggacctatca
gagatcagccacaagacctgtggccgtccatcagcgggtcaggatttgtgctcctcttcc
tgtggcggtctgggctgcgtggactctgagggtcgggccgcatgtggaggtgaaggatgt
gacggcgtggtgacaacagccgacggtgtctggaggaaggctcgagagtcggaacaggaa
atcctcagcgccatgggggaagtggaaaaactttcaaaaatggtatcggaggccaagctg
aaggcggacgaagcgaagttaagtgctcaggacatcctgacgaagaccaacacgaccaaa
cacagagtggaccagagcaacgaggagctgaggagtctcatcagacagatccgagacttc
ctgacacaggacgccgcggacctggagagcattgagttggtggctaacgaggttctggcc
atgcagatgccgacgacgccggctcagctgcagaacctgactgaggaaatccggcagaag
gttggagaactgggacacgtggagaacatcctgctgcagagcgccgaggacatccagaga
gccgagaacctgctggaccaggcccgccgcgccagcgaggaggctgctgatgtgaaggac
tctgcgcagacagtgaagcgagctctggaagaagctcagagagctcagacggccgccagc
agcgccatccagcaggccgccaccgacatcaggagcaccaacagcctgctgtcatccgtg
cagtcagagactgcagacgcagagttgaagctgaacaacgccacccagaggctgcagagg
ctggagcaggacgtgacgctgctgaaagacaaagctgtgaatgtcactctgagcactgaa
cgggccaatcagaatgcagcaagcatcagacagatcgctgaggaagtcaagaaggacctg
gactcagacctgaaggacaagtacgccacagtggggcagctgattggtcagaaggcaggt
ggcgtcgctgatgccaagaagagggcggagtcactgcagcagaaagccaaagagctgttg
ttgcaggcgagcgacaagctgcagctgctcaaagatctggagaagtcgtacaaggacaac
cagcgaactctggaggtgaaggcggagctgctggtggagctggaggccgccgtgaaggag
ctgctgcaggagatcagccacaaggtcaccgtctatagcacctgtctgttctag
DBGET
integrated database retrieval system