Seriola dumerili (greater amberjack): 111239877
Help
Entry
111239877 CDS
T05606
Symbol
dhx29
Name
(RefSeq) ATP-dependent RNA helicase DHX29
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sdu03012
]
111239877 (dhx29)
Enzymes [BR:
sdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111239877 (dhx29)
Translation factors [BR:
sdu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111239877 (dhx29)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA_DHX29
OB_NTP_bind
Helicase_C
DEAD
HA2_C
DSRM_DHX29
AAA_22
HA2_N
nSTAND3
nSTAND1
DUF6183
AAA_16
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
111239877
NCBI-ProteinID:
XP_022625525
LinkDB
All DBs
Position
Unknown
AA seq
1382 aa
AA seq
DB search
MGGKKKKSAAPVAPAAVAAATGRSGAAAAGNSVAEEAKKQPASNKPAKPAKENKSKAPKT
YSLSNTAQVDTGGVSDKSILKVGIQADLEKKIIRLINDFRQENGDKGPISGRLTNKKLLD
LYTALEKFNFKREHIEEAMKSSVLYGGDLHSALDWLCLNLKDEELPEGFTQQMQEESQRS
RPRFQPPAQQKPAAPSPQAPNSTRKETTKATEKDEAASMKDWILRYAEQSSDEEEEEDDE
GGKKTARNPELEEKFDPNDRYLILTAQLYDTKEMATVAKSKGDKAGQRMAQDRIRIIQQE
MKQLESHPMFNPALKVVDVPQKEKKVVPVSEDKEDITFSLFEQAEKDPPAEKVVKKNEPK
DIRNFDYTARSWTGKSPKQFLIDWVRKNLPKSPAPAFHKVAAGRYWKCKVRIHRPDDFLE
VCPTILTEDSMQAQHLAATLALYNLVKGQSVHQLLPPTYRDVWLEWRDSEQQQQEESRVA
ANKPRDQFISRLLTRLKQQQNQSQGQGCGSQGQDGLGGAGDEEPEESWENLAGLDIGEGG
EEVEDKSEKRGGRKESAGALEASRELLKKLKKSSLAHKLQAEREQLPVFQHRHRVLEALK
RHPVVVVAGETGSGKSTQIPQFLLEELLTGGKAAQPCNIVVTQPRRISATSLACRVSQEL
GCEDGPGSKSSLCGYQIRMENQSGEWTRLLYCTTGVLLRKLQHDRHLSSLTHIIVDEVHE
RSVQSDFLLTILKDVVMRRSDLQLILMSATVDCDKFSNYFNRCPVITIPGRTFPVEVFHL
EDIVEQTGYILEKDSEYSQKILEEEEEVSISVTQKGGKTLQHQEVILRDSSSGWDLGPDL
DHFSSRTRQVLQYMNPNKINMDLLVDLIDYLDKSPQFADLDGAVLVFLPGLAHIQQLYDL
LSSDKRFRDKHRYRIAALHSTLSSKDQAAAFTVPPAGVRKIVLSTNIAETGVTIPDVVFV
IDTGKTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRNGFCFRLYPKYRFDAFMDY
SIPEILRVPLEELCLHIMKCQYGSPEDFLSRALDAPQPQSVSNAINLLRKIGACHPSDHL
LTPLGHHLASLPVNVKIGKMLIYGAILGCLEPIATIAAAITEKSPFSTPMNRKDEANLAK
AALALANSDHLTIYNAYLGWKNSQTEGQRVEMSYCRKHFLNRTALITIEDVKHELMKMME
QAGFWSSRSSSHSKLQTPSLSKQRISVLNAVLAAGLYDSVARVLCTPSVDVLERVACTVE
TPQGRAQVHPSSVNRNLQTHGWLLYQEKVKYTKIYLRDTTLISPFPMLLFGGDIDIQHRE
RLITLDSWIHFQAPVRIGVIFKHLRKLMDSLLEKKLENPRMNLEGERTIQMILDLIKSEH
AA
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaaagaagaagaaatcggccgctccggtggccccggcagcagtagcagcagca
acgggcaggagtggtgccgctgcagcggggaacagcgtggcggaggaagcgaagaagcag
ccagccagcaacaaaccggctaaaccagcgaaagagaacaagtcaaaagctccgaagacc
tacagtctttccaacactgcccaggtcgacacagggggcgtctcagacaagtcgattctt
aaagttggtatccaagctgacctggagaagaagatcatcaggctgatcaatgacttcaga
caggagaatggggacaaagggcccatatcaggcagacttacaaacaagaaactgctggac
ctgtacacagctctggagaagttcaactttaagagagaacacattgaggaagcgatgaag
agcagcgtgctctacggaggggatctgcactctgctcttgactggctctgcctcaacctt
aaagatgaggagttgccagaaggttttacccagcagatgcaggaggagagtcagaggagc
aggcccaggttccagcctccggctcagcagaaacctgccgccccgagcccccaagcaccc
aacagcacccgcaaagagaccaccaaggccacagagaaggatgaagctgcaagcatgaag
gactggatcctgaggtatgcagagcagagcagtgatgaagaggaggaggaggacgatgaa
ggagggaagaagactgcacgcaatcctgaactggaggaaaagtttgacccgaacgaccgg
tatttgatcctcactgctcaactgtatgacactaaagaaatggcaactgttgccaagtcc
aaaggagacaaggcgggtcagaggatggcacaggacaggatacgcatcatacagcaagaa
atgaagcagctggagtctcaccccatgttcaacccagctctaaaagtggtggacgtacct
cagaaggaaaagaaagtagttcctgttagtgaggacaaagaggacatcaccttcagttta
tttgagcaagctgaaaaggaccctcctgctgagaaagttgtgaaaaagaacgagccaaag
gacattcgtaattttgactacacagctcgcagctggaccgggaagtctcccaaacagttc
ctcatcgactgggtccgaaagaacctgcccaagagtccggcaccggcttttcacaaggtt
gctgctggtagatattggaaatgcaaggtgcgtattcataggccagatgattttctggag
gtttgccccaccatcctgactgaggacagcatgcaggctcaacatctggcagccacactg
gcgctctacaacctggttaaaggacagtcagtgcaccagctccttcctccaacctacaga
gatgtgtggttggagtggagagacagcgagcagcagcaacaggaagagagtcgtgttgct
gccaacaaacctcgagaccagttcatctcccggctcctgaccagactcaaacagcagcag
aaccagagccaagggcaggggtgtggatcccaaggccaggatggtctgggcggggctggg
gacgaagagcctgaagagtcctgggagaacctggctggtcttgatattggggagggagga
gaggaagtggaggacaagagtgagaaaagaggagggaggaaggaaagtgcaggagcactc
gaggcatccagggagctcttaaaaaagctgaagaagtcctcacttgcccacaaactgcag
gcagagcgagagcagcttcctgtcttccaacaccggcatcgtgtcctggaggctctgaag
cgccaccctgtggtggtggtggcgggtgagacgggcagcgggaagagtactcagattccc
cagttcctgctggaggagctgttgaccgggggcaaagcggcacagccctgcaacatcgtg
gtgacccagccccgcaggatatctgccacgagcctggcctgcagagtcagtcaggagctt
ggatgtgaggatggacccggatcgaagtcgtcgctgtgcggataccagatccggatggag
aatcagtccggggagtggacccgtctgctgtactgcaccactggagttctgctcaggaaa
ctgcagcatgacagacacctcagctccctgacgcacatcatcgtagacgaggtccacgag
cgcagtgtccagtcagacttcctgctaaccatcctgaaagacgtggttatgaggagatcg
gacctgcagctgatcctcatgagcgccaccgtggactgtgacaagttctccaactacttc
aaccgctgcccagtgatcaccatccctggcaggactttcccagtggaggtgtttcactta
gaggacatcgtggagcagacggggtacatcctggaaaaggactcggagtacagccagaaa
atccttgaagaagaagaagaagtcagcatctctgtcacccaaaaaggcggcaagacatta
caacaccaggaggtgatattgagggactcctcctcaggctgggacctgggtcctgacctc
gaccacttcagtagcaggacccggcaggtgctgcagtacatgaaccctaataagatcaac
atggatttgctggttgaccttatagactacctagacaaatccccacaatttgcagatttg
gatggagccgttctcgtattcctcccaggtctggctcacatccagcagctgtacgacctg
ctctcctcagacaagaggttcagggacaaacacaggtacaggattgctgctctccactcc
actctttcatcaaaggaccaggctgctgccttcacagtgccccctgctggagttaggaag
attgtgttgtcgactaacattgctgagacgggtgtgaccattcctgatgttgtgtttgtc
atcgacactgggaagaccaaagaaaataagtaccatgagagcagccagatgagttctctg
gtggaaacttttgtttccaaagccagcgccctccagaggcaggggagagcgggacgtgtc
cgaaacggcttctgcttcaggctctacccgaaatacaggttcgatgcgttcatggattac
tccataccagagatactacgcgtcccactggaggagctctgtcttcatattatgaaatgt
cagtacggctccccggaggacttcctgagccgggccctggatgctcctcagccccagtcg
gtcagtaacgccatcaacctgctgaggaagattggtgcgtgtcaccccagcgatcacctc
ctcacccctctgggacaccacctggcgagtctgcccgtcaacgtgaagatcggcaagatg
ctgatctatggagccatcctcggctgcctggagcccatagcgacgatcgcagcagccatc
actgagaagtctcctttctccacaccaatgaacagaaaggatgaagctaacctggccaaa
gctgcactggcattggccaactctgatcacctgaccatatacaatgcatatctggggtgg
aagaactcacagacggagggacagagagtagagatgtcctactgtaggaaacacttcctc
aatcgaacagctctcattacaatagaggatgtgaagcacgagctgatgaagatgatggag
caggccggtttctggtcgtctcgctcctcttctcactccaagctgcagacaccctcgctg
tccaagcagcggatctcggtcctgaacgcagtactggcggcagggctctacgacagcgtg
gcgcgggtcttgtgcaccccctccgtggacgtgctcgagcgagtggcctgcacagtggag
acccctcagggcagggcgcaggtccatccctcatcggttaaccgcaacctgcagacacac
ggctggctgctgtaccaggagaaggtgaaatacactaagatctacctgcgggacaccact
ctgatatctcctttccccatgctgctgtttggaggcgacattgatattcagcacagagag
aggctcatcacgctagacagttggatacactttcaggctcctgtacggattggtgtgatc
ttcaaacacctgaggaagctgatggactctttgcttgaaaagaagcttgagaatcccagg
atgaatctggaaggtgagaggaccatccagatgattctggatctgatcaaatcagaacat
gctgcgtga
DBGET
integrated database retrieval system
