Seriola dumerili (greater amberjack): 111239927
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Entry
111239927 CDS
T05606
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04136
Autophagy - other
sdu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111239927 (atg13)
04136 Autophagy - other
111239927 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111239927 (atg13)
03029 Mitochondrial biogenesis [BR:
sdu03029
]
111239927 (atg13)
Membrane trafficking [BR:
sdu04131
]
Autophagy
Autophagosome formation proteins
ULK complex
111239927 (atg13)
Atg1 complex
111239927 (atg13)
Mitochondrial biogenesis [BR:
sdu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
111239927 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
111239927
NCBI-ProteinID:
XP_022625592
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLSGLGEGFQTVRVGVVGTPV
GTVTLSCAYRTNLAFMSNRQFERSAPIMGIIVDHFVDPPGSNLRPANVGHPCNYRAPDED
DGLFAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDSLQLPVAPGLVTHTLY
TSRLSYQPPALAGAADLCHPAANPNQMLHAGKEGGVVLVPAHPHHGADAHLTVEHAANTP
GSSGDDDGLTQSGEGRRDEGRRSVSPSDPVESLNAFTRKVGAFVNKPVTQITAASLDLPF
AAFAPRGLDSEENDPMVQPPDSPACPSPLQASLHSQGSEGSGQQDDFVMVDFRPAFSKDD
LLPMDLGTFYREFQNPPQLASLSLHISSQSMADDLDSLPEKLAVYEKNIDEFDAFVDMLQ
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgacttaagtcctcaggataaaaaagacttggacaagttcattaagttcttt
gccttgaagactgttcaggtgatagtccaagcccgtcttggagagaaaatctgcactcgt
tcttcctcatcacctacaggctctgactggtttaatttggcaatcaaagacatcccagag
gtgactcatgaagccaagaaggcactggctggtcagcttccaggcatcggacgctccatg
tgtgttgagatctccctaaagacatcggagggtgactcaatggagttggagacttggtgc
ctggagatgaatgaaaagtgtgataaggacatcaaggtgtcatatacagtatacaaccgt
ctgtctgtccttctgaagtctctcctggccatcaccagagtgacacctgcctacaaactg
tccagaaagcagggacatgactatgtcatattatacaggatttacttcggggaagtccag
ctgagtggattaggggaaggttttcagacagtgcgtgtcggtgtcgttggcacacctgtt
ggcacagtcacactttcatgtgcttaccgcaccaacctggcattcatgtctaacaggcag
tttgagcggtcagctcctatcatggggatcatcgtggatcactttgtggaccctccgggc
agcaacctgcgtcctgcaaatgtgggacacccctgcaactacagagctccagatgaggat
gacggactatttgcaggagttcaggattcacaggaggtctgcaccacctccttctccacc
tcccctccctctcagtgtgtgtgtacactgagtccttctccttctaaactgtctaagccc
ctccctctggacagtctgcagcttccagtggctcctggacttgtcactcacactctctac
acttccaggttatcctaccagcctccagctctagcaggagctgctgatctttgtcaccct
gctgccaatccaaaccagatgttgcatgctgggaaggaaggcggggttgtgttggttcct
gcccatcctcatcatggagcagatgcccatctgacagtagagcatgccgccaacacacct
ggcagcagcggtgatgatgacggtctgacgcagagtggagaaggaaggagggatgaaggg
aggaggagtgtttctccatcagaccccgtggagtctctcaatgcgttcaccaggaaagtt
ggagcctttgtcaataaaccagtcacacagataacggcagccagtcttgatctgccattt
gctgcatttgctcctcgaggcctggactcggaggagaatgaccccatggtgcagcctcca
gactcacctgcctgcccgtcccccctccaggccagccttcattctcagggctcagaggga
tcagggcagcaggacgatttcgtcatggtcgactttcgacccgccttctctaaagacgac
ttgctgccgatggatttgggcaccttctacagggagtttcagaaccctccacaactggcc
agcctctcactacacatcagctcccagtcaatggccgatgacctggactcgctgccagag
aaactggccgtctacgagaaaaacatagacgagtttgacgcttttgtggacatgctccag
tag
DBGET
integrated database retrieval system
