Sulfitobacter dubius: R1T39_00885
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Entry
R1T39_00885 CDS
T09506
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
sdub
Sulfitobacter dubius
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
Motif
Other DBs
NCBI-ProteinID:
WOI29296
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Position
181761..183722
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AA seq
653 aa
AA seq
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MFKGLGRFGGMGAMAAGAFAAAVLALGAWIGSKRAGPEDAPQTAVAVVPERDATPENATL
APNAVQGVSLGPKGEAATEPQPDAPVKTAEQPAAPAFDEVRRESDGMTVIAGRATPGSTV
SVLKDGKEVASATADGAGKFATLAIIPPSEAGHVLTLLEQDGETKIASEEEIILTPSAPK
NAPIEMAEANPAPEENPVDLIQNDAEQVAGEIDRQSVTAEVATEDTAEAEVKSETSDAMP
RAGTDVVASETTAPKNSDAETMAATDGNAVPVGSISDQATPLAGTATAGPEDTDAQTQTP
ATTATPLAGTGTAGPEAELPKTQGSATGVSGQTDRATATAQATPLAGTGTAEAGETAPLK
QDRAEGEAGEARGTPAQAQATPLAGTSAAEGESTAPSEPDSAAEMVDQPAVASAEVTPSA
ETGTAEENDAAEAAPNATPEPSSVAENTIPQPAEPTPTPERDTGTAPAQPSAPAPVLKST
AEGVERLDTAPPQVMTNVALDTIGYSDQGDVQLAGRAQPDTSEVRVYLNNNAVINLPVDQ
EGRWRGDLPNVDEGVYTLRVDELSRAGDVTSRVETPFKRESPEVLAAATEGLSGPLSAVT
VQKGDTLWAISRDRYGDPLLYVKVFEANSANIRDPDLIYPGQVFDLPEEPATE
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagggacttggccggtttggcggcatgggggcgatggcggcgggcgcctttgcg
gcggcggtgctcgcacttggggcgtggatcggcagcaaacgcgccgggccggaagacgcg
ccgcaaaccgctgttgccgtggtgcccgaacgcgatgccacgccagaaaatgccacgctt
gccccgaatgccgttcagggcgtttctcttggccctaagggggaggccgcgacagaaccc
cagccagatgcgcccgtgaaaaccgctgaacaacccgcagcgcctgcctttgacgaagtg
cgccgcgaaagcgatggcatgaccgtgatcgcaggccgcgcgacgccgggcagcaccgtg
tctgtgctgaaagatggcaaagaagtcgccagcgcgaccgctgatggagccgggaaattt
gcaacccttgcgatcatcccgcccagtgaggcgggtcatgtgctgacccttttggagcag
gatggtgagaccaagattgcatcggaagaagagatcatccttaccccctccgccccaaag
aatgcaccaattgagatggcagaggcgaaccccgcgcctgaggaaaacccggttgatctg
atacagaacgatgcagagcaggtggccggagagatagaccgccagagtgtaactgctgag
gttgccacggaggatacggctgaggcagaggttaaatctgaaacctcagacgctatgccg
cgcgctggaactgacgtggttgcgtccgaaacgacggccccgaaaaacagtgacgcagag
acgatggctgcgacggatggcaatgcagtacctgtgggttcaatatctgaccaagcgact
cctttagcgggcactgcgaccgctggacctgaagacaccgatgcgcaaacccagacacct
gcaaccactgccacgccgctggccgggacaggcaccgctgggcctgaagcagagcttccg
aaaacgcaaggcagtgcgactggggtgtcaggccaaacagatcgcgccactgcaacggct
caagcgacaccgctggcagggaccggaaccgctgaggctggcgagactgcgccattgaag
caagaccgcgccgagggtgaggcaggcgaagcccgcggcacgcccgctcaggcccaggca
acaccgcttgcaggtaccagcgctgccgagggcgagagcaccgcgccttcggaaccagac
agcgctgctgaaatggtggatcagcctgctgtcgcctcggctgaggttacaccatcggct
gagacaggaaccgcagaagaaaacgatgcggcagaggcggcgccgaatgcgacgcccgaa
ccctccagcgtcgcggaaaacaccatccctcaacccgcagagccgacccctacaccagag
cgggataccgggaccgccccggctcagccatctgcgccagccccggtgctgaaatccacg
gccgagggggtggagcggctcgacaccgcgccgccgcaggtgatgaccaatgttgcgctt
gataccatcggctattccgatcagggtgacgtgcagcttgcaggccgtgcgcagccggac
accagcgaagtgcgggtctatctgaacaataacgcggtgatcaacctgccggtcgatcaa
gagggccgctggcggggcgatctgccgaacgtcgatgagggcgtctataccctgcgcgtg
gatgagctttcccgcgcgggcgatgtgacgagccgggtggagacacccttcaagcgcgaa
tcccctgaggtgctggccgctgccaccgaggggctgagcggcccgctgagcgctgtgacg
gtccagaaaggcgacacgctctgggcaatctcacgtgaccgctacggcgacccattgctc
tacgtgaaagtgttcgaggccaatagcgccaatatccgcgaccccgatctgatctacccc
ggacaggtctttgacctgccagaagaacccgcaacggagtga
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