Sulfitobacter dubius: R1T39_01130
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Entry
R1T39_01130 CDS
T09506
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sdub
Sulfitobacter dubius
Pathway
sdub03030
DNA replication
sdub03430
Mismatch repair
sdub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R1T39_01130
03430 Mismatch repair
R1T39_01130
03440 Homologous recombination
R1T39_01130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdub03032
]
R1T39_01130
03400 DNA repair and recombination proteins [BR:
sdub03400
]
R1T39_01130
Enzymes [BR:
sdub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R1T39_01130
DNA replication proteins [BR:
sdub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R1T39_01130
DNA repair and recombination proteins [BR:
sdub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R1T39_01130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
AAA_16
AAA_5
NACHT
AAA_14
DUF3772
Mg_chelatase
AAA_33
AAA_24
NTPase_1
AAA_25
Pilus_CpaD
nSTAND3
AAA_2
Motif
Other DBs
NCBI-ProteinID:
WOI29343
LinkDB
All DBs
Position
complement(231110..232222)
Genome browser
AA seq
370 aa
AA seq
DB search
MTDDAPQPDRVEGARHPRDTPKLIGQSAAEAAFLDAFNSGKLHHAWMLTGPRGVGKATLA
WRIARFLLATPDPDGGMFDLPPADTLEIDPEHPVARRVAAGAEAGLKSVTRTLNPDTKKM
RKQIVVDDIRALNGFFQMSAADGGRRVVIIDDADEMNPNAANALLKMLEEPPERAILLLL
SHQPSSLLPTIRSRCRTLRLGTLDADQMAEALAGSGVEVEDDPAALSELSGGSVGGALRL
SLMGGVKTYADLVGLISSLPQMDRGRAIKLAEAAAQRGGEAKLDLLFTLLDLLLVRLART
GATGAPPARAACPDEITVLQRLSPSPAQGRAWADAAQQISDRARHGLAVNLDPAALVLDT
LRQIGQTAPR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgacgccccccagccagaccgtgtggaaggtgcccgccacccgcgcgacacg
ccgaaactgatcggccaaagcgcagccgaggctgcctttctcgacgcttttaacagcggc
aagttgcaccacgcttggatgctcaccggcccacgcggtgtcggcaaagcgacgctggca
tggcgcatcgcgcggtttcttttggccacgcccgaccccgatggcggcatgtttgatctg
cccccggctgacacgcttgagatcgaccccgagcatcctgtcgcccgccgcgtggccgcc
ggcgccgaagcggggctgaaatccgtcacccgcacgctgaaccccgacaccaagaagatg
cgcaagcagatcgtcgtcgatgacatccgcgctttgaacggcttcttccagatgtccgcc
gccgacgggggccgacgcgtggtcatcatcgacgacgcggatgagatgaaccccaacgcc
gccaatgccttgctcaagatgctggaagaacccccagagcgggcgatcctgctgctgctg
agccaccaaccctccagcctgctgcccaccatccgctcgcgctgccggacgctgcggctc
ggcacgcttgacgcggaccagatggccgaggcgctggccggctcgggggtggaggtcgaa
gacgatcccgccgcactgtccgagctgtccggcggctcggtcggcggggcgctgcgcctg
tcgctgatgggcggggtcaaaacctatgccgatctcgtcggactaatctcctcactccct
cagatggaccgaggccgcgccatcaaactggccgaagccgcagcacaacgcgggggggag
gccaagctcgacctgctctttaccctgctcgacctgctgctggtccgtctggcgcgcacc
ggggccaccggtgcgccgcctgcgcgtgccgcctgccccgatgaaatcaccgtgctgcaa
cgcctctcgcccagccccgcacaggggcgcgcatgggccgatgcggcgcagcagatatcc
gaccgcgcccgtcacgggctggcggtgaaccttgaccctgccgcgctggtcctagatacc
ctgcggcaaataggccagacggcgccgcgatag
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