KEGG   Sulfitobacter dubius: R1T39_01895
Entry
R1T39_01895       CDS       T09506                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sdub  Sulfitobacter dubius
Pathway
sdub00010  Glycolysis / Gluconeogenesis
sdub00020  Citrate cycle (TCA cycle)
sdub00260  Glycine, serine and threonine metabolism
sdub00280  Valine, leucine and isoleucine degradation
sdub00310  Lysine degradation
sdub00380  Tryptophan metabolism
sdub00620  Pyruvate metabolism
sdub00630  Glyoxylate and dicarboxylate metabolism
sdub00640  Propanoate metabolism
sdub00670  One carbon pool by folate
sdub00785  Lipoic acid metabolism
sdub01100  Metabolic pathways
sdub01110  Biosynthesis of secondary metabolites
sdub01120  Microbial metabolism in diverse environments
sdub01200  Carbon metabolism
sdub01210  2-Oxocarboxylic acid metabolism
sdub01240  Biosynthesis of cofactors
Module
sdub_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sdub_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sdub_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sdub_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sdub00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    R1T39_01895 (lpdA)
   00020 Citrate cycle (TCA cycle)
    R1T39_01895 (lpdA)
   00620 Pyruvate metabolism
    R1T39_01895 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    R1T39_01895 (lpdA)
   00640 Propanoate metabolism
    R1T39_01895 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    R1T39_01895 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    R1T39_01895 (lpdA)
   00310 Lysine degradation
    R1T39_01895 (lpdA)
   00380 Tryptophan metabolism
    R1T39_01895 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    R1T39_01895 (lpdA)
   00670 One carbon pool by folate
    R1T39_01895 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdub04147]
    R1T39_01895 (lpdA)
Enzymes [BR:sdub01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     R1T39_01895 (lpdA)
Exosome [BR:sdub04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   R1T39_01895 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_binding_2 HI0933_like DAO NAD_binding_8 FAD_oxidored Lys_Orn_oxgnase AlaDh_PNT_C FAD_binding_3 Thi4 2-Hacid_dh_C 3HCDH_N PTRF_SDPR
Other DBs
NCBI-ProteinID: WOI29485
LinkDB
Position
382238..383632
AA seq 464 aa
MAAKSFDLIVIGAGPGGYVAAIRGAQLGLKVAVVERENLGGICLNWGCIPTKALLRSAEV
FHLMHRAKDFGLAADKIDYDLAAVVKRSRGVAKQMESGVKHLLKKNKVEVFMGEASIPAK
GKVSVKTEKGSEDLTAENIVLATGARARELPGLEADGKRVWTYRHALQPAHDPKKLLVIG
SGAIGIEFASFYNTLGADTTVVEVMDRVLPVEDEEISKFAKKAFEKQGMTIMQKATVKKL
DRSAEKVTAHIERDGKVEKLEFDTVISAVGIVGNTEGLGLEELGVKVDRTHVVTDEYCRT
GVDGLFAIGDIAGAPWLAHKASHEGVMVAELIAGQKPHPVKPESIAGCTYCHPQVASVGL
TEAKAKEQGYDIKVGRFPFIGNGKAVALGEPEGMVKTIFDAKTGELLGAHMVGAEVTELI
QGYVVGRQLETTEEDLMNTVFPHPTLSEMMHESVLDAFDRVIHM
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggctgccaaatcctttgatctgatcgtgatcggtgcggggccgggcggctatgtcgcc
gccatccgtggcgcacagcttggccttaaggtcgcggttgttgagcgggaaaatctgggc
ggtatctgtctcaattggggctgcatcccgaccaaggcgctgctgcgctctgccgaagtg
ttccatctgatgcaccgcgccaaggattttggtctggctgcggataagatcgactatgat
ctcgctgccgtggtcaaacgttcgcgcggcgttgccaaacagatggaaagcggcgtcaaa
cacctgctgaagaagaacaaggtcgaggtcttcatgggcgaagcctcgatccccgcgaag
gggaaggtttccgtcaaaaccgaaaagggcagcgaagatctgacggccgagaacatcgtt
ctggccaccggcgcacgtgcccgggagctgccggggcttgaggccgacggcaagcgggtc
tggacttaccgccacgccctacagcctgcccatgaccccaaaaagcttttggtgatcggc
tctggcgccatcggcattgaatttgctagcttctacaacacgctcggcgccgatacgact
gtggtcgaagttatggatcgcgttctgcctgtagaagatgaagaaatctctaaattcgcc
aagaaggcctttgagaagcagggcatgaccatcatgcaaaaggccacggtcaaaaagctc
gaccgttccgccgagaaggtcaccgcccatatcgaacgcgacggcaaagtcgaaaagctg
gagttcgacaccgtgatctctgcggtcggcatcgtcggcaataccgaagggctggggctt
gaagagctcggcgtcaaagtggaccggacccatgtggtgacagacgaatactgtcgtacc
ggcgtcgacgggctctttgccatcggtgacatcgccggtgccccatggttggcgcataag
gcaagccacgagggtgttatggtggctgaactgatcgccggccaaaagccgcacccggtc
aaacccgaaagcattgcgggctgcacctattgccacccgcaggtcgcctcagtcggcctg
accgaggccaaggccaaagagcaaggctatgacatcaaagtcggacgattcccctttatc
ggcaacggtaaggccgtggcgttgggtgagcctgaagggatggtaaagaccatttttgac
gccaaaacaggcgagcttctgggtgcgcatatggttggggctgaggtgacagagttgatc
caaggctatgtcgtgggccgtcagttagagacgacggaggaagacctgatgaacacggtc
ttcccgcatccgacactgagcgagatgatgcatgaatccgtgctcgatgctttcgaccgc
gtgattcatatgtaa

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