Sulfitobacter dubius: R1T39_02805
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Entry
R1T39_02805 CDS
T09506
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sdub
Sulfitobacter dubius
Brite
KEGG Orthology (KO) [BR:
sdub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdub03016
]
R1T39_02805 (rnd)
Enzymes [BR:
sdub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
R1T39_02805 (rnd)
Transfer RNA biogenesis [BR:
sdub03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
R1T39_02805 (rnd)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
WOI29654
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All DBs
Position
565140..566297
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AA seq
385 aa
AA seq
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MKTITTTADLAQFCEEAARHDYVTVDTEFLRERTYYSKLCLVQLAMPGTDDSNAVLVDPL
AEGISLEPLYTLFRDTSVVKVFHAARQDLEIFFVDAEVFPEPLFDTQVAAMVCGFGEQVG
YETLVRKIAHQALDKTSRFTDWSRRPLTEAQKTYALADVTHLRQIYEFLAGKLEQTGRAR
WVAEELETLLSPDTYVTQPQDAWKRVKTRTNSPKFLAIVRELAAFREDYARTRNIPRNRV
FKDDALVELASLKPSNGEELNRARLLLREARKGEIAEGILKAVAAGVACKAADMPQPDRK
REKLQVNPALADLLRVLLKAKTESAGVAAKLIASASDLDMLSAGERDVQALRGWRLEVFG
ADALLLCEGKIALAADGNDVKTVKV
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccatcaccacgacagccgatctcgcgcaattctgtgaagaggcggcccgccat
gattatgtgaccgtcgacaccgaatttctgcgcgaacgcacctactattccaagctctgc
ctcgttcaactggccatgcccggcaccgacgacagcaacgcggtactggtcgatccgctg
gccgaaggcatttcgcttgaaccgctctacacgctctttcgcgacacgtcggtggtgaag
gttttccacgccgcgcggcaagaccttgagattttctttgtcgatgccgaagttttccct
gagccgctgttcgacacccaagtggccgcgatggtctgcggctttggtgaacaggtgggc
tatgagacactggtccgcaagatcgcccatcaggcgctggataagacatcgcgctttacc
gattggtcgcgccgcccgctgaccgaagcacagaaaacttatgcgctggccgacgtcact
cacctgcgccagatttacgagtttctggccggtaagcttgagcagacaggccgcgcacgt
tgggttgctgaagagctcgaaacattgctcagccccgatacctatgtgacccaaccgcag
gatgcgtggaaacgtgtcaaaacccggaccaattcgccgaagttcttggcgatcgtacgg
gaactggctgcattccgtgaggactatgcccgcacccgcaatatcccgcgcaaccgggtg
tttaaggatgacgcgctggtcgaattggccagcctcaagccttcgaacggagaagagttg
aaccgcgcccgtctgctgctccgcgaggcccgcaagggtgaaatcgccgagggcatcttg
aaagccgtggccgcaggcgtcgcttgcaaagccgccgacatgcctcagcctgaccgaaag
cgcgagaagctgcaggtgaacccggcgctggccgatcttttgcgtgtgctgcttaaagcc
aagaccgaaagcgcgggcgtcgcggccaagctgatcgcttcggccagtgatttagacatg
ctttcggccggggagcgcgatgtgcaagcgctgcgcggctggcggctcgaagtctttggc
gccgatgcattgctgctttgcgagggcaaaatcgccttggcggcagacggcaatgacgtg
aaaaccgtaaaggtctga
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