Sulfitobacter dubius: R1T39_04740
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Entry
R1T39_04740 CDS
T09506
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
sdub
Sulfitobacter dubius
Pathway
sdub00550
Peptidoglycan biosynthesis
sdub01100
Metabolic pathways
sdub01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sdub00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R1T39_04740
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
R1T39_04740
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sdub01003
]
R1T39_04740
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdub01011
]
R1T39_04740
Enzymes [BR:
sdub01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
R1T39_04740
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
R1T39_04740
Glycosyltransferases [BR:
sdub01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
R1T39_04740
Peptidoglycan biosynthesis and degradation proteins [BR:
sdub01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
R1T39_04740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
SHOCT
Motif
Other DBs
NCBI-ProteinID:
WOI30015
LinkDB
All DBs
Position
complement(952224..954779)
Genome browser
AA seq
851 aa
AA seq
DB search
MFRFVLSFLGGIFTTLTLAVGMVALTIGAVFWMYGRDLPSHESLAQYTPPTISRIYSGQG
RLIDEFAKERRLFAPASTIPDLVKQAFISAEDKNFYTHEGYDLRGIGAAAVDAVKSRGRD
VRGASTITQQVMKNFLLSGDRRAERKIKEIILATRIEETLSKEKILELYLNEIFLGQNSY
GVAAASQTYFNKTLSELAPHEAAFLASLPKAPSDYHPVRRKDRLLARRNFVLREMKENGY
ITAAEYETEVALPLRSVQNGDFESFKAELPPRDYFTDEIRRQLSEDFGEGEFFTGGLTVR
ATIDNEMQPVAANALRLQLEQYDRGQGIWRGTRFDIPAEQLTSEEKWRAALADLRVPRDI
DLENQWYPAVVLEVGNNDARVGIEGVEEDEDGHWIPAKDVQWARKRLDDGKLGRKAQVAG
DLLDVGEVVLVRRMTSDSDGSFIRWTLRQVPEVQGGFVAMDVHTGRVIAMQGGFSYQSSV
FNRSTQAKRQPGSSFKPFVYASALDSGYSPATIVVDAPIEINTPQGVWRPQNASHKFYGP
APLRTGIEQSRNLMTIRLAQEVGMDVVGSYAERFGVYDDLAPLLSNALGSQETTLYQMVS
AYAMFANGGERVQPTLVDRVQDRYGRTVYKHDERKCYDCEQINLAPGAAPRIISNRERVM
DPVTAYQLTSMMRGVVERGTARNAINLPVPIAGKTGTTNDEKDAWFVGFSSNVVAGCYIG
FDTPRPMGRGAGGGRLCAPVFQRFMSEAIKKYGGGDFKVPEQCRFIKIDRFTGARLSDSA
TGANVVSECFRNGEEPLFGIAFDGGFAMGADLPLVEELGGSSSREVTTSTGKKATVGPKA
SFGTLSSGGLY
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
gtgtttcgatttgtcctgtcctttttggggggtatctttaccaccctgaccctggccgtc
ggcatggtcgctttgaccatcggcgcggtgttctggatgtatggccgggatctgcccagc
catgagtcgctggcccaatacacgccgccgacaatcagccggatctactcgggccaaggt
cgtttgattgatgaattcgccaaggaacgtcgtctgtttgccccggcaagcacgatcccc
gatttggtaaaacaggcgttcatttcggcggaagacaaaaatttctacacccacgaaggc
tatgacctgcgcggcattggtgcggcggcggttgatgcggtgaaatcacgcgggcgcgat
gtgcgcggtgcatcgacgatcacgcagcaggtaatgaagaactttctgctgtccggcgac
cggcgggccgagcgcaaaatcaaagaaatcatcctcgctacgcggatcgaagagacgctg
agcaaagagaagatccttgagctgtatctcaacgagatttttctcggtcagaactcctat
ggggttgctgcggccagccagacatatttcaacaaaacgctgagcgagttggccccgcat
gaagcagctttccttgcctcactgcccaaagcgccgtcggactatcacccggtgcgccgc
aaggaccggctgctggcgcggcggaacttcgtgctgcgcgagatgaaagagaacggttat
atcactgcggcggaatatgagaccgaagtggcgctgccgctacgctcggttcagaatggc
gatttcgagagcttcaaggctgaactgccgccccgtgattactttaccgacgaaatccgc
cggcagttgagcgaagatttcggcgagggtgagttctttacaggcggtctgaccgtgcgc
gcgaccatcgacaatgaaatgcagcctgttgccgccaatgcgctgcgtcttcagcttgag
caatatgaccgagggcaaggtatttggcgcggcacgcgctttgacattccagccgagcag
ttgaccagcgaagagaaatggcgcgccgccctcgcggacctacgggtgccacgcgatatc
gatttggaaaaccaatggtatccggcagtggtgctggaggtgggcaataacgacgctcgc
gttgggatcgaaggcgttgaagaagacgaagacggccactggattcccgcgaaagacgtg
cagtgggcgcgcaagcggctggatgatggtaaacttggccgtaaggcgcaggttgccggg
gacctgctcgacgtgggtgaagttgtgctggtacgccgcatgacctcggacagcgatggg
tcgttcatccgctggaccctgcggcaggtgccagaagtgcagggcggtttcgttgcgatg
gacgtgcatacaggccgtgtgattgcgatgcagggcgggttctcctaccagtcgagcgta
tttaaccgctcaactcaagccaagcggcagccggggtcgagcttcaagcccttcgtctat
gcctccgcgctggacagtggatatagcccggcgaccatcgtggtggacgccccgattgag
atcaacacaccgcagggtgtgtggcggcctcagaacgcgtcgcataagttctatgggccc
gcgccactgcgtaccgggatcgaacagtcgcggaacttgatgaccatccgtctggcccaa
gaggtcggcatggatgtggtcggcagctatgctgaacgctttggcgtttacgacgatctc
gcaccgctgctgtccaacgcgcttggcagtcaggaaaccacactttaccaaatggtgtcg
gcctatgcgatgttcgccaatgggggggaacgggttcagcccacactggtggatcgggtg
caggaccgctatggccgaaccgtctacaaacatgacgagcgcaaatgctacgactgtgag
cagatcaacctcgcgccgggcgcagcgcctcggatcatctcgaaccgtgagcgggtgatg
gacccggtgacggcctatcagctgacctcaatgatgcgcggcgtggtagagcgcggcacg
gcccgcaatgccatcaatctgccggtgccaatcgcgggcaagaccggcaccaccaacgat
gagaaagacgcgtggttcgtcggattctcgtccaatgtggtagcgggatgttacatcggt
ttcgatacgccgcgcccgatgggtcgcggggcaggcggcgggcgtctttgcgcaccagtg
ttccagcgctttatgtctgaggcgatcaagaaatacggcggcggtgatttcaaagtcccc
gagcagtgccgtttcatcaagatcgaccgtttcaccggcgcacggctgagcgatagcgcg
acgggtgccaacgttgtgtcggaatgtttccgcaatggcgaagagccgctttttggcatc
gctttcgacggcggttttgccatgggcgcggacttgcctctggtcgaagaactgggcggt
tcctcctcgcgtgaggtcaccacatcgaccggcaaaaaggccaccgtaggccccaaggcg
agctttggcacgctcagctccggcggtttgtactaa
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