KEGG   Sulfitobacter dubius: R1T39_05700
Entry
R1T39_05700       CDS       T09506                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
sdub  Sulfitobacter dubius
Pathway
sdub00470  D-Amino acid metabolism
sdub00550  Peptidoglycan biosynthesis
sdub01100  Metabolic pathways
sdub01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:sdub00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    R1T39_05700
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    R1T39_05700
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    R1T39_05700
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sdub01011]
    R1T39_05700
Enzymes [BR:sdub01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     R1T39_05700
Peptidoglycan biosynthesis and degradation proteins [BR:sdub01011]
 Precursor biosynthesis
  Amino acid ligase
   R1T39_05700
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp_3
Other DBs
NCBI-ProteinID: WOI30199
LinkDB
Position
complement(1137644..1138567)
AA seq 307 aa
MGKSSGQTPTVAVLMGGPSAEREVSLSSGRACAAALREHGGYNVVEVDAGRELAAVLADL
KPFAVLNCLHGRWGEDGCVQGLLEWLHIPYTHSGVLASALAMDKQRSKDVFRHAGLPVLE
SVIAPKADVMASHVMAPPYVVKPNNEGSSVGVYLVAEENNGPPQLSDDMPAEVMVETFAP
GRELTTTVMGDRALAVTDIITTGWYDYDAKYKPGGSRHVVPADLPQEITDLCFDYARRAH
AALGCKGVSRTDFRWDEARGVDGLILLETNTQPGMTATSLSPEQAAACGISFPELCAWMV
EDASCDR
NT seq 924 nt   +upstreamnt  +downstreamnt
gtgggtaagtcgagcggacagaccccgacagtggcggtattgatgggcggcccctcggct
gagcgtgaggtgtctttgtccagtgggcgtgcatgcgccgctgccttgcgggaacatggc
ggatataacgtggtcgaggtcgatgcaggccgcgagctcgctgccgtacttgccgatctg
aaaccctttgccgtattgaattgcctgcatggccgttggggcgaagatggctgtgtgcag
ggcctgcttgagtggctgcatattccttatacgcattctggggtgctggcctcggcgctg
gcgatggacaagcagcggtctaaagacgtgttccgccatgcggggctgccggtgctggaa
agcgtcatcgcgcccaaggccgatgtgatggcctctcatgtcatggcgccgccctatgtg
gtcaaacccaacaacgaaggctcctcagtcggcgtttacctcgtggccgaggaaaacaac
ggcccgccgcaactgtcggacgacatgcccgccgaggtgatggtcgagacctttgccccg
gggcgtgagttgacgaccaccgtgatgggcgaccgtgcgctggcggtgacggatatcatc
accaccggctggtatgattacgacgcgaaatacaagcccggcggctcgcgccacgttgtg
cccgccgatctgccgcaagagattaccgatctgtgtttcgactatgcccgccgcgcccat
gcggcgcttggctgcaaaggcgtcagccgcaccgatttccgttgggatgaggcacgcgga
gttgacgggttaatcctgcttgagaccaacacccagcccggcatgaccgccacttcgctc
tcgcccgagcaggccgcagcctgcggcatttcattccctgagctttgcgcttggatggtg
gaggacgcctcatgcgatcgctga

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