Sulfitobacter dubius: R1T39_05815
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Entry
R1T39_05815 CDS
T09506
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sdub
Sulfitobacter dubius
Pathway
sdub03420
Nucleotide excision repair
sdub03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sdub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R1T39_05815
03430 Mismatch repair
R1T39_05815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdub03400
]
R1T39_05815
Enzymes [BR:
sdub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R1T39_05815
DNA repair and recombination proteins [BR:
sdub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R1T39_05815
MMR (mismatch excision repair)
Other MMR factors
R1T39_05815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
WOI30222
LinkDB
All DBs
Position
complement(1159957..1162374)
Genome browser
AA seq
805 aa
AA seq
DB search
MSDFDEMDAFEGASLSARAMAARPQPYLEGLNPAQRAAVETLDGPVLMLAGAGTGKTRAL
TARIVHLLNTGRARPNEVLAVTFTNKAAREMKNRVGQMLGQQVEGMPWLGTFHAICVKLL
RRHAELVGLKSNFTILDTDDQLRLLKQLVAAEGIDDKRWPARMLAGIIDGWKNRALTPDK
IPSADAGAYNHRGPEIYAQYQRRLIELNATDFGDLLLHMVTIFQAHPDVLAQYQRWFKYI
LVDEYQDTNVAQYLWLRLLAQGHKNICCVGDDDQSIYGWRGAEVGNILRFETDFPGAHVV
KLEQNYRSTPHILAAASGVIAGNEGRLGKTLWTEETEGEKIRLIGHWDGEEEARWIGDEI
ESAQRGTRGLDPFSLDDMAILVRASHQMRAFEDRFLTIGLPYKVIGGPRFYERLEIRDAM
AYFRVVTSPDDDLAFERIVNTPKRGLGERAQQKIQRTARDHGVNLVEGARILLAHDGIGG
KGAAQLRLLIEGIDRWSSMLRGPRIEISEDDNVLDDGIAPLRVDYGPPEVSHVELAEMIL
DESGYTGMWQNDKTPEAPGRLENLKELVKALEGFENLQGFLEHVSLIMDNEQEGDGEKVS
IMTLHAAKGLEFPMVFLPGWEDGLFPSQRSMDESGIKGLEEERRLAYVGITRAEQICTIS
FAANRRVFGQWQNAMPSRFVDELPEEHVDVLTPPGLYGGGFGAAMPQSDLHDRAASANVY
NSPGWKRLQSRSGARGTSQPRESRNVTIDMQAVASFEMGERVFHDKFGYGEVIGMEGDKM
EVAFEKAGTKKVVSRFLTGGKDVPF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattttgacgaaatggatgccttcgaaggtgcatcattgtccgcccgcgcgatg
gctgcgcgcccgcagccttatctggaggggttgaaccctgcccagcgtgctgcggtagag
acattggacggccccgtactgatgctcgcaggcgcgggcaccggcaagacacgggcgttg
actgcccgaatcgttcatttgctgaatacggggcgggcacggccgaatgaggttttggcg
gtcaccttcaccaataaggccgcgcgggagatgaagaaccgcgttggtcagatgctgggc
caacaggttgaggggatgccgtggcttggcacgttccatgcgatctgcgtcaagctgctg
cggcgtcacgcggagctggtcgggctaaaaagcaatttcacgatccttgatacggatgat
caactgcgtttgctaaagcaactggtcgccgccgaagggatcgacgataagcgctggcct
gcgcgaatgttggccgggattattgacggctggaagaaccgcgcgctgaccccggacaag
atcccgagcgcggatgctggcgcttacaatcaccgcgggccagagatttacgcgcaatat
caacgccgtctgatcgaactaaacgcgacagactttggcgatttgctgctgcatatggtg
acgatttttcaggcgcacccggatgtgttggcgcagtatcagcgctggttcaaatacatc
ctcgttgatgagtatcaggataccaacgtcgcccaatacctgtggctgcggctcttggcg
caggggcacaagaacatctgctgcgtgggcgacgatgaccagtcgatttatggctggcgc
ggggccgaagtgggcaacatcctgcggtttgagacggatttccccggcgcccatgtggtg
aagctcgagcagaattaccgctcgaccccgcatattctggccgccgcgtcaggcgtgatc
gcgggcaatgaggggcgcttgggcaagaccctgtggaccgaagagaccgagggcgaaaag
attcgcctgatcggccattgggatggtgaggaagaagcgcgctggatcggggatgaaatc
gaatccgcgcagcgcggcacgcgggggctcgacccattttctctcgacgatatggcgatt
ctggtgcgggcgagccatcagatgcgggcttttgaggaccgtttcctgaccatcggcttg
ccctataaggtgatcggaggcccgcgcttttacgagcgcttagagattcgtgatgccatg
gcctatttccgcgtggtcaccagccctgacgatgacttggcgttcgagcggatcgtgaac
acgcccaagcgcggtttgggcgagagggcacagcagaaaattcagcgcacggcgcgggat
cacggggtgaaccttgtcgagggtgcgcggatccttttggcgcatgacgggatcggcggc
aaaggggcggcgcagttgcggctgttgatcgaagggatcgaccgttggtcatcaatgctg
cgcggtccacggattgagatcagcgaagatgataacgtgctggatgacgggattgccccg
ttgcgggtggattacggcccgcccgaggtgtcccatgtcgaattggccgagatgattctc
gacgaaagcggctataccgggatgtggcagaacgacaaaacgcccgaagcgccgggtcga
ctggagaacctaaaagagcttgtgaaagcgctggaagggtttgaaaacctgcaaggtttc
ctcgaacacgtcagcttgatcatggataatgagcaggagggcgatggcgagaaggtctcg
atcatgacgctccacgcggccaaaggattggaattccccatggttttcctgcccggctgg
gaagatgggctgttcccctcgcaacgctcaatggacgaaagcgggatcaagggcttggag
gaagagcggcggttggcctatgtcggcatcacccgcgccgaacagatttgcaccatctcc
tttgccgccaatcgccgggtatttggccagtggcaaaacgcgatgccttcgcgctttgtt
gatgaactgcccgaagagcatgtggatgtgctgaccccaccgggactttacggcggtggg
tttggggctgccatgccgcagtctgatctgcatgaccgcgcggcaagtgcgaatgtctat
aattctccggggtggaaacgcctgcaatcgcgcagtggggcgcggggcaccagccagccg
cgcgaaagccgcaatgtcacgatcgacatgcaggcggtcgcctcctttgaaatgggcgag
cgcgtttttcacgataaattcggctatggcgaggtgatcggtatggagggcgacaagatg
gaagtcgcttttgaaaaggccgggaccaagaaggtcgtgtcgcggttcttgaccggcggg
aaagacgtgcctttctaa
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