Sulfitobacter dubius: R1T39_06135
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Entry
R1T39_06135 CDS
T09506
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K15861
CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein
Organism
sdub
Sulfitobacter dubius
Pathway
sdub02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sdub00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
R1T39_06135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdub03000
]
R1T39_06135
Transcription factors [BR:
sdub03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
R1T39_06135
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
Crp
cNMP_binding
HTH_24
HTH_20
LexA_DNA_bind
MarR
HVO_A0261_N
MarR_2
Sigma70_r4_2
HTH_23
HVO_A0114
Fe_dep_repress
NirdL-like_HTH
HTH_11
Motif
Other DBs
NCBI-ProteinID:
WOI30283
LinkDB
All DBs
Position
1232087..1232758
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AA seq
223 aa
AA seq
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MYVTLSSAFTPAIAAPVGIPNPAPAQRRTLSVGAHLFREGDIANNIYEITSGVFRLSRVL
DDGRRQVIAFGLPGDIIGFPNGTVHHSDCEAIQAGAVISHRRHTLDTLKGDDATHQRLLH
AALREISAMQDHLMMLGRKSAMEKVASFLVTLSDRIGTCRDELTRCALPMSRADIADFLG
LTIETVSRTLTRLRKAGVIAFDRAQTVLIKDKDALLSAAQARV
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgacactttcaagcgcattcacccccgccattgcagcccccgtcgggataccc
aacccggccccggcacaacgccggacgctttcggtgggcgcccatcttttccgcgaaggc
gacatcgccaataacatctacgagatcacctcgggcgtctttcgtctctcccgcgtgctg
gacgacgggcggcggcaggtgatcgccttcggcctgcccggcgacatcatcggctttccg
aacggcaccgtgcatcacagcgattgcgaggcgatccaggccggcgcggtcatctcccac
cggcgccatacgctggacacgctaaaaggagacgacgccacgcaccagcggctgctgcac
gccgccctgcgcgagatttcggcgatgcaggaccacctgatgatgctgggccgcaagtcg
gcgatggagaaggtggcctctttcctcgtcaccctctcggaccgcatcggcacgtgtcgc
gacgagctcacgcgctgcgccctgccgatgagccgcgccgacatcgccgacttccttggc
ctgacgatcgagaccgtcagccgcaccctcacgcggctgcgcaaggccggggtgatcgct
tttgaccgggcgcagacggtgctgatcaaggataaggacgcactgctctcggccgcacag
gcgcgtgtctga
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