KEGG   Sulfitobacter dubius: R1T39_07275
Entry
R1T39_07275       CDS       T09506                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sdub  Sulfitobacter dubius
Brite
KEGG Orthology (KO) [BR:sdub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdub03400]
    R1T39_07275
Enzymes [BR:sdub01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     R1T39_07275
    5.6.2.6  RNA 3'-5' helicase
     R1T39_07275
DNA repair and recombination proteins [BR:sdub03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    R1T39_07275
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 DEXQc_Suv3
Other DBs
NCBI-ProteinID: WOI30498
LinkDB
Position
1464327..1466780
AA seq 817 aa
MRALPPKFADWFAQNGWSLHPHQQEMLDRAEAPALLLIAPTGGGKTLAGFLPTLVDLAED
DHGGMHTLYISPLKALAADIKRNLTRPVEEMRLPIRIEDRTGDTSQSRRRRQRADPPHIL
LTTPESLALLTSYEDAARTFRGLKRVVIDEIHALAESKRGDQLMLALTRLQALCPSLKRV
GLSATVEDPSAIAHLMARHPDPCEVLLADPGPAPDIQMLHTEEAPPWAGGGAAYSIPAVL
EQVRQHKTTLIFHNTRAQAEIFFHNLWLANEDALPIAIHHGSLDRAQREKVEAAMVRGDL
RAIVCTGTLDLGIDWGDVDLIIQIGAPKNVKRLVQRIGRANHRYNAPSKALLVPANRFEV
VECVAALEAVLEGALDGDPRGPGPRDVLCQHILIAACAGPFDADDLFAQVRSAGAYAALS
RADFDACFDFCATGGYALRAYDRWQRLLQRPGGQWQLRDPRAAQRIRMNIGTIQDTDKLK
VRMKRNRGGKPLGEIEEGFAATLTKGDTFLIGGQIVRYEGLRETVVEVSRNAAKKPKVAT
FGGTKFATSTQLSARVQQMFTQDSWPELPRHTAEWLSLQREVSQLPQPGTLLVESFPHDM
AEQTVFYGFAGRNGQQTLGLLLTKRMEDLGLRPLGFVATDYATLIWGLSPVDDPAPLLDP
TVLNEGLDSWLAGNAVMKRTFRAAATIAGLIERNTPQARKSGRQTTFSSDILYDTLHRYE
PDHLMLDITREEALSGLVDFGRIEEMLGRIAGRITHRKLSRVSPLAAPLFLEMGRVPVEG
AGQERMLAEEAERLMEASGLARLTPPPSDQPPWRDGR
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgcgcgccctgccccccaaattcgccgattggttcgcccagaacggctggtccctgcac
ccgcaccagcaagagatgctggaccgtgccgaggctcccgccctgctcctcatcgccccc
acgggcgggggtaaaacgctggccggtttcctgcccaccctcgtcgatctggccgaggat
gatcacggggggatgcacacgctctacatctcgccgctgaaggcgctcgcggcggacatc
aaacgcaacctcacccgcccggtcgaggagatgcgcctgccgatccgcatcgaagaccgc
accggcgacacctcgcaatcgcgtcgccgccgccagcgcgccgacccgccgcatatcctg
ctgaccacgccggaaagcctcgctctgctgacctcctacgaggacgccgcgcgcaccttt
cggggccttaagcgcgttgtgatcgacgagatccacgcgctggccgaaagcaagcgcggc
gaccagttgatgctggcgctgacccgtcttcaagccctctgcccaagcctcaaacgggtg
ggcctctcggccacggtcgaagacccttcggccatcgcccacctcatggcccgccacccg
gacccttgcgaagtgctgctggccgatccgggccccgcccccgacatccagatgctgcac
accgaggaagccccgccttgggccgggggcggtgctgcctattcaattccagcggtgctt
gagcaagtgcgccaacacaagacgacgctgatttttcacaacacccgcgcacaggccgag
attttctttcacaacctctggctcgccaatgaagacgccctaccgatcgccatccaccac
ggcagcttggatcgcgcccaacgcgaaaaggtcgaagccgccatggtccgcggcgatctg
cgtgccatcgtttgcaccggcacgctggatctgggcattgactggggcgatgtggacctg
atcatccagatcggcgcccccaaaaatgtaaagcggctggtccaacgcatcggccgcgcc
aaccaccgctacaacgcaccttccaaggcgcttctcgtaccagcgaaccgctttgaggtg
gtcgaatgcgtggccgccctagaggccgtgctcgaaggcgcactcgacggcgatccgcgc
ggccccggcccgcgcgatgtgctgtgccaacatattctcatcgccgcctgcgcaggcccc
ttcgacgctgacgacctcttcgcgcaggtccgctccgccggggcctacgccgccctgtcc
cgcgccgacttcgacgcctgcttcgacttctgtgccaccggcggctacgccctgcgcgcc
tacgaccgctggcaacgcctgctgcagcgccctggcggccaatggcaattgcgtgatccg
cgcgccgcccaacgcatccgcatgaacatcggcacgatccaagataccgataagctgaag
gtccgcatgaaacgcaaccgcggcggcaaaccgctgggcgagatcgaagaaggctttgcc
gcaacgctcaccaaaggcgacacctttctgatcggcggccaaatcgtacgctacgaaggg
ctgcgcgaaaccgttgtcgaagtcagccgcaacgccgccaaaaagcccaaagtggcgacc
ttcggcggcaccaaatttgccacctccacacagctttccgcccgcgtccaacagatgttc
actcaagacagctggcccgaactgccgcgccacaccgccgaatggctcagcctacaacgt
gaagtcagccaattgccgcagcccggcaccctgctggtcgaaagcttcccccatgacatg
gccgaacaaacggtcttctacggctttgccgggcgcaacggccagcaaacgctgggccta
ttgctgaccaaacgcatggaagacctcggcctgcgccccctaggcttcgtggccacggac
tatgccacgcttatctggggcctctcccccgtcgacgaccccgcgccgctgctcgacccc
actgtactcaacgagggcctcgacagttggctggcgggcaatgccgtgatgaaacgcacc
ttccgcgccgctgcgaccattgccgggctcattgaacgcaacaccccgcaggcccgcaaa
tccggacgacaaacgaccttttccagcgatatcctttatgacacgctgcaccgctatgaa
ccggaccatctaatgctcgatatcactcgcgaagaagcgctcagcggactggtggatttc
ggcagaatcgaagagatgctgggacggatcgccgggcggatcacccaccgcaaactgtcc
cgcgtcagccctctcgctgcaccgctgtttctggaaatgggccgcgtgcctgtcgaaggc
gctggacaggaacgcatgctggcggaagaggccgaaagactgatggaagcctccggcctc
gcgcggctcaccccaccgccctcggatcagccgccttggcgggatggtcgttga

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