Sulfitobacter dubius: R1T39_09920
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Entry
R1T39_09920 CDS
T09506
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sdub
Sulfitobacter dubius
Pathway
sdub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R1T39_09920 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdub03019
]
R1T39_09920 (recQ)
03400 DNA repair and recombination proteins [BR:
sdub03400
]
R1T39_09920 (recQ)
Enzymes [BR:
sdub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R1T39_09920 (recQ)
Messenger RNA biogenesis [BR:
sdub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R1T39_09920 (recQ)
DNA repair and recombination proteins [BR:
sdub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
R1T39_09920 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Rhodanese
ResIII
Motif
Other DBs
NCBI-ProteinID:
WOI28016
LinkDB
All DBs
Position
complement(1980221..1982266)
Genome browser
AA seq
681 aa
AA seq
DB search
MTGAATLLRDVFGFDGFRPGQQEIVEAVTEGENVLAIMPTGGGKSLCFQLPALMREGVTV
VISPLIALMRDQVRSLQEAGVAAGALTSGNTAEETDAVWEALEAGTLKLLYMAPERLAAG
SAMGMLRRVGVNLIAVDEAHCVSQWGHDFRPDYLRIGELRRTLGVPLAAFTATADAETQV
EIVEKLFDGTPPRAFLRGFDRPNIHLAFAAKNKPRDQILNFAAARKGQSGIVYCGTRAKT
EGLAKALRDQGQTALHYHGGMEAEDRRIAERRFQQEDGLIVCATVAFGMGVDKPDIRWVA
HADLPKSIEAYYQEIGRAGRDGAPAETLTLFGPDDIRLRRSQIDEGLAPPERRAADHGRL
NALLGLAEALECRRQTLLGYFDETEITCGRCDLCDTPADVFDGTTAVRKALSAMLRTDEW
FGAGHLIDILLGNETDKVRQRGHQSLPTYGVGGEYSRNEWQAVFRQMMGHDLVRPDAERH
GALRMTDAALPILRGEASINLRRDTIKAAGANRRPAVKAMVSDEDAPLLSALKAKRRALA
EAAHVPAYIIFTDRTLIEMAEARPQNLDAMARIGGVGAKKLENYGAAFLEVINGEAQPMH
KARRKLAGRDAGNVYDQLLQVQADLARGEQGTEKPLSCSAAMLAKVAQLRSADSSAIERL
LGDKRAERFGPAFLDVLRDAG
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgacaggcgctgccacgcttcttcgtgatgtattcggtttcgacgggttccgccccggc
cagcaagagattgtggaggcggtgaccgagggcgagaacgtgctcgccatcatgcccacg
ggcggcggtaaatccttgtgtttccaactgcccgccctgatgcgcgagggggtgacggtg
gtcatctccccgctgatcgcgctgatgcgcgatcaggtgcgcagcctgcaagaagcgggc
gtcgcggcgggtgcgctgacctcgggcaacacagccgaagagaccgacgcggtttgggaa
gcgttggaggccggcacgctcaaattgctttatatggcaccggaacggctcgccgcaggc
tcggctatgggcatgttgcggcgcgtcggcgtcaatctgatcgccgtggacgaggcgcat
tgcgtcagccaatggggccatgacttccgccccgattacctgcgcatcggtgaattgcgt
cgcacgctcggcgtgccgctggcggccttcaccgccacggcggacgccgaaacgcaggtt
gagattgtcgaaaagctgttcgacgggacgcccccgcgcgctttcctgcgcggctttgat
cggcccaacatccacctcgcctttgccgctaaaaacaaaccacgcgatcagatcctgaac
ttcgccgccgcgcgcaaggggcagtcgggcatcgtctattgcggcacgcgggccaagacc
gaagggcttgccaaggcgctgcgcgatcaggggcaaacggcactgcattaccacggcggg
atggaggccgaagaccgccgcatcgctgagcggcgctttcagcaggaagacgggctgatc
gtctgcgccacggtggcctttggcatgggggtcgacaagccggacatccgctgggtcgcc
catgcggatctgcccaagtcgattgaggcctattatcaggagattggccgcgccgggcgt
gatggtgccccggctgaaaccttgaccctctttggccccgacgacatccgcctgcgccgg
agtcagatcgacgaaggcctcgccccgcccgaacgccgcgccgccgatcacgggcggctc
aacgcgctgctcggtttggccgaggcgttggagtgtcgtcgccagaccttgctgggctat
tttgacgagaccgaaatcacctgcggccgttgcgacctctgcgataccccggcggatgtg
ttcgatggcaccacggcagtgcgcaaggcgctctcggccatgttgcgcactgatgaatgg
ttcggcgcggggcatctgatcgacatccttttgggcaacgagaccgacaaggtccgccag
cgcggccaccagtctctgccgacctacggcgtgggcggtgaatacagccgcaacgaatgg
caggccgtgttccgtcagatgatgggccatgaccttgtgcgccccgatgccgaacgccac
ggcgcgctgcggatgaccgatgccgccctgccgatcctgcgcggtgaggcgtcgatcaac
ctgcggcgggatacgatcaaggctgcaggggccaatcgccgacccgcggtcaaggcgatg
gtcagcgatgaagacgcgccgctgctatcggcgctcaaggccaaacgccgcgcattggcc
gaggcggcgcacgtgcctgcctatatcatcttcaccgaccgcaccctgatcgaaatggcc
gaggcgcgcccgcaaaacctagatgccatggcccgtatcggcggcgtgggcgcgaaaaag
ctggaaaactacggcgccgccttccttgaggtcatcaacggcgaagcgcagccgatgcat
aaggcccggcgtaaactggcgggccgcgatgcgggcaatgtctatgaccagttgttgcag
gtgcaggccgatctggcgcgcggcgaacaaggcaccgaaaagccgctgagctgttctgcc
gcgatgctggccaaggtcgcacaactgcgcagcgccgacagctccgcgattgaacgtttg
ctcggcgacaaacgcgccgaacgctttggccccgcctttctggacgttctgcgcgacgcg
ggctaa
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