Sulfitobacter dubius: R1T39_10120
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Entry
R1T39_10120 CDS
T09506
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
sdub
Sulfitobacter dubius
Pathway
sdub00300
Lysine biosynthesis
sdub01100
Metabolic pathways
sdub01120
Microbial metabolism in diverse environments
sdub01230
Biosynthesis of amino acids
Module
sdub_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sdub00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
R1T39_10120 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdub01002
]
R1T39_10120 (dapE)
Enzymes [BR:
sdub01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
R1T39_10120 (dapE)
Peptidases and inhibitors [BR:
sdub01002
]
Metallo peptidases
Family M20
R1T39_10120 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
DHH
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
WOI28051
LinkDB
All DBs
Position
complement(2020077..2021222)
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AA seq
381 aa
AA seq
DB search
MSGLDPAELTAKLVRCASVTPINDGALEVLEEVLGTAGFDCTRVDRGGVCNLFARWGKKG
NHKSFGFNGHTDVVPIGDEADWSVLPFGAEVKDGIMYGRGTTDMKSGVAAFVAAAVDFVG
DTLADGSIVLAITGDEEGDAVDGTTALLDYMAENGERMDVCLVGEPTCPETMGDMIKIGR
RGSMNAHFKVTGKQGHAAYPHRANNPLPAMMRLMDRLASHELDQGSDHFDPSTLAVVTVD
TGNKATNVIPAQCRGAVNIRFNDHHSGDGLSDWLRSEADKIAAEFGVQVDVQIKISGESF
ITPPGALSDLISGAVEAETGVKPELSTTGGTSDARFVKAHCPVVEFGLVGQSMHQVDEHV
RVEHIHQLKSIYARVLRDYFT
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtctcgatcctgctgaactcaccgcgaaactggtgcgctgcgcctctgtgacc
cccatcaacgacggcgcgcttgaagtgctggaggaagttttgggtaccgctgggtttgac
tgcacgcgggttgaccggggcggtgtttgcaacctctttgctcgttgggggaagaagggc
aaccacaagtccttcggctttaacgggcacaccgacgttgtgccaatcggagacgaagcg
gattggtccgtgctgccctttggtgccgaagtgaaagatggcatcatgtatggccgtggc
accactgatatgaaatcgggcgtggcggcctttgtcgcggcggcggtggatttcgtgggt
gacacactggcagatgggtctatcgtgctggcgatcaccggggatgaagagggtgacgcc
gtcgacggaacgacggcattgctggattacatggccgaaaacggcgagcgcatggatgtc
tgtctggtgggcgagccgacctgcccagagacgatgggcgacatgatcaagatcgggcgg
cgcgggtcgatgaatgcgcatttcaaggtgacgggtaaacagggccacgcggcctatccg
caccgggccaacaacccgctgcctgcgatgatgcggctgatggaccgtttggcgagccat
gagttggatcagggcagcgatcattttgatccttccacgctggcggttgtaacggtcgac
actggcaacaaagccaccaatgtaatcccggcccaatgtcgcggtgcggtaaatattcgg
ttcaacgaccaccattccggcgacggcctaagtgattggctgcgcagcgaggcggataaa
atcgcagccgagtttggcgtgcaggtggatgtgcaaattaagatttcgggcgaaagcttt
atcacgccgccgggcgcgctgtctgatctgatctcaggcgcggtcgaggctgagacgggc
gtaaaaccggagctctcgaccacgggcggcacctcggatgcgcgtttcgtcaaggcgcat
tgcccggtggtggagttcggtctggtcggtcaatccatgcaccaagtcgatgaacatgtg
cgggtcgagcatatccaccagcttaaatccatctacgcgcgcgtgctgcgggattatttc
acgtga
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