Sulfitobacter dubius: R1T39_10845
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Entry
R1T39_10845 CDS
T09506
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sdub
Sulfitobacter dubius
Brite
KEGG Orthology (KO) [BR:
sdub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdub03400
]
R1T39_10845 (addA)
Enzymes [BR:
sdub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R1T39_10845 (addA)
DNA repair and recombination proteins [BR:
sdub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
R1T39_10845 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
WOI28192
LinkDB
All DBs
Position
complement(2174176..2177547)
Genome browser
AA seq
1123 aa
AA seq
DB search
MMRDFDDATRAQIEAARPDASTWLTANAGSGKTRVLTDRVARLLLDDVEPQHILCLTYTK
AAASEMQNRLFKRLGEWAMLKDETLRSALADLGVQGELTPEQLRNARTLFARAIETPGGL
KIQTIHSFCAALLRRFPLEAQVSPQFTEIEDRAADLLRAEIVDEMAEGKDAPLVADIARH
YTGEDFASLTRSIVGQRDAFTEARSWADILALFDQPEDLTEESIAGSVFLGSEAAMMAEI
IPHLLAKGGNDGKAGAALQEIDRYDLSALPQLENILLTGSGAKAPFTAKIGSFPTKPTQK
VIAEQMPQLEQLMQRVEDAREARLALKAARKSYVLHRFAARFLDRYADEKQKRGWLDFDD
LILKARALLTDKAVAAWVLFRIDGGIDHILVDEAQDTSPRQWDVIERLTDEFYSGAGARN
EVDRTLFVVGDKKQSIYSFQGADPEELDRKGATFEQKIGEAGQFFQRRSLAYSFRSSSAI
LQAVDGVFDPAIQTGFTNDGHMAFKDRLPGRVDLWPFIEKAGPDEEGDWTDPVDRRSARH
HTVQLAERIARRIKELTTEEHYLPDDSKGGLARRRIQPGDFLILVQRRSALFSEIIRACK
AAELPIAGADRLKVGAELAVRDLAAILSFLATPDDDLSLATALKSPLFGWSEQQLFTLAH
YRKEDHLWQALRGQTETHAATLAVLRDLRGQVDYLRPYDLIERILTRHDGRRKLLARLGP
EAEDGINAMLSQALSYERGTVPSLTGFLQWMQTDDLEIKRQIDSASNQIRVMTVHGAKGL
EAPIVILPDTGRRDVTIKDEIITVDGTPVWKAPADDMPEPMRARLDEMKEAALQERLRLF
YVAMTRAEKWLIVAAAGELSKDESSWYQITAAALARLRAEPLGDDGTLRYQQGDWDALDI
IETPEKIVTTPALDPIFARSAPSPHGEDKTLSPSDLGGAKALAGEAGFDMDTALSYGTLV
HELLEHLPLMTPEARQVFLDRLARNLPTEMIARAQDEAEAVLRTPALAPLFADTTLAEVP
VTGSLGKQRLHGTIDRLVIAEDHILAVDFKTNRVVPGTAEACPDGLLRQIGAYAHMLRQI
YPDRRIETAILWTAAPALMVLPNDIVTNALRALPYLDATAPRS
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcgattttgacgacgccacccgcgcccagatcgaagcggcgcgacccgatgcc
tccacttggctcaccgccaacgcaggctctggcaagacccgcgtgctgaccgaccgcgtg
gcgcggctgttgctggatgatgtcgaaccgcagcacatcctttgtctgacctacaccaag
gctgccgcctctgagatgcaaaaccgtctgtttaaacgcttgggcgaatgggcgatgctg
aaagatgagaccctgcgcagcgctttggccgatcttggcgtgcagggtgaattgacgccc
gagcaactacgcaatgcccgcacccttttcgcccgcgcgattgagacaccgggcgggctg
aaaatccaaaccatccactccttctgcgcggcccttttgcgccgcttcccgctggaggcg
caggtcagcccgcaattcaccgagatcgaagaccgcgccgccgatctgctgcgcgccgag
atcgttgatgagatggccgaaggcaaagatgcccctctcgtggccgacatcgcgcggcat
tacacaggcgaggatttcgcgagcctgacccgtagcatcgtcggccagcgcgacgctttt
accgaagcgcggtcatgggccgatatcctagcgctttttgatcaacccgaagatctgacc
gaagagagcatcgccggttccgtcttcctcggcagcgaagcggcgatgatggccgagatc
attccccatctgctcgccaaaggcggcaatgacggcaaagcgggggcggccctgcaagag
attgaccgctatgacctctccgccctgccccagttggaaaatatccttctgaccggcagc
ggtgccaaagcaccttttaccgccaagatcggcagctttccgaccaagccgacgcagaag
gtcatcgccgagcagatgccgcagcttgagcaattgatgcagcgcgttgaagatgcccgc
gaagctcggctggccctgaaagcggcgcggaagtcctatgtgctgcaccggttcgcagcc
cggttccttgaccgttacgcggatgaaaagcaaaagcgcggctggctcgactttgacgat
ctgatcctcaaagcccgcgctttgttgaccgacaaggcggtggcggcatgggtgctgttc
cgcatcgacggcggcatcgaccatatccttgtcgacgaagcacaggacacatcgccgcgc
cagtgggacgtgatcgaacggctgacggatgagttttactcgggcgctggcgcacgtaac
gaggtggatcggacgcttttcgtcgtgggcgacaagaagcaatcgatctactctttccaa
ggggccgaccccgaagaactggaccgcaaaggcgcaacctttgagcagaaaatcggcgaa
gcggggcagttctttcagcgccgcagcctcgcctattccttccgctcttcctcggcgatt
ttgcaggcagtcgatggggttttcgaccccgcgatccagaccggctttaccaatgacggc
catatggccttcaaggatcgcctgcccggccgcgtcgatctttggcctttcatcgaaaag
gcgggcccagacgaggaaggcgattggaccgatcccgtcgaccgacgcagcgcgcggcat
cacaccgtgcaactggccgaacgcatcgcgcggcgcatcaaggaactgacgaccgaggaa
cattaccttcccgacgatagcaagggcggtttggcgcggcggcgtatccaaccgggggat
ttcctaatcctcgtgcagcgccgctcggccctgttttccgagattatccgcgcttgcaaa
gcggcggaactgcccattgcgggggccgacaggctcaaggtcggggctgaactggcggtg
cgcgatctggcggcgatcctgtctttccttgccacgccggacgatgacctatccctcgcc
accgcgctgaaatcgccgcttttcggctggtcagaacaacagctttttaccctcgcccac
taccgcaaggaggatcacctctggcaggcgctgcgtggccagaccgagacccacgccgcc
accctcgccgtactgcgggacctgcgcgggcaggttgattacctgcgcccttacgacctg
atcgaacgcattctcacccgccatgatggccgccgcaagctgctcgcgcggctggggcca
gaggccgaggatgggatcaacgcgatgctaagccaagcgctctcctacgagcgcggcacg
gtgccaagcctgaccggattcctgcaatggatgcagaccgatgatctggagattaaacgc
cagatcgacagtgcgtcgaaccagatccgcgtgatgacggtgcatggggcaaagggtctg
gaagcgccgatcgtgatcctgcccgataccgggcggcgcgatgtgacgatcaaggatgag
atcatcaccgtcgacggcacgcccgtctggaaagccccggcagatgacatgcccgaaccc
atgcgcgcgcggctcgatgagatgaaagaggccgcgttgcaagagcggcttcggcttttc
tatgtggccatgacgcgggccgagaaatggttgatcgtggcggcggcgggggaactgtcg
aaagatgaatcttcctggtatcagatcaccgctgctgctttggcccggctccgggccgag
cctttgggcgatgatggtactctgcgctatcaacagggcgattgggatgcgctcgacatc
attgagacgcctgagaaaattgtcacaacgcctgcgttagaccctattttcgcccgctca
gccccctctcctcatggggaggataaaacgctctctccctctgatcttggcggtgccaag
gcgctggcgggcgaggcgggctttgatatggataccgcgctaagctatggtactttagtc
catgaattgctggagcacctcccgcttatgacaccggaagcgcggcaggtattcttggac
cgtttggcccgaaatctccccaccgaaatgatcgcacgcgcgcaggacgaagcggaagcg
gtgttgcgcacccctgccctcgccccgctgtttgccgacacgacgcttgccgaagtacca
gtgaccggaagcctcggaaaacagcgtctacacggcacgatcgaccgtttggtgatcgcc
gaagatcacatccttgccgtcgatttcaaaaccaaccgcgtggttcccggcacggctgag
gcttgcccggatgggctgttgcgtcagatcggagcctatgcccatatgttgcgtcagatt
taccctgatcggcggattgagacggccattctatggacagcagcgcccgcgcttatggtg
ttacccaacgatatcgtgacaaatgcgctgcgtgccctgccatatcttgacgccaccgcc
ccgcgttcatag
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