Sulfitobacter dubius: R1T39_11280
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Entry
R1T39_11280 CDS
T09506
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sdub
Sulfitobacter dubius
Brite
KEGG Orthology (KO) [BR:
sdub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdub03016
]
R1T39_11280
Enzymes [BR:
sdub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
R1T39_11280
Transfer RNA biogenesis [BR:
sdub03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
R1T39_11280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
DUF7611
Motif
Other DBs
NCBI-ProteinID:
WOI28273
LinkDB
All DBs
Position
complement(2268112..2268726)
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AA seq
204 aa
AA seq
DB search
MTNFLYQNDLPDDLDLGPMVAIDCETMGLHPHRDRLCVVQLSGGDGHAHLVQVAKGQTEA
PNLCALLENPHVLKLFHYGRFDIAAMLNTFGATAAPVYCTKIASRLVRTYTDRHGLAKLC
QELLSVDISKQQQSSDWGAEKLTQAQIDYAASDVLYLHRLRDELNKRLIREGRMDMAQAC
FDFLPVRAKLDLEGWPDTDIFAHT
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatttcctctatcagaatgacctgccggatgacctcgaccttgggccgatggtc
gccattgattgcgagacgatgggcctccacccgcaccgcgaccgactttgcgttgtgcag
ctgtcgggcggcgatggtcacgcacatctggtgcaggtcgccaagggccagaccgaggcg
ccgaacctctgcgcactgctggaaaatccccatgtgctgaagctgtttcactacggtcgc
ttcgacatcgccgcgatgctcaacacctttggtgccaccgccgcaccagtctattgcacc
aagatcgccagccgtttggtgcgcacttacacagaccggcacggacttgccaaactttgc
caagaactgctgagtgtcgacatctcgaaacagcagcaatccagcgattggggggccgaa
aaactgacccaagcgcagatcgactatgccgcgtcggatgtgctgtatctgcaccgtctg
cgcgatgaacttaacaaacgcctgatacgcgaaggtcggatggacatggcgcaggcctgt
ttcgatttcctgccggtgcgcgccaagctggatctggagggatggccggacacggacatc
ttcgcacacacatga
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