KEGG   Sulfitobacter dubius: R1T39_11390
Entry
R1T39_11390       CDS       T09506                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
sdub  Sulfitobacter dubius
Pathway
sdub00300  Lysine biosynthesis
sdub00470  D-Amino acid metabolism
sdub01100  Metabolic pathways
sdub01110  Biosynthesis of secondary metabolites
sdub01120  Microbial metabolism in diverse environments
sdub01230  Biosynthesis of amino acids
Module
sdub_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sdub00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    R1T39_11390 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    R1T39_11390 (dapF)
Enzymes [BR:sdub01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     R1T39_11390 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: WOI30708
LinkDB
Position
complement(2290044..2290877)
AA seq 277 aa
MYSDQTPGLPFMKMHGLGNDFVVFDARAEAIDVTPAMAQAIGHRQFGVGFDQLAVITQGA
GDAHLTFYNSDGSLSAACGNATRCIARYLMDETGRDSLHLTTARGDLAAKDAGGGLTSVN
MGHPQLNWDEVPLAREMDTLHLPIDGDPVATGMGNPHCTFFVDDAEAVDLSDLGPRAEHD
PLYPERTNVQVAQIVGPDHIRMRVWERGVGVTLASGSSSCATAVAAARRGLTGRAVRIDL
DGGTLHIDWREDGVWMTGPTTHVFSGTFTPEFLESLT
NT seq 834 nt   +upstreamnt  +downstreamnt
atgtacagcgatcagacccccggattgcccttcatgaaaatgcatgggctaggcaatgac
ttcgtcgtgtttgatgcacgcgcggaggcaatcgacgtgaccccggcgatggcgcaggcc
atcgggcaccggcaatttggcgtgggattcgatcagcttgcggtgattacacaaggggcg
ggcgacgcgcatctgaccttttacaacagcgacggctcgctctccgccgcctgcggcaat
gccacccgctgcatcgcgcgctatctgatggacgagacaggccgcgattcgctgcatttg
accaccgcgcggggcgatctggcggcgaaggacgccgggggcggcttgacctccgtcaac
atgggccacccgcagttgaattgggacgaggtgccactggcgcgcgaaatggacacgctg
cacctgccgattgacggcgaccccgtcgccaccggcatgggcaacccgcattgcaccttt
tttgtcgatgatgccgaggcggtggatctctccgatctcggcccccgcgccgagcatgac
ccgctttatcctgagcgcaccaacgtccaagtggcgcaaatcgtcgggccggaccatatc
cgcatgcgcgtttgggagcgcggcgtgggcgtgacgctggcctcgggctcgtcctcctgc
gccacagccgtcgccgccgcccgtcggggcctcacgggccgcgccgtgcgcatcgacctc
gacggcggcacactgcacatcgactggcgcgaggatggcgtctggatgacggggccgacc
acccatgtcttttccggcaccttcacccccgagtttctggagagcctgacatga

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