Sulfitobacter dubius: R1T39_11560
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Entry
R1T39_11560 CDS
T09506
Symbol
dxs
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
sdub
Sulfitobacter dubius
Pathway
sdub00730
Thiamine metabolism
sdub00900
Terpenoid backbone biosynthesis
sdub01100
Metabolic pathways
sdub01110
Biosynthesis of secondary metabolites
Module
sdub_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
sdub00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
R1T39_11560 (dxs)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
R1T39_11560 (dxs)
Enzymes [BR:
sdub01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
R1T39_11560 (dxs)
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Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_N
E1_dh
Motif
Other DBs
NCBI-ProteinID:
WOI28324
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Position
complement(2328562..2330490)
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AA seq
642 aa
AA seq
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MSDKPATPLLDQVTRPADLKRLSDAELTQVARELRAETISAVSETGGHLGAGLGVVELTV
ALHAVFDTPRDKIIWDVSHQCYPHKILTERRDRIRSLRMKDGLSGFTKRSESPYDPFGAA
HSSTSISAALGFAVGRDLGGVIPEGLGDAIAVIGDGAMSAGMAYEALNNAGDLKKRLIVI
LNDNEMSIAPPVGAMSSYLSRLYAEAPFQDFKAAAKGAVSLLPEPFREGAKRAKDMLKGM
AVGGTLFENLGFSYLGPINGHDMDQLLPVLRTVHQRATGPSLIHIQTQKGKGYGPAEAAR
DRGHATAKFNVVTGEQKKAPSNAPSYTRVFADSLLAEAAEDDKICAVTAAMPDGTGLDLF
AERYPSRCFDVGIAEQHGVTFCAGLAAAGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVR
FAIDRAGLVGADGPTHAGAFDVAFLANLPGFVVMAAADEAELRHMVATAAAHDEGPIAFR
YPRGEGRGVEMPERGTPLEIGKGRIISEGSKVALLSFGTRLEEVEKAAEQLSAKGITPTI
ADARFAKPLDRDMILKLAAEHEALITIEEGAVGGFGSHVAQLLADEAVFDKGLKFRSMVL
PDTFIDQASPADMYAVAGMNAEQITAKVLDVLGVAELGAQRA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaaacccgccacccccctgcttgatcaggtgacccgccctgcggacctgaaa
cgcctgtccgacgccgaactgacccaagtcgcgcgtgaactgcgggccgagacgatctcg
gccgtgtcggaaaccggcggacacttgggcgcggggcttggtgtggtggagctgaccgtg
gcgctgcatgcggtctttgacaccccgcgcgacaagatcatctgggatgtcagccaccag
tgctacccgcataaaatccttactgaacgccgcgaccgtattcgcagcctgcggatgaag
gacgggctgtcaggcttcaccaaacgcagcgaatccccctacgaccccttcggcgcggcg
catagttcgacctccatctcggcagcgctcggctttgccgtcggccgcgatctgggcggt
gtgatccccgaaggactgggcgacgcgattgccgtgatcggtgacggcgcgatgagcgcg
ggcatggcctatgaggcgcttaacaacgcgggcgatctgaaaaaacgcctgatcgtaatc
ctcaacgacaatgagatgtccatcgccccgcccgtgggcgcgatgtcgagctacctcagc
cgcctctacgccgaagcgccgtttcaagatttcaaggccgccgccaagggcgcagtgagc
ctgctgcccgaaccgttccgcgaaggcgcgaaacgcgcaaaggatatgctgaagggcatg
gcggtcggcggcaccctgttcgagaacctcggcttttcctacctcggcccgatcaacggg
cacgacatggaccagttgctgcccgtgctgcgcaccgttcatcaacgcgcgacggggccg
agcctgatccacatccagacgcaaaagggcaaaggctatggccctgccgaagccgcgcgg
gatcggggccacgccacggccaagttcaacgtggtgacgggcgagcaaaagaaagccccc
tcaaacgcgccgagctatacccgcgttttcgccgacagcctgctggccgaggccgccgag
gacgacaagatctgcgccgtgacagccgccatgcccgacggcaccggccttgatcttttc
gccgaacgctaccccagccgctgcttcgacgtgggcattgccgaacagcatggggtgacc
ttctgcgcagggctggcggcggcggggatgaaacccttctgcgcgatgtattccaccttc
ctgcaacgcggttacgatcaggtcgtgcatgatgtcgcaattcagcgtctgcccgtgcgc
ttcgccatcgaccgcgccggattggtcggcgctgacgggccaacccacgcaggcgcattt
gatgtggctttcctcgccaatctgccgggtttcgtggtgatggccgccgcagacgaggcc
gagttgcgccatatggtcgccaccgcagccgcccatgacgaaggccccatcgccttccgc
tatccgcgcggcgaggggcgcggggtcgagatgccagagcgcggcacgccactggaaatc
ggcaaggggcggatcatttctgagggcagcaaggtcgcgcttttgtcctttggcacgcgg
ctcgaagaagtcgagaaagccgccgaacagcttagcgccaagggcatcacccccaccatc
gccgatgcgcgtttcgccaagccgctggaccgcgatatgatcctgaaactggccgccgag
cacgaagcgctcatcaccatcgaagagggtgccgtaggcggctttggcagccatgtggcg
caactgcttgccgatgaggcggtctttgataaggggcttaagttccgctccatggtgctg
cccgataccttcatcgatcaggccagcccggcggatatgtacgccgtggcggggatgaac
gctgaacagatcactgccaaggtgctcgatgtgctcggcgtcgctgagttaggcgcgcag
cgcgcctaa
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