Sulfitobacter dubius: R1T39_12390
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Entry
R1T39_12390 CDS
T09506
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sdub
Sulfitobacter dubius
Brite
KEGG Orthology (KO) [BR:
sdub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdub03016
]
R1T39_12390 (truB)
Enzymes [BR:
sdub01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
R1T39_12390 (truB)
Transfer RNA biogenesis [BR:
sdub03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
R1T39_12390 (truB)
Prokaryotic type
R1T39_12390 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WOI28480
LinkDB
All DBs
Position
complement(2488687..2489613)
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AA seq
308 aa
AA seq
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MARKRKGRDISGWLVVDKPAGPTSTAVVNKVRWALEAKKAGHAGTLDPEATGVLAIALGE
ATKTVPYITDALKAYEFTVRLGIATNTDDAEGEVIGTSDLRPDDAAIKDALSNFIGDIQQ
VPPQFSAVKIDGQRAYKRARDGEEMDIAARPLWVESLLLLDRPDADHVTLEMVCGKGGYV
RSIARDLGQKLGCLGNVRELRRTWSGPFEAANALTLAQIDEIARTPELDTHLLPLAEGLV
DLPEVKATPEGATRLRNGNPGMVIAHDVEYGDECWASLDGQPVAVGRFKAGELHPSRVFN
LSTDTNEG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaaacgcaaaggtcgcgacatttccggttggctggtggtggacaaacccgcc
gggccgacatcgaccgccgtggtcaacaaggttcgctgggcgcttgaagccaagaaggcg
ggccacgcgggcacgcttgatcccgaagccaccggggttctggccatcgccttgggcgaa
gcgaccaagaccgtgccctatatcaccgacgcgctcaaagcctatgagttcaccgtgcgt
ctggggattgccaccaacaccgacgacgccgaaggcgaagtcatcggcacctccgatctg
cgccccgacgatgcggccatcaaggatgcgctaagcaattttatcggcgatatccaacag
gtaccgccgcagttctctgccgtgaagatcgacggccagcgcgcctataaacgcgcccgc
gatggcgaagagatggacatcgccgcccgcccgctttgggtggaaagcctgctgctgctc
gaccggcccgacgccgatcacgtcacacttgagatggtctgcggcaagggcggctatgtc
cgctccatcgcgcgcgacttggggcagaagcttggttgcctcggcaacgtccgcgagctg
cgccgcacgtggtccggcccgtttgaggccgcgaacgcgctgacgctggcacagatcgac
gagatcgcacgaacgccagaactcgacacgcatctgctgccgctggccgaggggctggtc
gacctgcccgaggtcaaagccacgcccgaaggtgccacccgtctgcgcaatggcaacccc
ggcatggtcatcgcccatgacgtggaatatggcgacgaatgctgggcttcgctggatggc
cagcccgtggccgtgggccgcttcaaagcgggcgaattgcaccccagccgggtgtttaac
ctctctacggacacgaacgagggctga
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