Sulfitobacter dubius: R1T39_12545
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Entry
R1T39_12545 CDS
T09506
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
sdub
Sulfitobacter dubius
Pathway
sdub00630
Glyoxylate and dicarboxylate metabolism
sdub00680
Methane metabolism
sdub01100
Metabolic pathways
sdub01120
Microbial metabolism in diverse environments
sdub01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sdub00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
R1T39_12545 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
R1T39_12545 (fdhF)
Enzymes [BR:
sdub01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
R1T39_12545 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer4_9
Fer4_8
Fer4
Fer4_21
Fer2
Fer4_6
Fer4_10
Fer4_17
Fer4_16
Fer4_4
Fer4_22
Fer4_2
Fer4_18
DUF4350
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
WOI28511
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All DBs
Position
2521233..2523998
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AA seq
921 aa
AA seq
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MAERITFTLDGQTVEAEAGMTIWEVANGRGLKIPHLCHKPAPGYRPDGNCRACMVEIEGE
RVLAASCIREPAEGMVVTTNNARAENARKMVMELLLADQPAQEVAHDKSSHMREMASLSG
VESSRFPKLERDRIPLLDDSHVAMRVNLDACIQCNLCVRACREVQVNDVIGMAGRGHDAY
PVFDIDDPMGASTCVACGECVQACPTGALMPATVVDEAQVGDSADYDSEVESICPFCGVG
CQISLKVKDNKVKYVEGINGPANEGRLCVKGRFGFDYIHHDHRLTKPLIRREDAPAKGLN
VDPGNWGEVFREATWDEALDFAAQGLKGRGREVAGFGSAKCTNEEAYLFQKMIRQGFGHN
NVDHCTRLCHASSVAALMENVGSGAVTATFNEIENADVAIVIGANPVENHPVAATYFKQF
TKRGGRLIVMDPRGVGLRRFSSHMLQFRPGTDVAMLNAIMHVIVEEGLYDEQYIAAYTEN
WEAEKAHLKDFPPEAMAAVCGIKAEVLRDVARTFAGAKAGMIFWGMGVSQHIHGTDNSRC
LISLALMTGHVGRPGTGLHPLRGQNNVQGASDAGLIPMFLPDYQPVGDDGVRSAFTEVWG
SDDFSAEKGLTVTEIMDAVHDGEIKAMYVLGENPAMSDPDVDHARAALAKLDHLVVQDIF
LTETANYADVILPASAFAEKTGTVTNTNRQVQMGRPAVTPPGEAREDWWIEVELAKRLGL
GWSYESPADIFAEMKLNMKSFDNITWDRLARENAVTYPSLSESDPGQAIVFSEGFPRPEG
RAKFTPAAIVAPDDAPDDAYPMILTTGRQLEHWHTGSMTRRSKVLDGLEPEANCSLHPST
LRRLGVAPGEHVRLSTKRGSIEIMAREDRAVSPDMVFLPFAYVEAAANILTNPAVDPYGK
IPEFKFSAVRVEAAKGTVAAE
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaggatcacattcacgcttgatgggcaaaccgttgaggcagaggctggcatg
accatttgggaagtggccaatggtcggggtcttaaaatcccgcatctgtgccacaaaccc
gcccccggctaccgccccgacggcaactgccgcgcctgtatggtcgagatcgaaggagag
cgggtgctggcggcctcttgcatccgcgagcctgccgaggggatggtcgtcaccaccaac
aatgcgcgcgccgagaatgcccgcaaaatggtgatggagctgctgctggccgaccaaccc
gcgcaggaggtggcgcatgacaaatcgagccatatgcgtgaaatggcgtcgctgagcggg
gtagagagcagccgtttccccaagctggagcgggaccgcattccgttgttggacgacagc
catgtggcaatgcgtgtgaaccttgatgcttgcatccagtgcaacctctgcgtccgcgct
tgccgcgaggtgcaggtcaacgacgtgattggcatggccgggcgtgggcatgatgcgtat
ccggtttttgatatcgacgatcctatgggtgcatcgacctgtgtggcctgcggcgaatgc
gtgcaggcctgcccgacgggggcgcttatgcctgccacggtggtggatgaggcgcaggtc
ggtgacagtgcagattacgacagcgaagtcgaaagcatctgccccttctgcggcgtgggt
tgccagatttcgctgaaggtcaaggacaacaaggtcaaatatgttgaaggcatcaacggc
ccggcgaacgaagggcggctctgcgtcaaggggcgctttggctttgactatatccaccac
gatcaccgcctgaccaaaccgctgatccgccgcgaggacgcgcccgccaaagggctgaat
gtcgatccgggcaattggggcgaggtgttccgcgaggccacatgggacgaggcgctggat
ttcgcagcacagggcctcaaggggcgcgggcgcgaggtggcgggctttggcagtgcgaaa
tgcactaatgaagaagcctatctgtttcaaaagatgatccgtcagggctttggccataac
aacgtcgatcactgcacgcggctctgccatgcctcatccgtggcggcgctgatggagaac
gtcggctcaggcgccgtcaccgcgaccttcaacgagatcgagaacgccgacgtggccatc
gtcatcggcgccaacccggtggagaaccacccagtcgctgcgacctatttcaaacagttc
accaagcgcggcggcaggctgatcgtgatggacccgcgcggtgtggggctccgccgtttc
tccagccatatgctgcaattccgccccggcaccgacgtggcgatgctcaacgcgatcatg
catgtgatcgtggaagaaggtctctacgacgagcaatatatcgcggcctataccgagaat
tgggaggctgagaaggcgcatctgaaggacttcccgcccgaggccatggccgccgtctgc
ggcatcaaggccgaggtgctgcgcgatgtggcgcggacctttgctggggccaaggcgggt
atgatcttctggggcatgggggtcagccagcacatccacggcaccgacaattcgcgctgc
ctaatttcgctggcactgatgaccggccatgtcggccgccccggcaccggtctgcacccc
ttgcgcgggcagaacaacgtgcaaggcgcctcggacgctggcctcattccgatgttcctg
cccgactaccagccagtcggcgacgacggcgtgcgctcggctttcaccgaggtctggggc
tcagatgattttagcgccgagaaggggctgacggtgactgagatcatggacgcggtgcac
gacggcgagatcaaggcgatgtatgtgctgggcgagaacccggcgatgtcggacccggat
gtcgaccacgcccgcgcggcccttgccaagcttgatcatctggtggtgcaggacattttc
ctgaccgaaacggcgaattatgccgatgtgatcctccccgccagcgcctttgccgagaag
actggcacggtgactaacaccaaccggcaggtccagatgggccgcccggcggtgacgccc
ccgggggaggcgcgcgaggattggtggatcgaggtcgaactagcgaagcggctgggcctt
ggctggtcctacgaaagcccggcggatatctttgccgagatgaagctgaacatgaagtcc
tttgacaacatcacatgggaccgtttggcgcgtgagaatgctgtgacctacccgtcgctc
agcgagagcgatccggggcaggcgattgtctttagcgagggtttcccgcgtcccgaaggc
cgcgccaaattcacccccgccgcgatcgttgcacccgatgatgcgccagatgacgcctat
ccgatgatactgaccaccgggcggcagttggaacattggcataccgggtcgatgacgcgg
cggtccaaggtgctcgacgggctggaaccggaggcgaattgctcgttgcacccgtcgacc
ctgcgtcgccttggcgtggcaccgggggagcatgtgcggctttcgaccaaacgcggcagt
atcgagatcatggcccgcgaggatcgggcggtatcacccgacatggttttcctgcccttc
gcctatgtcgaagcggcggcgaatatcctgacaaatccagcggttgacccctacggcaag
atcccggagtttaagttctctgccgtcagggtggaggcggcaaaaggcaccgtcgccgcc
gagtaa
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