KEGG   Sulfitobacter dubius: R1T39_13135
Entry
R1T39_13135       CDS       T09506                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
sdub  Sulfitobacter dubius
Pathway
sdub03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sdub00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    R1T39_13135 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdub03400]
    R1T39_13135 (uvrB)
DNA repair and recombination proteins [BR:sdub03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     R1T39_13135 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      R1T39_13135 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 DUF87 AAA_16 Kinesin AAA eIF3_p135
Other DBs
NCBI-ProteinID: WOI28617
LinkDB
Position
complement(2645945..2648149)
AA seq 734 aa
MPYAHSDKSEGMPMLANPAPDVRSRPKLEGGHKFKLVTEFAPAGDQPTAIKELTEGVNSG
ERDQVLLGATGTGKTFTMAKVIEETQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVS
YYDYYQPEAYVARSDTFIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSV
ETYGAMTQDLKAGGMYDQRKVIADLVAQQYKRNDAAFQRGSFRVRGDSLEIFPAHLDDRA
WRLSFFGEELESITEFDPLTGEKTDTFDQIRVYANSHYVTPKPTMSQAIIGIKKELRTRL
DQLVADGKLLEAQRLEQRTNFDIEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPD
NAIVFADESHVSVPQIGGMYKGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVF
VSATPAAWEIEQTGGVFTEQIIRPTGLIDPQIEIRPIEMQVDDLLDEVRKVAADGYRTLC
TVLTKRMAEDLTEYMHEQGIRVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLD
IPECGLVAILDADKEGFLRSETSLIQTIGRAARNAEGRVIMYADRITGSMERAMGETDRR
RAKQLAYNEEHGITPATVKKNVDDILAGLYKGDVDMNRVTAKVDNPLAGGNLQTVLDGLR
VDMRKAAENLEFEEAARLRDEVKRLEAVDLAVADDPMARQQAVDRAVDAAQKASGRSTSG
RGGMRGGNVKRRKR
NT seq 2205 nt   +upstreamnt  +downstreamnt
atgccctatgcccattccgacaaatccgaggggatgccgatgctggcaaaccccgcgcca
gacgtgcgcagccgccccaagctggagggcggccataagttcaagctggtgaccgagttc
gctccggcgggcgaccagcccaccgcgatcaaggaattgaccgaaggggtgaactcgggc
gagcgcgatcaggtgcttctgggcgcgaccggcacgggcaagactttcaccatggccaag
gtgatcgaggaaacgcagcgcccagcgatcatccttgcgcccaacaagacgctggcggcg
cagctttacggcgaattcaagggcttcttccccgacaacgcggtggaatatttcgtctca
tactacgactactaccagcccgaagcctatgtcgcgcggtccgataccttcatcgagaag
gaaagccagatcaacgaacagatcgaccggatgcgccactctgccacccgcgcgctgttg
gagcgtgacgatgtgatcatcgtggcctcggtttcctgcatctacggcatcggtagcgtc
gagacctacggcgcgatgacgcaagacttgaaagcgggcggcatgtacgaccagcgcaag
gtgatcgccgatctggtcgcccagcagtacaagcgcaacgacgcggcattccagcgcggc
tctttccgtgtgcgcggcgatagccttgaaatcttccccgcccaccttgatgaccgcgca
tggcggctcagcttctttggcgaggaattggaaagcatcaccgagttcgacccgctgacg
ggtgagaagacggacacgttcgaccagatccgcgtctacgccaacagccactacgtcacg
ccgaaaccgacgatgtcccaagccatcatcggcattaagaaagagttgcgcacccggctc
gatcaactggtcgccgatggcaaactgctggaagcgcagcggctggaacagcgcaccaat
ttcgacattgagatgctagaggccaccggcgtctgcaacgggatcgagaactattcgcgc
tatcttacgggccgcgctccgggtgagccgccccccaccctcttcgaattcatccccgat
aacgccatcgtctttgccgatgagagccacgtctcggtcccgcagatcggcggcatgtac
aagggcgactatcggcgcaaattcacgctggccgagcacggtttccgcctgccgtcctgc
atggacaaccgaccccttaagttcgaggaatgggacgccatgcgcccgcagtcggtcttt
gtctcggccacgccagcggcgtgggagatcgagcaaacaggcggcgtattcaccgaacaa
atcattcgaccgacaggtctgatcgacccgcaaattgagatccgcccgattgaaatgcag
gtcgacgatctgcttgatgaggtgcgcaaagtcgccgccgatggctaccggaccctgtgt
accgtgctaaccaagcggatggccgaagacctgaccgaatatatgcacgaacagggcatc
cgcgtgcgctacatgcacagtgacatcgacacgatcgagcggatcgaaattctgcgcgac
ttgcgtttgggcgcctttgacgtgctgatcgggatcaacctattgcgggaggggctggac
atccccgaatgtgggctggtggccattctggacgcggacaaggagggcttcctgcgctct
gaaacctcgctcatccagaccattggccgggccgcgcgaaacgccgaaggccgcgtaatc
atgtatgccgaccgcatcaccggcagtatggaacgggcgatgggcgaaaccgaccgccgc
cgcgccaagcagctggcctataacgaagaacacggcatcacgcccgccacggtcaaaaag
aacgtcgatgacattctggccggcctttacaaaggtgatgtcgatatgaaccgggtcact
gccaaggtcgacaaccccctagcgggcggcaaccttcaaactgtgcttgatgggctgagg
gtcgacatgcgcaaagctgccgagaaccttgagttcgaagaagccgcaaggctgcgcgat
gaggtcaagcggctggaggcagtcgatctggctgtggccgacgatccgatggcccgccaa
caagcggtggaccgcgctgtcgatgccgctcaaaaagcgtcggggcgcagcacctctggc
cgaggcggcatgcgtggcggcaacgtgaaacggcgcaaacggtaa

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