Sulfitobacter dubius: R1T39_13375
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Entry
R1T39_13375 CDS
T09506
Symbol
edd
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
sdub
Sulfitobacter dubius
Pathway
sdub00030
Pentose phosphate pathway
sdub01100
Metabolic pathways
sdub01120
Microbial metabolism in diverse environments
sdub01200
Carbon metabolism
Module
sdub_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
sdub00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
R1T39_13375 (edd)
Enzymes [BR:
sdub01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
R1T39_13375 (edd)
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GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
DUF6400
Motif
Other DBs
NCBI-ProteinID:
WOI28662
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All DBs
Position
2701082..2702890
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AA seq
602 aa
AA seq
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MTLHSTIDRVTDRIIARSEATRRPYLDRMEAARAKGPARAHLSCSGQAHAYAASGEDKDR
LATTSAGNLGIVTTYNDMLSAHQPFERYPELIRDAVRAAGGTAQVAGGVPAMCDGVTQGE
AGMELSLFSRDVIALAASVGLSHNTFDAAVFLGVCDKIVPGLVIAAQAFGHLPAVFLPAG
PMESGLSNDEKAKVRQQFAAGEVGRDALMAAEMAAYHGPGTCTFYGTANTNQMLMEFMGL
HLPGASFVPPNGLLRDALTQEGAKRALALSALGNDYTPVASVLDEKAFVNGIVGLNATGG
STNLLIHLIAMARAGGIILDWEDFSDISDITPLLARVYPNGLADVNHFHAAGGLGYMIGE
LLNSGHLHPDTHTVAGQGLEHYTSEPKLKVDGLVWEKGAGESLNEKILRPASDPFQPTGG
LRRMAGSLGTACMKVSAVAPEHHIIEAPARVFADQNEVKAAFKAGELTDDVIVVVRFQGP
KANGMPELHSLTPLLSILQGRGQKVALITDGRMSGASGKVPAAIHVSPEAVDGGPIARVQ
DGDMLRVDAVAGTLDVLAEGFDDRPNVTADLSAYHAGTGRELFAMFRDTVGSATTGATIF
GG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgcattccacgattgaccgcgtcaccgaccgtatcatcgcccgcagcgaggcg
acccggcggccctatctggatcggatggaagccgcccgtgccaaagggcctgcgcgggca
catttgtcgtgcagcgggcaagcccatgcctatgccgcctccggcgaagacaaggaccgg
ctggcgaccaccagcgcaggcaacctcggcattgtgacgacctataacgacatgctctcg
gcgcatcagccgtttgagcgttaccccgaactgatccgcgacgcggtacgtgcagcaggc
ggcactgcgcaggtcgcgggcggtgtcccggcgatgtgtgacggggtgacccaaggggag
gcggggatggagctgtcgctgttttcgcgcgatgtgatcgccttggcggcgtcggtggga
ctcagccacaacacttttgacgcggcggttttccttggggtctgcgacaagattgtgccg
gggctggtcattgcggcgcaggcgttcgggcatctgcctgccgtcttcctgcctgccggg
ccgatggaaagcgggctgtcgaatgatgaaaaagccaaggtgcgccagcagttcgccgca
ggcgaggtcgggcgcgacgcgctgatggccgccgagatggccgcctatcacgggccgggc
acctgcacattctacggcaccgccaacaccaaccagatgttgatggagttcatgggtctg
cacctgccgggcgccagtttcgtgccgccgaacggattgctgcgcgatgcgctgacccaa
gagggcgcgaaaagggcgctggcgctgagcgctctgggcaatgattacacgcccgtcgct
tcggttctggatgaaaaggcctttgtgaacggcatcgtcgggctcaacgccacgggcggg
tcgaccaatctgctgatccaccttatcgccatggcgcgggccggggggatcattctggat
tgggaggatttctcggacatctccgacatcacgccgctgctggcgcgggtctatcccaac
ggtctggccgatgtgaaccattttcacgcggcgggcggccttggctatatgatcggcgaa
ttgctcaactccggccatctgcaccccgacacccataccgtcgccggacaggggttggag
cattacacctccgagccaaagctcaaggtcgatggcttggtatgggaaaagggtgcgggc
gaaagcctgaacgaaaagatcctccgccccgccagcgatcccttccagcccaccggcggg
ctgcgccgcatggccggatcgctcggcaccgcttgcatgaaagtctctgccgtcgcgccc
gaacaccacatcatcgaagccccggcgcgggtctttgcggatcagaacgaggtgaaagcc
gccttcaaagcgggcgagttgaccgacgatgtgatcgtcgtggtccgcttccaagggcct
aaggccaatggcatgcccgagttgcacagcctgacgccgcttctgtcgatccttcaaggg
cgcggtcagaaggtcgcgctgatcaccgatgggcgcatgtcgggggcgtcgggcaaggtg
cccgcagcgatccacgtcagccccgaagcggtcgatggcggccccatagcgcgggtgcag
gatggcgatatgctgcgggttgacgcagttgcagggacgcttgacgtgctggccgaaggg
ttcgatgaccgtcccaacgtcaccgctgacctttctgcttaccatgccgggacggggcgc
gagttgttcgctatgttccgcgacacagtcggttctgctaccaccggcgcaaccattttt
ggaggctga
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