Sulfitobacter dubius: R1T39_13540
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Entry
R1T39_13540 CDS
T09506
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
sdub
Sulfitobacter dubius
Pathway
sdub00071
Fatty acid degradation
sdub00362
Benzoate degradation
sdub00650
Butanoate metabolism
sdub01100
Metabolic pathways
sdub01120
Microbial metabolism in diverse environments
sdub01200
Carbon metabolism
sdub01212
Fatty acid metabolism
Module
sdub_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sdub00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
R1T39_13540
09103 Lipid metabolism
00071 Fatty acid degradation
R1T39_13540
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
R1T39_13540
Enzymes [BR:
sdub01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
R1T39_13540
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
F420_oxidored
NAD_binding_2
Pyr_redox_2
Methyltransf_12
Pyr_redox
RS_preATP-grasp-like
TrkA_N
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
WOI28693
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All DBs
Position
2733932..2736028
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AA seq
698 aa
AA seq
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MTDKIAYSRHDDIVVLRIQNPPVNALSQAVRQGLADGMDRAEAEDGVRAVMIVGEGRAFI
AGADITEFGKPPMEPFLPDLCNRIEASPLLVVASMHGVSLGGGLEVALSAHYRIAQPSAR
VGLPEVHLGLIPGAGGTQRLPRLIGVEPALDAITTGRHIKAPQALEMGIVDRVEEGDPQE
VGLAYVRELLDSGAERRPICEMPAPAPIDWDAAYEVTLKKGRGQISPAEAVRAVQAGVEK
PFEEGMKAERRIFSELMNTDQRQGMIHAFFSERAVSNLPELKGVEPRELKAIGVIGGGTM
GAGIATAALLSGSSVVLIEMKEEAAKAAHERISGNLQGALKRGKIDQAKFDHLTGTALTV
STEYDSLSDVDLVVEAVFEDMDVKKQVFGKLDAVCKPGCVLASNTSYLDVNEIAASTKRP
EDVIGLHFFSPAHVMKLLEVVVADKTAKDVVATGFALGKALGKISVRAGVCDGFIGNRIL
ATYRTAADHMVLDGASPYKIDAALEKFGFAMGPFAVADLAGLDIGWATRKRKAATRHPEE
RVPTYIDRLCEQGHFGQKTGQGYYLYEKGKRGGTPNPEITRLIEEEQKERGITPREFTEA
EIVRRYMCAMVNEAAKVLEEGIAKRPLDIDMTLLFGYGFPRYWGGPMKWADIQGLPNVLA
AIEGFAEKDPWFWKPAPLLVDLVKTNRTFDDLNKEAAK
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaagattgcctattcccgccatgacgacatcgtcgtgctgcgcattcaaaac
ccgcccgtcaacgcgctgagccaagccgtgcggcaggggctggccgacggcatggaccgt
gccgaggctgaagacggcgtgcgcgccgtgatgatcgtgggcgagggccgcgccttcatc
gcgggggctgatatcaccgaattcggcaagccgccgatggagccgttcctgcctgacctg
tgcaaccggatcgaagcctcgccgcttctggtcgtggcgtccatgcatggcgtgagcctt
ggcggcggtctcgaagtggccctctcggcgcattaccgcatcgctcagccttcggcacgt
gtgggtctgccggaagtccaccttggcctgatccccggcgcaggcggcacccagcgtctg
ccgcgccttatcggcgtggaacccgcgctcgacgcgatcaccacgggccgccatattaag
gcaccgcaggcgctggagatgggcatcgtcgaccgcgtggaggagggcgatccgcaggag
gtcggtctcgcctacgtccgcgaattgctcgacagcggtgccgagcgtcgcccgatctgc
gagatgcccgcgcctgcgccgatcgactgggatgccgcctatgaagtgacgctgaagaaa
ggccgcggccagatttcccccgctgaggccgtccgcgccgtgcaggcaggtgtcgagaaa
cccttcgaagagggcatgaaagccgagcgccgtatcttctcggaactgatgaacaccgac
cagcggcagggcatgatccacgccttcttctccgaacgcgcggtcagcaacctgcccgag
ctgaaaggcgtcgagccgcgcgaactgaaagccatcggtgtcatcggtggcggcaccatg
ggggcggggatcgctaccgcagcactgctgtcgggctcctcggtcgtgctgatcgagatg
aaggaagaggccgccaaggccgcgcatgagcgtatctcgggcaaccttcaaggcgcgctg
aaacgtggcaaaatcgatcaggcgaaattcgatcacctgaccggcacggcgctcaccgtc
tccaccgaatacgacagcctctcggacgtcgatctggtggtcgaagcggtcttcgaggac
atggacgtcaaaaagcaggtcttcggcaagctcgacgcggtttgcaagccgggctgcgtg
ctggcctccaacacctcttatctcgacgtgaacgagatcgccgcctccaccaagcgcccc
gaggacgtgatcgggctgcacttcttctcgcccgcgcatgtgatgaaactgcttgaggtc
gtcgtcgccgacaagaccgcgaaagatgttgtcgccacgggctttgcccttggcaaggcg
ctcggcaagatcagcgtgcgcgcgggcgtctgcgatggcttcattggcaaccgcatcctc
gccacctaccgcaccgcggcggaccacatggtgctggacggcgccagcccctacaagatc
gacgcggcacttgagaaattcggctttgccatgggccccttcgccgtggccgatctcgct
gggctcgacattggctgggccacgcgcaagcgcaaggccgcgacgcgccaccccgaggag
cgggtgccgacttatatcgaccgtctgtgcgagcagggacacttcggccagaagaccggc
caaggctactacctttacgagaagggcaaacgcggcggcacgccgaaccctgagatcacc
cgcctgatcgaggaagagcaaaaggaacgcggcatcaccccgcgtgaattcaccgaggcc
gagatcgtgcgccgctacatgtgcgccatggtcaacgaggccgccaaggtgctggaagag
ggcatcgcaaaacgcccgctcgacatcgatatgacgctgcttttcggctatggcttcccg
cgctactggggcggcccgatgaaatgggccgatattcagggcttgcccaatgtcctcgcc
gcgatcgaaggctttgccgaaaaagacccttggttctggaaaccagcgccgctgctggtc
gatctggtcaagaccaaccgcacttttgatgatctgaacaaggaagctgccaaatga
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