KEGG   Sulfitobacter dubius: R1T39_14705
Entry
R1T39_14705       CDS       T09506                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
sdub  Sulfitobacter dubius
Pathway
sdub00300  Lysine biosynthesis
sdub00470  D-Amino acid metabolism
sdub01100  Metabolic pathways
sdub01110  Biosynthesis of secondary metabolites
sdub01120  Microbial metabolism in diverse environments
sdub01230  Biosynthesis of amino acids
Module
sdub_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sdub00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    R1T39_14705 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    R1T39_14705 (lysA)
Enzymes [BR:sdub01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     R1T39_14705 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N DUF6420
Other DBs
NCBI-ProteinID: WOI28920
LinkDB
Position
2975012..2976277
AA seq 421 aa
MDHFLYKDGVLHAEDVSLAEIAAAVGTPVYVYSTATLLRHFHLFDDALSGMDHLVCYAMK
ANSNQAVLRTLAQAGAGMDVVSGGEYRRAKAAGVPGDRIVFSGVGKTREEIELALTGGIR
QFNVESEPEMILLDVVARELGKVAPITIRVNPDVDAKTHAKIATGKSENKFGIPIARARD
VYAMAAKLPGLEIIGIDVHIGSQLTDLAPFEQAYGKVAELTEVLRADGHNIRRLDLGGGL
GIPYERSNTAPPLPTDYGAMVQRTLGHLGCEVEIEPGRLIAGNAGVLVSEVIYFKSGEGR
DFLILDAAMNDLIRPAMYDAWHDIVPLNEPAPGAEPRPVDIVGPVCESGDTFAKQRMMPV
LGSGDLVAFRSAGAYGAVMSSEYNSRPLIPEVLVNGDQFAVIRPRPSFDEMINRDTIPEW
L
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggatcattttctctataaagacggtgtgttgcatgccgaagacgtaagcctggccgag
attgccgccgctgtcggtacgccggtctatgtctattccaccgccacgctgctacgccat
ttccacctctttgacgacgcgctctcgggcatggatcatctggtctgctacgcgatgaag
gccaattccaaccaagccgttctgcgcacactggcgcaggcaggcgcggggatggatgtg
gtctcgggcggggaataccgccgcgccaaggcggcaggcgtgccgggcgacaggatcgtc
ttttccggcgtcggcaaaacccgcgaagagatcgaattggcgctaaccggcggtatccgt
cagttcaacgtcgagagcgagccggaaatgatcctgctggatgtcgtggcgcgcgaattg
ggcaaagtggccccgatcaccattcgcgtgaacccggacgttgacgccaaaacccatgcc
aagatcgccaccggcaagagcgagaataagttcggcatccccatcgcccgcgcccgcgat
gtttatgccatggcggccaagttgccgggcttggagatcatcggcatcgacgtgcatatc
ggcagccagctcaccgatcttgccccctttgagcaggcctatggcaaggttgcggaactg
accgaagtgctgcgcgccgatggtcataacatccggcggctggaccttggcggcggtctg
ggcattccctatgagcgctccaacaccgccccgccactgccaacggattacggcgcgatg
gtgcagcgcacgctggggcatctgggctgcgaggtcgagatcgagccgggccgcctgatc
gcgggcaacgcaggtgtgctggtgagcgaagtgatctacttcaaatccggcgagggccgc
gatttcctgatccttgatgccgcgatgaacgatctgatacgtcccgcgatgtatgatgcg
tggcatgacatcgtgccgctgaacgaacccgcgcctggggcagagccgcgcccggtggat
atcgtcggcccggtctgcgaatccggtgatactttcgccaagcagcgaatgatgccggtg
ctcgggtccggtgatctggtggccttccgctctgccggagcctacggcgcggtgatgagc
agcgaatataattcgcggcccctgatccccgaggtgctggtcaatggcgatcaattcgcg
gttatccgcccacggccaagctttgacgaaatgataaaccgcgataccatccctgaatgg
ctctga

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