KEGG   Sulfitobacter dubius: R1T39_14735
Entry
R1T39_14735       CDS       T09506                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sdub  Sulfitobacter dubius
Pathway
sdub00010  Glycolysis / Gluconeogenesis
sdub00020  Citrate cycle (TCA cycle)
sdub00260  Glycine, serine and threonine metabolism
sdub00280  Valine, leucine and isoleucine degradation
sdub00310  Lysine degradation
sdub00380  Tryptophan metabolism
sdub00620  Pyruvate metabolism
sdub00630  Glyoxylate and dicarboxylate metabolism
sdub00640  Propanoate metabolism
sdub00670  One carbon pool by folate
sdub00785  Lipoic acid metabolism
sdub01100  Metabolic pathways
sdub01110  Biosynthesis of secondary metabolites
sdub01120  Microbial metabolism in diverse environments
sdub01200  Carbon metabolism
sdub01210  2-Oxocarboxylic acid metabolism
sdub01240  Biosynthesis of cofactors
Module
sdub_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sdub_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sdub_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sdub_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sdub00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    R1T39_14735 (lpdA)
   00020 Citrate cycle (TCA cycle)
    R1T39_14735 (lpdA)
   00620 Pyruvate metabolism
    R1T39_14735 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    R1T39_14735 (lpdA)
   00640 Propanoate metabolism
    R1T39_14735 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    R1T39_14735 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    R1T39_14735 (lpdA)
   00310 Lysine degradation
    R1T39_14735 (lpdA)
   00380 Tryptophan metabolism
    R1T39_14735 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    R1T39_14735 (lpdA)
   00670 One carbon pool by folate
    R1T39_14735 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdub04147]
    R1T39_14735 (lpdA)
Enzymes [BR:sdub01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     R1T39_14735 (lpdA)
Exosome [BR:sdub04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   R1T39_14735 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored HI0933_like NAD_binding_8 FAD_binding_2 GIDA Thi4 DAO AlaDh_PNT_C 3HCDH_N FAD_binding_3 UDPG_MGDP_dh_N Lycopene_cycl
Other DBs
NCBI-ProteinID: WOI28925
LinkDB
Position
complement(2982705..2984093)
AA seq 462 aa
MSSYDVIVIGSGPGGYVAAIRCAQLGLKTACVEGRETLGGTCLNVGCIPSKALLHATHML
HEAEHNFDEMGLKGKAPSVDWKQMLTYKDKTIETNTKGIEFLFKKNKIDWLKGWGSIPEA
GKVKVGDEVHEAKNIIIASGSEAASLPGVEVDEKTVVTSTGALELGKIPKKMVVIGAGVI
GLELGSVYARLGTEITVVEFLDAITPGMDPEVQKTFQRMLKKQGINFVMGAAVQKTEVAK
GKAKVSYKLRKDDSEHEIEADTVLVATGRKPVVKGMGLDDLGVKMTERGQIAVNEHWETS
VKGVYAIGDVIEGPMLAHKAEDEGMAAAEVIAGKHGHVNYGVIPGVIYTHPEVASVGETE
ATLKEAGREYKVGKFSFMGNARAKAVFAGDGFVKLIADKETDRILGCHIIGPGAGDLIHE
VCVAMEFGASAQDLAMTCHAHPTYSEAVREAALACGDGPIHM
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgtcgagctatgatgtcatcgtgatcggctccggccccggcggctatgtcgccgccatc
cgttgcgcgcaactgggcctgaaaaccgcctgtgtggagggccgcgaaacccttggcggc
acctgcctcaacgtgggctgcatcccctccaaggcgctgctgcacgccacgcatatgctg
catgaggccgagcataattttgacgagatgggcctcaaaggcaaagcaccttccgttgat
tggaagcagatgctgacctacaaagacaagaccatcgagaccaacactaaggggatcgaa
ttcctgttcaaaaagaacaagatcgactggctcaaaggttggggttcgatccccgaggcg
ggcaaggtcaaggtcggtgatgaggtccatgaggccaagaacatcatcatcgcttccggc
tccgaagcggcctccctgccgggcgtcgaagtcgacgagaagaccgtcgtaacctccacc
ggcgcgctggaactgggcaagatccccaaaaagatggtggtgatcggcgcgggcgtcatc
gggctggaactgggcagcgtctatgcgcgtctggggaccgagatcaccgtggttgaattc
cttgatgcgatcactccgggcatggaccccgaggtgcaaaagaccttccagcgcatgctg
aaaaaacaaggcatcaacttcgtcatgggcgccgccgtgcagaagaccgaagtcgccaag
ggcaaagccaaggtcagctacaagctgcgcaaagacgacagtgaacatgagatcgaagcc
gacaccgtgctcgtcgccacaggccgcaaacccgttgtcaaaggcatggggctggatgat
ctcggcgtcaaaatgaccgagcgcggccagatcgccgtgaacgagcattgggaaacctcc
gtcaaaggcgtctatgccatcggcgacgtgatcgaaggcccgatgctggctcacaaggcc
gaggacgaaggcatggccgccgccgaagtgatcgcgggtaaacatggccatgtgaactac
ggcgtgatccccggcgtgatctacacccacccggaggtcgcctccgtcggtgagaccgaa
gcgaccctcaaggaagcgggccgcgagtacaaagtcggaaagttctccttcatgggtaac
gcgcgggccaaggcagtctttgccggtgacggtttcgtcaagctgattgccgacaaggaa
accgaccgcatcctcggctgccacatcatcggccccggcgcgggcgatctgatccacgag
gtctgcgtggcgatggaattcggcgcctcggcgcaggatctggcgatgacctgccacgcg
cacccaacctattccgaagccgtgcgcgaagccgcactggcctgcggcgacggaccgatc
cacatgtag

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