KEGG   Solanum dulcamara (climbing nightshade): 129869989
Entry
129869989         CDS       T09577                                 
Name
(RefSeq) ubiquitin receptor RAD23c-like
  KO
K10839  UV excision repair protein RAD23
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03420  Nucleotide excision repair
sdul04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    129869989
  09124 Replication and repair
   03420 Nucleotide excision repair
    129869989
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:sdul03051]
    129869989
   03400 DNA repair and recombination proteins [BR:sdul03400]
    129869989
Proteasome [BR:sdul03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    129869989
DNA repair and recombination proteins [BR:sdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      129869989
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD UBA_7 Rad60-SLD_2 UBA_RAD5A Dsc3_N CUE TECR_N UBA_3 Ubiquitin_2 Ubiquitin_4 NQRA_N Crinkler
Other DBs
NCBI-GeneID: 129869989
NCBI-ProteinID: XP_055800519
LinkDB
Position
10:complement(63698936..63713484)
AA seq 399 aa
MKIFVKTLKGSHFEIEVKPEDTVADVKKNIETVQGSDVYPAAQQMLIHQGKVLKDGTTLE
ENKVAENNFIVIMLTKSKSSSGEGSAASTAATAKTPQSSTTTPSSTPASTAAQVPVASPA
AAASPAPAPAPAPAPAPAPAPAPASTVVPGSDVYGQAASSLVAGNNLDGAIQQILDMGGG
TWDRETVVRALRAAFNNPERAVEYLYSGIPEAAEVPPVGGSPPSVQAGNQPSQPQPAAQP
APVPAGGPNADPLNLFPQGLPSVGSNTAGANTLDFLRNSQQFQALRAMVQANPQILQPML
QELGKQNPHLMRLIQEHHADFLRLINEPVEGGEGNNVLGQLAAAMPQAISVTPEEREAIE
RLEQMGFDHDLVLEVFFACNKNEELAANYLLDHMHEFEE
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgaagattttcgtgaaaacactcaaaggctctcactttgaaatagaagtcaaacctgaa
gatacggttgccgatgtgaagaagaacatagaaacagttcagggttcagatgtttatcct
gctgcccagcagatgcttatccaccaggggaaggtacttaaagatgggacaacactagaa
gaaaataaagttgctgaaaacaactttatagtaatcatgctaacgaagagtaagagctca
tctggagaaggttcagcagcgtcaactgcagcaacagctaagacaccacagtcaagtacc
actacacctagttcaactcctgcatctacagctgctcaagtcccagttgcatcgcctgca
gcagctgcctccccagcgccagcccctgccccagccccggccccagccccagccccagcc
ccagctcctgcatcaactgttgtgccgggatctgatgtctatggccaagctgcttcaagc
ttggttgctggtaacaaccttgatggagcaattcagcagattcttgacatgggtggtgga
acgtgggatagggagacagttgttcgagccctacgggcagcttttaacaatcccgagagg
gctgttgaatacttatactctggtatccctgaggcggcagaggtccctcctgttggcgga
agtccaccaagcgtgcaggcaggtaatcaaccgtctcagcctcaacctgcagcacaacca
gcacctgttcctgcaggcggaccgaatgcagatcctttgaatctctttcctcagggtctt
cccagtgtgggatctaatactgctggtgcgaacaccttagactttctaaggaacagtcag
cagttccaagctttacgggcaatggttcaggccaatccacaaattttgcagcccatgctt
caggagctaggcaagcagaatccccacctaatgaggcttatacaggagcaccacgctgat
tttcttcgccttatcaatgagcctgttgaaggaggagaaggaaacaacgtattgggccag
cttgcagcagcaatgccacaggctatatcggtaacacccgaagagcgtgaagccatagaa
cgtctcgagcaaatgggctttgatcatgaccttgtactggaggttttctttgcctgcaac
aaaaatgaggagctcgctgctaactacctcttagatcacatgcacgagtttgaagagtga

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