Solanum dulcamara (climbing nightshade): 129869989
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Entry
129869989 CDS
T09577
Name
(RefSeq) ubiquitin receptor RAD23c-like
KO
K10839
UV excision repair protein RAD23
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03420
Nucleotide excision repair
sdul04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129869989
09124 Replication and repair
03420 Nucleotide excision repair
129869989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sdul03051
]
129869989
03400 DNA repair and recombination proteins [BR:
sdul03400
]
129869989
Proteasome [BR:
sdul03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
129869989
DNA repair and recombination proteins [BR:
sdul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
129869989
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Rad60-SLD_2
UBA_RAD5A
Dsc3_N
CUE
TECR_N
UBA_3
Ubiquitin_2
Ubiquitin_4
NQRA_N
Crinkler
Motif
Other DBs
NCBI-GeneID:
129869989
NCBI-ProteinID:
XP_055800519
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Position
10:complement(63698936..63713484)
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AA seq
399 aa
AA seq
DB search
MKIFVKTLKGSHFEIEVKPEDTVADVKKNIETVQGSDVYPAAQQMLIHQGKVLKDGTTLE
ENKVAENNFIVIMLTKSKSSSGEGSAASTAATAKTPQSSTTTPSSTPASTAAQVPVASPA
AAASPAPAPAPAPAPAPAPAPAPASTVVPGSDVYGQAASSLVAGNNLDGAIQQILDMGGG
TWDRETVVRALRAAFNNPERAVEYLYSGIPEAAEVPPVGGSPPSVQAGNQPSQPQPAAQP
APVPAGGPNADPLNLFPQGLPSVGSNTAGANTLDFLRNSQQFQALRAMVQANPQILQPML
QELGKQNPHLMRLIQEHHADFLRLINEPVEGGEGNNVLGQLAAAMPQAISVTPEEREAIE
RLEQMGFDHDLVLEVFFACNKNEELAANYLLDHMHEFEE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttcgtgaaaacactcaaaggctctcactttgaaatagaagtcaaacctgaa
gatacggttgccgatgtgaagaagaacatagaaacagttcagggttcagatgtttatcct
gctgcccagcagatgcttatccaccaggggaaggtacttaaagatgggacaacactagaa
gaaaataaagttgctgaaaacaactttatagtaatcatgctaacgaagagtaagagctca
tctggagaaggttcagcagcgtcaactgcagcaacagctaagacaccacagtcaagtacc
actacacctagttcaactcctgcatctacagctgctcaagtcccagttgcatcgcctgca
gcagctgcctccccagcgccagcccctgccccagccccggccccagccccagccccagcc
ccagctcctgcatcaactgttgtgccgggatctgatgtctatggccaagctgcttcaagc
ttggttgctggtaacaaccttgatggagcaattcagcagattcttgacatgggtggtgga
acgtgggatagggagacagttgttcgagccctacgggcagcttttaacaatcccgagagg
gctgttgaatacttatactctggtatccctgaggcggcagaggtccctcctgttggcgga
agtccaccaagcgtgcaggcaggtaatcaaccgtctcagcctcaacctgcagcacaacca
gcacctgttcctgcaggcggaccgaatgcagatcctttgaatctctttcctcagggtctt
cccagtgtgggatctaatactgctggtgcgaacaccttagactttctaaggaacagtcag
cagttccaagctttacgggcaatggttcaggccaatccacaaattttgcagcccatgctt
caggagctaggcaagcagaatccccacctaatgaggcttatacaggagcaccacgctgat
tttcttcgccttatcaatgagcctgttgaaggaggagaaggaaacaacgtattgggccag
cttgcagcagcaatgccacaggctatatcggtaacacccgaagagcgtgaagccatagaa
cgtctcgagcaaatgggctttgatcatgaccttgtactggaggttttctttgcctgcaac
aaaaatgaggagctcgctgctaactacctcttagatcacatgcacgagtttgaagagtga
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integrated database retrieval system