Solanum dulcamara (climbing nightshade): 129869992
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Entry
129869992 CDS
T09577
Name
(RefSeq) nuclear pore complex protein NUP205
KO
K14310
nuclear pore complex protein Nup205
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129869992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129869992
03036 Chromosome and associated proteins [BR:
sdul03036
]
129869992
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129869992
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129869992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup192
RNAseD_HRDC_C
Motif
Other DBs
NCBI-GeneID:
129869992
NCBI-ProteinID:
XP_055800525
LinkDB
All DBs
Position
10:3541916..3591115
Genome browser
AA seq
1874 aa
AA seq
DB search
MVSPKILLSLIESTVLGPSPPTPSQRIEMLHAIRHSLPSLQSLLSYPPPKPSDRVQVQSK
EVRLPDSGPISLDDQDVQIALKLSDDLHLNEVDSVRLLVSANQEWGLLGREPLEIFRLAA
GLWYTERRDLITALYTLLRAVVLDQGLEPDLVADIQRFLGDLINAGVRKQLISLIKELNL
KEPSGLGGPNCERYILDSRGALVERRAVVSRERLILAHCLVLSVLVVRASPKDVKDVFSA
LKDNAAGLSDSTDTLSHQITYSLLFSLVVALISDALSAVPDKTSVLSHDASFRQEFQESV
MVAGTDPVVEGYVDCLRSAWVVHLMLIHDGLDAKDTSASASFNNDIRNIYSCLEVIFSNN
VFLSWLNKILLTPAYQNDDEDMIYMYNAYLHKMITCLLSHPLAKDKVKEAKEKAMTTLSP
YRLSTSHDYTVEGVGHFQKAAEPAPQTFVSLLEFVSEIYQKEPELLSGNDVMWTFVNFAG
EDHTNFQTLVAFLRMLSTLASSAEGASKVFELLQGKTFRSIGWSTLFDCLSIYEEKFKQA
LQIPGAVLPEIQEGDAKALVAYLNVLQKVVENANPVDWKNWFPDIEPLFKLLGYENVPPY
LKGALRNAIATFVQVSPVLKDTTWRYLEQYDLPVVVGNTTQSLTTQVYDMRFELNEIEAR
REQYPSTISFINLLNTLIAAEKDVGDRGHRFIGIFKFIYDHVFGPFPQRAYANPCEKWQL
VIACLKHFQMMLNMYSIRDEDIDSVVDQSQLSETGQSAPLQMQLPVIELMKDFMSGKTVF
RNIMSILSPGVNYLISERSSQIYGQLLEQAVLLSLEILNLVLEKDLAMSEFWSPLYQPLD
VILSQDQSQVVALLEYVRYDFQPRIQQSSIKIMNILSSRMVGLVQLLLKSNAAGCLVEDY
AACLELRSEECQLIEDCREDSGVLILQLLIDNISRPAPNITHLLLKFDVDGAVERTVLQP
KFHYSCLKIILDVLEKLLKPDINALLHEFAFQLLYELCTDPLTCNPMMDLLSTKKYWFFV
QHLDLIGTAPLPRRNSSQALRISSLHQRAWLLKLLTIELHAADMSSSTHREACQSILSQL
FGEGIFEHDVDLGVSSPYSHISPGVNGARMISKTKVLELLEVVQFKSPDTVLKSSQAVSS
SKYGFLAEDILTNPATSEKGGVYYYSERGDRLIDLAAFRDKLWQKYNLFNPQHSSFNTEV
ELNEIRDTVHQLLRWGWKCNKNLEEQAAQLHMLTGWSQIVEVSASSKISSLPNRSEILFQ
LLDASLGASGSPDCSLKMALILTQVGVTCMAKLRDERFLCPSGLNSDTVTCLDIMMTKQL
SNGACHSILFKLILAILRNESSEALRRRQYALLLSYIQYCQHMLDPDLPTTVMQLLTMDE
QENDDLDLEKIVKDQTEMAHANFSIVRTEAQSLLDLIIKDATHGSESGKTISFYVLDALI
CIDHEKFFLSQLQSRGFLRSCLMNINNFSQDGGLSLESMQRVCTLEAKLALLLRFSHKYG
KSGAQVLFSMGAYEHISACKALNMQLKGSYRRMDGKFGRELSVDVDKQRMIIAPILRLVF
SLTSLVDASEFFEVKNKVVREVIEFVRSHQLLFDQILLEDLSDADDLTMEQINLVVGILT
KIWPYEETDEYGFVQGLFVMMRFLFSREPDSFIKNQSVHFLEEQRKAEMNVSRLCFSLSS
YLCFLVTKKSLRLPVSDGPMDYRTSAGQQQPTLNLLGFLLNSLTTALERTTEDRYLLLSK
IQDINELSRQEVDEIINMCVPKGCISSSENIQKRRYVAMLEMCQIVGDRNQLMTLLLLLA
ENVMNIILVHFQDSSFECGTKPYSKDDLNLLCGKLISALERLELLSEDKTGHDLKVFRRL
ASSLKEISIQKSPA
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccccgaagattttactatctctaatcgaatctaccgtattgggtcccagtcct
cctacgccatcgcagaggattgagatgcttcacgccattcgtcactctcttccatctctc
cagtccctactttcctatccgccccccaagccttcagaccgagttcaagtccagtccaaa
gaagtgagacttccagattctggcccaatttcactggatgatcaggatgttcaaattgcc
ctaaagttgagtgatgatctgcatcttaatgaagtagactctgttcggttgcttgtttct
gccaatcaagagtggggattattgggacgtgagccattagagatattccgtcttgcagct
ggactgtggtatacagagagaagagatcttataacagcactttacacactgttgagggct
gttgtccttgaccaaggacttgaacctgatcttgtggcagatattcagagatttttgggt
gatctcattaatgctggagttagaaagcagttgatttcactcataaaggaactcaatcta
aaagagccatctggtttgggcgggcctaactgtgaacgctatattctggattcaagagga
gctttggtggaaaggagagctgttgtttccagggaaaggctcattctggctcattgcctt
gtcctttctgttttggttgtgcgtgcaagccctaaagatgtgaaggatgtcttttctgct
ctaaaggataatgcagcagggctaagtgatagcactgacactttaagccatcagataaca
tatagtcttctcttctcccttgtggtggctctcatatcagatgcattgagtgcagtacct
gataaaacatcagtcttgtctcatgatgcgtcctttaggcaagaattccaggaatctgta
atggtcgctgggactgatcctgttgttgagggctatgttgattgcttaaggagtgcgtgg
gttgtacatcttatgttaatacacgatgggcttgatgcaaaagacacatcagcaagtgct
tcatttaataatgatataaggaacatctattcatgcttggaagttatattctccaacaat
gtcttcctgtcttggctgaataagatcctcctaactcctgcctatcagaatgatgatgag
gatatgatctacatgtacaatgcctatttgcacaagatgataacatgtcttttgtctcat
ccactggccaaggacaaggttaaagaagcaaaagagaaggctatgacgacacttagtccg
taccgcttgtctacttcacatgattatactgtggagggagttgggcattttcagaaggcc
gctgaacctgcaccacaaacttttgtctctctcttggagtttgtgagtgaaatttaccag
aaagaacctgagctgctgtctggtaatgatgttatgtggacttttgtcaacttcgctgga
gaggatcacactaactttcagacacttgtagcatttttaagaatgctgagtaccttggct
tctagtgctgaaggtgcttccaaagtttttgagttacttcagggaaagacattccgttct
atcggatggagcactttatttgattgtttatcaatttatgaggagaagttcaaacaagcc
cttcaaattcctggggcagttctgccagagatacaggaaggagatgcaaaagcactcgtt
gcttacttgaatgttctgcaaaaggttgttgagaatgcaaatcccgtagactggaagaat
tggttccctgatattgagccattgttcaaactccttggttatgaaaatgtccctccttat
cttaagggtgcattaagaaatgccatagctacttttgttcaagtatcaccagttctgaaa
gatacaacttggaggtatttagagcaatatgatctaccagtagttgttgggaacacaaca
caatccttgacaacacaggtttatgacatgcgatttgagctgaatgaaatagaggctaga
agggagcaatacccttcaactatatcattcattaacctgttgaatactcttattgccgcg
gaaaaggatgttggtgatagagggcatagattcattggcatctttaaattcatttatgat
catgtctttggaccattccctcagagagcctatgctaatccttgtgagaagtggcaactt
gtcatagcttgcctcaaacatttccagatgatgctgaatatgtatagtatcagagatgag
gatattgacagtgttgtggaccaatctcagctgtcagaaacaggtcaatctgctccgctg
cagatgcagctgcctgtaatagagttgatgaaagattttatgagtggtaaaactgtgttc
cggaatatcatgagtattctttcaccaggagtcaattacctaatttctgaaagatcaagt
caaatttatgggcaacttcttgaacaagctgtcctcctttctctggaaattttaaatctc
gtattggagaaagatttagctatgtctgagttttggagtcctttgtatcagcctctagat
gtcattctctcacaagatcagagccaagttgtggctttattagagtatgttagatatgat
tttcagccccgtattcaacaatcatctatcaaaataatgaacatcctaagttctcgcatg
gtcgggcttgttcagttgctcttaaaatccaatgctgcagggtgcttggttgaggattat
gctgcctgcttagagctgcgatctgaagaatgtcaacttatagaggattgccgtgaagat
tcaggtgttctcatactacaactgcttattgataatattagccggcctgccccgaatatc
acacatctattgctcaaatttgatgtcgatggcgctgttgagaggaccgtgcttcagcca
aaatttcactatagttgcttgaagatcattcttgatgtgttggaaaaacttctgaaacct
gacatcaatgcattgctccatgaatttgcatttcagcttctttatgagttatgtaccgat
cccctgacttgtaatcctatgatggatttgttgagcaccaaaaagtattggttctttgta
cagcatctggatttaattggcactgctccacttcccagaaggaatagcagtcaggcactt
cgtatcagttcccttcatcagagagcatggctgttgaagcttctaacaatagaattgcat
gcggctgatatgtctagttccactcatcgagaagcttgtcaaagtattctatctcaacta
tttggagagggaatttttgaacacgatgttgatctcggtgtatcttctccctatagtcat
atcagtcctggagtgaatggagccagaatgattagtaaaactaaggtattggagttgctt
gaagttgtccagtttaaatctcctgatactgtgttgaaatcttcacaagcagtttcaagt
tcgaaatatgggtttctggctgaagatatacttaccaatcctgctacttctgaaaagggt
ggtgtttattattactcagaacgtggagaccgtttaattgatctagctgcatttcgtgac
aaattatggcagaaatacaacttgtttaatccccagcatagctcctttaatactgaagtt
gagctaaatgaaattcgagatacagtccaccagctgttacgatggggttggaaatgcaac
aaaaatcttgaagaacaagcagctcagcttcatatgttaactggctggtctcaaattgtt
gaggtctctgcctccagcaaaatatcctctcttcccaaccgttctgaaatattatttcag
ttgcttgatgcctctctcggtgcttctggttctcctgactgctcattgaagatggcactg
atactgacacaggttggtgtcacatgcatggccaaactacgtgatgaaagattcttatgc
cctagtggtttaaactctgatactgtcacttgtcttgacatcatgatgacaaaacaatta
tctaacggagcatgccattctattctattcaagctcatactggcgattcttagaaacgaa
tcatcagaagcattgaggaggcgccaatatgctttgctccttagctatatccagtactgt
cagcatatgcttgatcctgatcttccaaccacagtaatgcaattgttgacaatggatgaa
caggaaaatgatgatctggatcttgaaaagattgtcaaagatcaaactgaaatggcacat
gcaaatttttcaattgtaaggacggaagctcaatcacttctagatctgatcataaaagat
gcaacccatggcagtgaatctggaaagactatctcgttctatgtgttggatgctttaatt
tgcattgatcatgaaaagtttttcttgagtcaattgcaaagcagaggctttttaaggtct
tgccttatgaacatcaataacttttctcaggatggtgggctctctttggagtcaatgcag
cgtgtctgcactcttgaagcgaaacttgctcttcttctgagatttagccacaagtatggt
aaatctggggcccaggtgcttttttcaatgggtgcatatgagcacatatctgcctgtaag
gcactgaatatgcaattgaagggaagctaccgacgcatggatggcaaatttggaagagaa
ttgtcagttgatgttgataaacaacgaatgatcatagctccaatcttgagattggtgttt
tcacttacttcattggttgatgcatctgaattttttgaggttaaaaataaagttgtgcgt
gaagtcattgaatttgtaagaagtcatcaattactttttgatcaaatccttctagaagat
ctttctgatgctgatgacttgacaatggaacaaataaatctggttgttggcatacttaca
aagatttggccatatgaggagaccgatgaatatggttttgttcaagggctttttgtgatg
atgcgttttcttttctctcgtgagccagactcttttattaaaaaccaatctgtacatttt
ctggaggaacagcggaaggcggaaatgaatgtatctcgtctttgctttagcctgagctct
tatctctgttttcttgtaacgaagaagtccttaagattgccggtctcagatggtccaatg
gactatcgcacttctgctggtcagcaacagccaaccttgaatttacttggttttcttctc
aactctctgactacagcattggaaagaaccactgaggacagatatttactgcttagcaag
attcaagacataaatgaactatcaagacaggaagtggatgaaatcatcaatatgtgtgtt
cccaagggttgtatttcatcgtccgaaaacattcagaaaaggagatatgtcgcaatgttg
gagatgtgccagattgttggagatagaaatcaacttatgacactattgcttttactggcg
gaaaacgtgatgaatattatcctcgttcattttcaggacagttccttcgaatgtggcacc
aagccctactcaaaagacgacttgaatttgctatgtggaaagttaatctctgctttggag
aggcttgaattactaagcgaggataaaacaggtcatgaccttaaggtgttccgaagatta
gctagttctttgaaagaaatatcaattcagaagtcacctgcttga
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