Solanum dulcamara (climbing nightshade): 129870005
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Entry
129870005 CDS
T09577
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
129870005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdul04040
]
129870005
Ion channels [BR:
sdul04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
129870005
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
129870005
NCBI-ProteinID:
XP_055800542
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Position
10:complement(302511..312951)
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AA seq
692 aa
AA seq
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MEALRHSGHATSSPSRSFKRGMRKGSEGLKSIGRSLGFGVSKAVFPEDLKVSEKKIFDPQ
DKLLLLWNKLFVISCILAVSVDPLFFYLPVFDDKSNCLQIDRKLAVIATTLRTVVDAFYL
IHIALQFRTAYIAPSSRVFGRGELVIDPGEIAKRYLRSYFIIDLLAVVPLPQIVAGRFLQ
RSTGSDVLATKQALLYIILLQYIPRFVRVIPLTSELKRTTGVFAETAWAGAASYLLLYIL
ASHIVGSFWYLLSVERYDTCWERACKHNAPCQTDFLYCGNQDMIGYNAWSNISESVLNGA
CPRSGDNPPFDFGIFEQALSSGIVFSMKFVTKYCYCLWWGLQNLSTLGQGLKTSTFPGES
LFSIALAILGLILFALLIGNMQTYLQSLTIRLEEMRVRRRDSEQWMHHRLLPQDLRERVR
GYDQYKWQETRGVDEENIVQNLPKDLRRDIKRHLCLALVKRVPLFANMEERLLDAICEHL
KPCLYIEHTYLVREGDPVDEMLFVIRGRLESVTTDGGRSGFFNRSLLKESDFCGEELLTW
ALDPKSGSNLPSSTRTVKALTEVEAFALKADELKFVASQFRKLHSRQVQHTFRFYSQHWR
TWAACFIQAAWRRFTKRKLMELQRKEDEEAEALAGASSNSGGASFSIGATFLASRFAANA
LRGVHKNRNLKSARELMKLQKPPEPDFSEDTE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggaagctttaagacattctggccatgcaactagcagcccatcaaggtcttttaagaga
ggaatgagaaaaggatctgaaggactaaagtcgattggtcgatcactcggatttggtgtc
tctaaggcagtatttcctgaagatctgaaagtttcggagaagaagatttttgatcctcaa
gataaactccttctcttgtggaataagctatttgttatatcatgcattctggccgtgtct
gtggatccactgtttttctaccttccagtttttgatgacaagtcaaattgccttcagatt
gatcgaaagctagctgtgatagccacaacgcttcgtaccgttgttgatgctttctatctt
attcacattgcacttcagtttcgtacagcttatattgcaccatcatctcgagtttttgga
aggggtgaacttgtgatagatcctggagaaattgctaaaagatacttgcgatcctatttt
atcattgatcttcttgctgtggttcccttgcctcagattgtagctgggagattcttgcag
agatcgacaggttctgatgtactggctaccaaacaagctttgctttatatcattttgctt
cagtatatccccagatttgtccgagttatacccttaacgtcagaattgaaaagaactact
ggtgtcttcgctgaaactgcgtgggctggtgctgcatcctatttgctgttgtacatactt
gctagtcatatagttggctccttttggtatttgctttccgtggaacgctatgatacatgc
tgggaaagagcttgtaaacataatgcaccatgccaaactgatttcttgtactgcggcaat
caagatatgatagggtataatgcttggagcaatatcagtgaatcggttttaaatggagca
tgccctcggagtggtgacaatccaccatttgattttggaatttttgagcaggctttgtca
tcaggcatagttttctcgatgaagtttgtgacaaaatattgctactgtttgtggtgggga
ctccagaatttaagtacccttggacagggacttaaaactagcacatttcccggggagtct
ttattctctattgcactggcaatactcggcctcattctctttgcactgttgattggtaac
atgcagacataccttcaatctcttactattcgacttgaggagatgagagttagaagacgc
gactcagaacagtggatgcatcaccgattgcttccacaagatcttcgagaacgggttagg
ggctatgatcagtacaagtggcaagaaacacgtggagtggatgaagaaaatatagttcag
aatttgcccaaggatctcaggagggatattaaacgtcatctttgtctggctctagtgaag
agggtgcctctatttgcaaatatggaggagagattgctcgatgcaatttgtgagcatcta
aaaccctgtttgtacatcgagcacacttaccttgttcgagaaggagatccagtggatgaa
atgctctttgtcatacgaggtcgccttgagagtgtgacaactgatggtgggagaagcggt
ttcttcaaccgcagtttgttaaaagaatccgacttctgtggagaagaacttcttacttgg
gcattagacccaaaatcaggttctaacctcccttcttctactcgtaccgtgaaagctcta
acagaggtagaggcttttgcattaaaggcagatgagttgaaattcgtcgccagtcagttc
agaaagctccacagtagacaggtccagcacacgttccgtttctactcccagcactggaga
acttgggctgcttgctttatccaagcagcatggaggcgtttcactaaaaggaaacttatg
gaacttcaaagaaaagaagacgaagaagcagaagcgttggccggggccagtagcaactcg
ggtggagcttcttttagtattggggcgacattcttggcatcgagatttgcagctaatgct
ctccgaggcgttcacaagaatcgaaatctcaagtctgctagggagcttatgaagctgcaa
aaacctccagagcctgatttcagtgaagatactgagtga
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