Solanum dulcamara (climbing nightshade): 129870007
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Entry
129870007 CDS
T09577
Name
(RefSeq) heat shock cognate 70 kDa protein 2-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03040
Spliceosome
sdul04141
Protein processing in endoplasmic reticulum
sdul04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129870007
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129870007
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129870007
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdul01009
]
129870007
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdul03041
]
129870007
03009 Ribosome biogenesis [BR:
sdul03009
]
129870007
03110 Chaperones and folding catalysts [BR:
sdul03110
]
129870007
04131 Membrane trafficking [BR:
sdul04131
]
129870007
03051 Proteasome [BR:
sdul03051
]
129870007
03029 Mitochondrial biogenesis [BR:
sdul03029
]
129870007
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdul04147
]
129870007
Protein phosphatases and associated proteins [BR:
sdul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
129870007
Spliceosome [BR:
sdul03041
]
Complex B
Other components
Prp19 complex
129870007
Complex C
Prp19-CDC5 complex
129870007
Ribosome biogenesis [BR:
sdul03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
129870007
Chaperones and folding catalysts [BR:
sdul03110
]
Heat shock proteins
HSP70 / DNAK
129870007
Membrane trafficking [BR:
sdul04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
129870007
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
129870007
Proteasome [BR:
sdul03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
129870007
Mitochondrial biogenesis [BR:
sdul03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
129870007
Exosome [BR:
sdul04147
]
Exosomal proteins
Proteins found in most exosomes
129870007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Radial_spoke_3
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
129870007
NCBI-ProteinID:
XP_055800545
LinkDB
All DBs
Position
10:70634565..70637567
Genome browser
AA seq
652 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGIWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIPGPADKPMIVVNYKGEEKQFSA
EEISSMVLIKMKEIAEAFLGTTIKNAVVTVPAYFNDSQRQATKDAGIISGLNVMRIINEP
TAAAIAYGLDKKSSSTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
TTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSGVHEIVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELTGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKK
KVEAKNALENYAYNMRNTIKDEKIASKLSPDEKKKIEDSVEQAIQWLDGNQLAEADEFED
KMKELESICNPIIAKMYQGGAGGPDMAGGMDEDGPSAGASSTGAGPKIEEVD
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaaaggtgaaggaccggcgataggaattgatctcggaacgacctattcatgt
gtaggtatatggcagcatgatcgtgttgagattatagctaatgatcaaggaaacaggact
acaccgtcgtatgtggcgtttactgatacggagcgtctgataggagatgctgcgaagaat
caagttgcaatgaaccctaccaatactgtttttgatgccaagcgattaattggtaggaga
ttcagtgacccatcggtacaaagtgacatgaagctttggccttttaaggtcatcccagga
cctgctgacaagcctatgattgttgtcaattacaaaggtgaagagaaacaattctctgct
gaagagatctcctccatggttcttattaagatgaaggagattgcagaggcttttcttgga
acaacaataaagaatgctgttgttactgtgcctgcttacttcaatgactcacaacgtcag
gctactaaggatgctggaattatttctggcctcaacgttatgcgtattatcaatgagcct
actgctgctgcaattgcatatggacttgataagaaatcaagcagtacaggggagaagaat
gtgcttatttttgacttgggtggtggtacatttgatgtctcacttcttaccattgaagaa
ggtatttttgaagtgaaagctactgctggtgatactcatcttggtggagaagattttgac
aacaggatggttaatcactttgttcaagaattcaagaggaagcacaaaaaggacattagt
gggaatcctagagctcttaggagattaaggactgcatgtgaaagggcaaaaagaacactc
tcatcaactgctcagactacgatcgagattgattctctttatgagggaattgatttctat
acaaccattactcgtgctcgatttgaggagcttaacatggatcttttcagaaagtgtatg
gagcctgttgagaagtgtttgagggatgctaaaatggacaagagtggtgttcatgaaatt
gttcttgttggtggctctaccagaattccaaaggtgcaacaattgttgcaggacttcttt
aatgggaaggaactctgtaagagcatcaacccggacgaggctgttgcctatggtgccgct
gtgcaagctgcaatcttgagtggtgaagggaatgaaaaagttcaggatctattgctattg
gatgttacccctctctcccttggtctggagactgctggaggagttatgaccaccttgatt
ccgaggaacaccacaatcccaactaagaaagagcaggtgttttcaacgtactccgacaat
caacctggtgtcttgattcaagtttatgaaggtgaaagagctcggactagagataacaac
ttgctaggtaaatttgaactcactggcattcctccagcaccaagaggtgtcccccaaatc
actgtatgcttcgacattgacgcgaatggtattttaaatgtctctgctgaggataaaaca
actggacagaaaaacaagattaccatcacaaacgacaaaggaagattgtccaaggaagag
attgaaaaaatggttcaagaagccgaaaagtacaaagctgaagatgaagagcacaagaag
aaagtggaagccaagaatgccttggaaaattatgcctacaacatgaggaacaccatcaag
gatgagaagatcgcttcaaaactttctcctgatgagaagaagaagatagaggattcggtt
gagcaagcaattcaatggcttgatggaaatcaacttgcggaggctgacgagtttgaggac
aagatgaaggagcttgagagcatatgcaaccccattatcgcaaagatgtaccagggtggt
gctggtggtcctgacatggctggtggcatggatgaagatggcccttcagctggtgctagc
agtactggtgcaggccctaagattgaagaagtcgattaa
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