Solanum dulcamara (climbing nightshade): 129870049
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Entry
129870049 CDS
T09577
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00240
Pyrimidine metabolism
sdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
129870049
Enzymes [BR:
sdul01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
129870049
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
129870049
NCBI-ProteinID:
XP_055800603
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Position
10:complement(69162615..69174125)
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AA seq
345 aa
AA seq
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MASSADFRLAILSRHITSAAAASSASKAGSDGQNLGWIKISREVTEALKHGSPIVALEST
IISHGMPYPQNFETAKELEVIVRENGAVPATIAILNGVPCIGLTTEELEILARLGSKARK
TASRDIALVMAGRENGATTVSATMYLASKVGIPVFVTGGIGGVHRHGENTMDISSDLTEL
GNTPVAVISAGIKSILDIPRTLEYLETQRVTVAAYKTNEFPAFFTQTSGCKAPARVESPE
HCARVIDANIRLERKSGILIAVPIPREHSASGSLIESAIQQAIQEAREKKITGNAETPFL
LARVNELTGGASLASNIALVKNNARVGAKIAVSLAQLQNHSDKRL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttccgctgattttagactagcaatccttagtcgacacatcacttcagcagca
gcagcttcttctgcttctaaggctggctcagatggtcaaaatttggggtggattaagata
tcacgggaggtaacagaagcattaaaacatggaagcccgattgttgcattggaatcgact
ataatatctcatggaatgccgtatcctcagaatttcgagacagcgaaagagttggaggtc
attgtgagggagaatggagctgtacctgccacaatcgctattctgaatggcgtaccatgc
ataggcttgactacagaagaactagagattctagcacgtcttggtagcaaagctcggaaa
actgctagtagagacattgcacttgttatggcaggcagggagaatggggcaactactgtt
tctgcaacaatgtatcttgcttcgaaggttggtattccagtatttgttactggaggtatt
ggaggagtacatagacatggagagaacacaatggatatttcttctgatcttactgagctt
ggaaatactcctgtggctgtgatctcggctggtataaaatcgatactagatattcctcga
acacttgaatatttggaaactcaaagagttactgttgcagcttataaaaccaatgagttc
cctgctttcttcacacaaaccagtggctgcaaggctcctgctcgagtagaatcaccagaa
cattgtgctcgagttattgatgcgaacataagactcgagcggaagagtggaatcttgata
gcagtccccattccaagggagcattctgcttctggaagtttaattgagtcggcaatacaa
caagctatccaagaagcacgagagaagaagattactggcaatgctgaaactccgttcttg
ctagcaagagtcaatgaacttactggtggagcatctctggcttcaaacattgctctcgtg
aaaaataatgcgagggttggtgctaaaattgctgtttcgcttgcccagcttcaaaaccat
agtgataaaaggttgtaa
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