Solanum dulcamara (climbing nightshade): 129870132
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Entry
129870132 CDS
T09577
Name
(RefSeq) two-component response regulator ORR21
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
129870132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdul03000
]
129870132
Transcription factors [BR:
sdul03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
129870132
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
APC_r
Motif
Other DBs
NCBI-GeneID:
129870132
NCBI-ProteinID:
XP_055800721
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All DBs
Position
10:66948171..66958955
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AA seq
654 aa
AA seq
DB search
MVSMSKDGATCKSEATVVTDHFPVGLRVLVVDDDVVCLRIIEQMLRRCNYSVTTCTQAMV
ALNLLRERRGTFDIVLSDVHMPDMDGFKLLELVGLEMDLPVIMMSGDGRTNLVMRGVQHG
ACDYLIKPIRDEELKNIWQHVVRKRYNSSKEPECSGSLDDNDRYKRGSDDAECASSVIEG
SDGVLKPQKKKREAKEEDDTEMENDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPK
RILELMNVPGLTRENVASHLQKFRLYLKRLSGVVQQHGGLPSTFCGHIEQNSELGSLGRL
DIQALAASGQIPPETLTALHAEFLGRSTSNLVLPAVEQQNLLQASLQQAKCIPVDQVVAY
GQPLLKCPPNISNYKHLSQAILSAEDVHSGFGAQRVKNICMVPSSNPNGLAAPNSNMLMA
MMQHQQQWQKKQQLELQHRQSGPPEVNHSINVQPSCVVLPSQLPGNFQVGDCPASISRAG
SLSKSSAIDYGVRSPKSNNSSGVVQVLDRELKPECGLNRLSSEGSLSQSCSINADNSVGF
QLHNLSSAFGSSKQLPGLIPNHLGSPVSYVINSSQVLDQGRMRNPGVGKGSSIPSRFAVD
ESDSSMCSLNTAKIYLEDTKVKQEPNMNVMENAKVGPANFQKFQPGDLMSVFND
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggtaagtatgagtaaagacggtgcaacgtgtaagtccgaagctacagtagtcactgat
cattttccagtagggttaagagtccttgtggttgatgacgacgtcgtttgcctccgaatt
attgagcaaatgctacggagatgtaattattcagttactacttgtacgcaagctatggtg
gcattaaacctattacgtgaaaggagggggacttttgatattgtactgagtgatgttcat
atgcctgatatggatggctttaaacttcttgagcttgttgggttggaaatggaccttcca
gtaataatgatgtcaggtgatggaagaaccaacctcgtcatgaggggagttcaacatggg
gcttgtgattatttgatcaagcctatacgggacgaggagctaaagaatatctggcagcat
gttgttaggaaaagatataactccagtaaagagcctgaatgttctggtagcttggatgat
aatgatcgttacaagcgaggaagtgatgatgctgaatgtgcttcttctgtaattgaaggc
tcagatggagtactaaaaccacagaaaaagaaaagagaagccaaagaagaagatgacact
gaaatggaaaatgatgacccaagtactacaaaaaagccacgcgtagtctggtcagtggag
cttcatcagcaatttgttagtgcagtcaaccaacttggcattgataaggctgtacctaag
agaatccttgaactgatgaatgttcctggtttgacaagagaaaatgtggcaagccatctg
cagaaatttaggctatacttgaagaggttaagtggagtagttcagcaacatggtggcctc
cccagtaccttctgtgggcatatagaacagaattcagaacttggttcactagggagattg
gacattcaagcactggcagcctctggccaaattcctcctgaaactttgacagctcttcat
gccgagtttttaggtagatcaacaagtaacttggttttaccagcagtggagcaacagaat
ctcctacaagcttccctgcagcaagcaaagtgcatacctgttgaccaagttgtggcttat
ggtcagcctctgttgaaatgccctcccaacatttctaattataaacatctttctcaagct
atcttgtctgctgaagatgttcattcaggattcggagctcagcgagtaaaaaatatatgt
atggtccctagcagcaatcccaacgggctagctgctccgaacagcaacatgttaatggca
atgatgcaacatcagcaacaatggcaaaagaagcagcagctggaactgcaacatagacaa
tctggacctcctgaggtcaaccattcaattaatgtgcaaccttcttgcgttgtattgccc
tctcagttgccaggtaatttccaagtgggagattgtcctgcttccatcagccgcgctggc
agtctgagtaaatcttcggcgattgattatggagttcgctcgccaaaatcaaacaattca
tcaggtgtggttcaagtgttagacagggaactcaaaccagaatgtggcttaaacaggctc
tccagtgaaggttctctctctcagtcatgctcgataaatgctgacaatagtgttggtttt
cagcttcataacttgagctccgcgtttggttcttctaaacaactgccaggccttatccca
aaccatttgggctcgccagtttcatatgttattaactcaagccaggttcttgatcaggga
cgtatgagaaatcctggggttggtaaaggttcctccattcccagtcgttttgcagtagat
gagtctgattcgtcaatgtgcagtttgaatactgcaaaaatctatcttgaggacactaaa
gttaagcaggagcctaacatgaatgtcatggaaaatgctaaagttggtccagcaaatttt
caaaaatttcaaccgggtgatcttatgagtgtcttcaatgactag
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