Solanum dulcamara (climbing nightshade): 129870155
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Entry
129870155 CDS
T09577
Name
(RefSeq) probable galacturonosyltransferase 4 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00520
Amino sugar and nucleotide sugar metabolism
sdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
129870155
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sdul01003
]
129870155
Enzymes [BR:
sdul01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
129870155
Glycosyltransferases [BR:
sdul01003
]
Polysaccharide
Structural polysaccharide
129870155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
129870155
NCBI-ProteinID:
XP_055800756
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All DBs
Position
10:72650234..72657473
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AA seq
681 aa
AA seq
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MKMKLRKPVLFLLLVTVLAPIVLYTDTLGTYFNSPSSSRTEFIEDLSTFTFGGDVRPLNV
LPQESSTSLKEPRGDVYSENSSHSLSNASDTLSSEDARKTRQLTEAESMKHQTATGSSND
GVEVATNGSHISQVTDNLHEPQKTDKTSPKLVSAGKNESRVMETSSKKKTSPTDSNHTLD
STSTKNEIRHDQNTVKTSGGVAGETARGKDEDRNAQIVPSDARVRQLKDQLIRAKVYLSL
SATRNNPHFIRELRLRMKEVLRALGEATKDSDLSRSANEKLKAMEQTLAKGKQIQDDCAT
IVKKLRAMLHSAEEQLRVHKKQTLYLTHLTAKTLPKGLHCLPLRLSTEYFKLNSSQQHFP
HQENLENPKLYHYALFSDNILAAAVVINSTVSHAKDPSKHVFHIVTDRLNFAAMRMWFLA
NPPQYATVDVQNVEEFTWLNSSYSPVLKQLNSQSMIDYYFRSRADSDPNVKFRNPKYLSI
MNHLRFYLPEIFPKLDKVLFLDDDIVVQKDLSGLWSLDLKGKVIGVVETCGESFHRFDRY
LNFSNPLISKNFDPRACGWAFGMNIIDLNEWRRQNITEVYHSWQNLNHERLLWKLGTLPP
GLITFWKRTYALDRSWHVLGLGYNPNVSQKDIQRAAVIHYNGNLKPWLEISIPKFRDYWS
KFVDYDQVFLRECNINKLGGS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaaactgaggaagccagttttgttcttgttgctagtgactgttctcgcccct
atagtcctttacactgacactcttgggacttattttaattctccttcttcatcaaggact
gagttcattgaagatctgtccacctttacttttggtggtgacgtccgacctctaaatgtg
ctgcctcaggagtcatccacatctctcaaagaaccacggggtgatgtatattctgaaaat
tcaagccattccctttccaatgcctcggacactttaagcagcgaggatgctcggaaaaca
agacaactaactgaagcagaatcaatgaagcatcaaactgccactggaagcagcaatgat
ggagtagaagtggctacgaatggaagtcacataagtcaggtgacagataacttgcatgaa
ccgcagaaaacagacaaaacttcaccgaaacttgtgtcagcggggaaaaatgaaagcaga
gtaatggaaaccagctcaaagaaaaagacgagtccaacagattctaaccacaccttggat
tccacatccacgaaaaatgaaataagacatgatcaaaacactgttaaaaccagtggtgga
gttgctggagagacagcaaggggcaaagatgaagaccggaatgcacaaattgtcccctct
gatgcccgtgttcgccagctcaaggatcagctcattagggcgaaggtctacctttcactc
tcagcaacacgaaataatccccacttcattagagaacttcgcttgcggatgaaggaagta
ctgcgagcacttggtgaggccactaaggattctgatctgtcaagaagtgccaatgagaag
ttgaaggcaatggagcaaacattggcaaaagggaagcaaattcaagatgattgtgctact
attgtaaagaagcttcgtgccatgcttcactctgcagaagagcagctccgtgtccacaag
aagcaaacattgtatttaacacacttaactgctaagacacttccaaagggtcttcattgt
cttcctttgcgcctttcaacagagtatttcaagttaaattcttcccaacagcattttcca
catcaagagaatttagaaaatcccaagctataccattatgcactcttctcagacaacata
ttagccgctgctgtcgtcataaactcaactgtttcccatgcaaaggatccttcaaagcac
gttttccatatagtgactgacaggcttaattttgctgcaatgaggatgtggtttttggca
aatccaccacaatatgctacagtagatgttcaaaatgtcgaggaattcacgtggctaaat
tcaagttacagtccagttctgaagcaattgaattctcagtccatgattgattattacttc
agatctcgtgcagattctgatccaaatgtgaagtttaggaatccaaagtacctttcaatc
atgaatcacttacgcttttacttgccggagatcttcccaaagctggataaggttctcttc
ttggatgatgatattgttgtgcaaaaggatcttagtggcctttggtcgcttgatcttaag
ggtaaggtgattggtgtggttgagacctgtggagaaagctttcatcggtttgaccgctac
ctcaacttctcaaatcctctgatctccaaaaattttgatcctcgtgcttgtggttgggca
tttggaatgaacatcattgatttaaatgagtggaggcggcaaaacatcacagaggtgtat
cactcatggcaaaatctgaatcatgaaagactactttggaagttggggaccctaccacct
ggtttgataaccttttggaagcgcacatatgccctcgaccgatcatggcatgtccttggg
cttggctacaatccaaatgttagccagaaggacattcaacgagcagcagtcatacattac
aatggaaacttgaaaccatggcttgaaataagcatacccaagttccgagactactggtca
aaatttgttgactatgatcaggtatttttgcgagagtgtaatatcaacaaattgggtggt
tcatga
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