Solanum dulcamara (climbing nightshade): 129870224
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Entry
129870224 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129870224
KO
K20168
TBC1 domain family member 15
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129870224
Membrane trafficking [BR:
sdul04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
129870224
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
129870224
NCBI-ProteinID:
XP_055800890
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Position
10:656625..669308
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AA seq
656 aa
AA seq
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MHEIDVHDLSDDADYAASVQQGSASMNRSDSSKQSSSGDQEGAEIVFVKDNVAIHPTQYA
SERISGRLKLIKQGGSLFMTWIPYKGQSSSARLSEKDKSLYTIRAIPFSDVRSIRRHTPT
LGWQYVIVVLSSGLAFPPLYFYNGGVREFLATIKQHAYLVRSADDANVFLVNDFQDPLQR
TLSSLELPRAVSVTNSPSSSAAASESPSSWTDGETFDRNSALAQQNARQRQKHNDPARDL
SIQVLEKFSLVTRFARETTSQLFREAQGDGFIPNDRRKHDEKTHDYPRIAESNDAQKLPE
DVPVPADPLEFDKLSLVWGKPRQPPLGAEEWSTFLDSEGRVTDSEAVRKRIFYGGVEPDL
RKEVWRFLLGYHSYDSTYAEREYLVSVKKSEYETIKNQWKSISKEQAKRFTKFRERKGLI
EKDVVRTDRSVSFYDEDDSPNIKCLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMGDES
ETFWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDIPLHNYFKQKDCLNYFFCFRW
VLIQFKREFEFEKTMRLWEVLWTHYGSEHLHLYVCVAILKRYRSKIIGEQMDFDTLLKFI
NELSGHIDLDAILRDAEALCICAGENGESCIPPGTPPSLPVDNASMYYQQDDDDVL
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaaattgacgttcacgatctctccgacgatgccgattacgctgcgtctgttcag
caaggttcggcgagcatgaataggagcgatagcagtaagcagagttcatcaggtgatcag
gaaggcgctgaaatagtgtttgtgaaagataacgtggcaattcatccgactcagtatgcc
tcagagaggatcagtggtcgactaaaactgatcaagcaaggaggttctctgtttatgact
tggattccatataaagggcaaagctcgagtgcaaggttgtctgaaaaagataagagtctt
tacactatacgagcaattccattctcggatgttagatcaattcgacgacacactcccacc
ctggggtggcaatatgttattgtagttttgtcatcaggactagcatttcctccgctttat
ttctacaatggtggtgtccgggagtttcttgcaacaattaagcagcatgcttatcttgtg
aggtcagccgatgatgctaatgtatttcttgtcaatgactttcaagatccactccagaga
actctctcctccttggaacttcctagggctgtttctgtaactaacagtccatcatcatca
gctgcagctagtgaatccccatctagctggacggatggggaaacttttgatagaaattct
gcacttgctcaacaaaatgccaggcaaagacaaaaacataatgatcctgctcgagatttg
tcaattcaagtactagagaaattttctcttgtgaccagatttgctcgtgaaacgacatca
caactttttcgtgaagctcagggagatggttttatccctaatgacaggaggaagcatgac
gaaaaaacacatgattatcctcgcattgctgaatctaatgatgctcagaagctacctgag
gatgttccagtgcctgcggatcccttggagtttgacaaactgtcactagtatggggaaag
ccacggcagcctcccttgggagcagaagagtggtctactttcctggactctgaagggaga
gtcacagactcagaagcagtaagaaagagaatattttacggaggagtcgaaccagatcta
cgtaaagaggtgtggcgatttctgttgggataccattcatatgattcaacttatgcagag
agggaataccttgtgtctgtcaaaaagtcggaatacgaaacgataaaaaaccagtggaag
agcatctctaaggagcaggcaaaaagatttacaaaattccgagagaggaaaggcctcatt
gaaaaagatgtggtgaggactgatcggtcagtttcattctacgatgaggatgacagccca
aacattaaatgtttgcgtgatatactgctgacatactcattctacaactttgatttgggg
tactgtcagggtatgagtgatctcctttcaccaatattgtttgttatgggagatgaatca
gaaacattttggtgctttgtggcattgatggaacgacttggaccaaacttcaaccgtgac
caaaatggaatgcactctcagctttttgcattatcaaagttggtggagttgttggacatc
cctctgcacaattacttcaaacagaaggactgcttgaattatttcttctgcttccgatgg
gttcttatacaattcaaaagggagtttgaatttgaaaaaaccatgcgattgtgggaggta
ttatggacgcattatgggagtgagcaccttcacctgtacgtctgtgtcgcaattctgaaa
agatatcgcagcaaaataataggagagcagatggatttcgacacgctactgaaatttatc
aatgagctgagtggtcatattgacctagatgctatcctcagggatgcagaggctctgtgt
atatgtgctggtgagaatggtgaatcttgcatccctcccggaactccaccttcattacca
gttgacaacgcttcaatgtactatcaacaagatgatgatgatgtactataa
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