Solanum dulcamara (climbing nightshade): 129870244
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Entry
129870244 CDS
T09577
Name
(RefSeq) two-component response regulator ORR24-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
129870244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdul03000
]
129870244
Transcription factors [BR:
sdul03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
129870244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
129870244
NCBI-ProteinID:
XP_055800921
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Position
10:30930..37004
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AA seq
704 aa
AA seq
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MTVEEIRGNMGGERENYDNFPVGMRVLAVDDDPICLKLLDGLLRKCQYHVTTTSQARTAL
TMLRENKDRFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANSDSNLVMKGIHHGAC
DYLVKPVRLEELKNIWQHVIRRKKVEPKNHKKSDDQDKAHQGGGEGERGSQLSGNADQNG
KVNKKRKDEEYESDENGNDDEDPATQKKPRVVWSIELHKKFVTAVHQLGLEKAVPKRILD
LMNVEGLTRENVASHLQKYRLFLKRINTADAQQANMVAAALGGKDSAYMRMGSLDGLGGF
RTLAGSGRFGQASLSSSYASGGMLGRLNSPAGVSLRNLASSPMLQPNRGQNLSNNSINAL
MKLNPNVPPASQNANLFQGIPASLELDQLQQSKCATRMVELNPLDESGLHTAASTFTNSR
LVGSANSSMPNVSNNPILLQVNSQQPLMGAGFGNQTSLNIASFSSEAFNAGVSGSSNFLD
HDRYNENWQTSIQPLKFQSSSFPLTEPFNYSHLPHDRVRDSDTSTGSHLQNNPVDFSTST
IVSLPFEASRGETQCHENFGGAVQIMNQATCQRWPDQNQHYSHNSNNMFGNVSSQVSSNG
GMTSLTHPMDQNNDLFCRRVETSLTGRSNGGSSMHIHHSESEKLTQNSRTSTNEDYLFQT
TKQQVGFLPQGYGSLDDLMSAIKREQDGAMLEGGEFGFDAYSLG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgactgtggaggaaattagaggaaatatgggtggtgaaagggaaaactatgataatttt
ccagttggtatgagggttcttgctgttgatgatgacccaatttgtttgaagttgttggat
ggactgcttaggaaatgccagtatcacgtaactacgacgagtcaggcaagaacggcgttg
acgatgttgagggaaaacaaagatagatttgacttggtgatcagtgatgtccacatgcct
gatatggatggctttaaacttctggagcttgttggtctcgagatggatcttccagtcata
atgttgtcagcaaacagtgatagcaaccttgtaatgaagggaatacatcacggtgcttgt
gactatttggtgaaacctgtccgccttgaggagctgaagaatatatggcaacacgtaata
aggagaaagaaagttgagcctaagaaccacaagaagtctgatgatcaagacaaggctcac
cagggaggcggagaaggtgaaagaggatcgcaactttcaggtaatgcagatcaaaatggg
aaggttaacaagaaaaggaaggatgaagaatatgaaagcgatgaaaatggaaatgatgat
gaagacccagcaactcagaagaaacctcgtgttgtttggtccatagagcttcacaagaag
tttgttacagcagttcatcagttaggccttgaaaaagctgtccctaagaggattcttgat
ctgatgaatgttgaaggacttacaagagagaatgtggctagccatctccagaagtatagg
ctcttcttgaaaaggatcaacacggcagatgcccagcaagccaacatggttgccgctgca
ttagggggtaaagattctgcatacatgcgaatgggttcactcgacgggcttggtggtttt
cgaacgttggctggatcaggaaggttcggtcaggctagcttatcatcatcatatgcatca
ggaggcatgcttggcagactaaatagtcctgctggtgtaagtcttcgcaatctagcatca
tcacctatgctccaacctaatcgtggtcaaaatttgagcaacaactccatcaatgccttg
atgaaattgaatccaaatgttccacctgcaagccagaatgctaatttgttccaagggatt
cctgcatcgttggagcttgatcaattgcagcagagtaagtgtgccacacgcatggttgaa
ttgaatcctttggatgagtcaggactgcacacagcagccagtacattcacgaactctagg
ttggttggtagcgcaaacagctctatgcccaatgtctcaaataatcctattttgcttcaa
gtgaactcccagcaaccactgatgggggcgggatttggaaatcagacttctctcaacata
gcctcttttagctccgaggcctttaatgctggtgtaagcggttcttccaattttctggac
catgatagatataatgagaattggcaaacttctatccagcctctgaagttccagtcaagc
tcctttccgttgactgaacctttcaactacagccatttgcctcacgacagagtacgagac
agtgatacttcaactggctctcatttgcagaacaaccctgttgatttttcaacctccacc
atagtttccctacctttcgaggcttcaagaggagaaacacaatgccatgaaaatttcggg
ggagctgttcagattatgaaccaagcaacctgccaacggtggccagatcagaaccaacat
tattcccacaactcaaacaatatgtttggcaatgtgagctctcaagtttctagcaatggt
ggaatgacctctttaacccatcctatggaccaaaacaatgatttgttctgcagaagggtg
gagacgtctttgactggcagatcaaatggaggttcttcaatgcacatacaccatagtgag
agtgaaaaattaactcagaactcgaggacaagtacaaatgaagactacctcttccagaca
acaaagcaacaagttggttttcttcctcagggctatggatcccttgatgatctaatgagt
gcaattaaacgggagcaagatggagccatgttagaagggggagaatttggatttgatgct
tattctcttggttga
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