Solanum dulcamara (climbing nightshade): 129870265
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Entry
129870265 CDS
T09577
Name
(RefSeq) DNA mismatch repair protein MLH1-like
KO
K08734
DNA mismatch repair protein MLH1
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03430
Mismatch repair
sdul03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129870265
03460 Fanconi anemia pathway
129870265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdul03400
]
129870265
DNA repair and recombination proteins [BR:
sdul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
129870265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
129870265
NCBI-ProteinID:
XP_055800959
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Position
10:66040516..66069956
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AA seq
738 aa
AA seq
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MEIEQAIIEVEMEDEPIPASIPQEPPKIRRLEESVVNRIAAGEVIQRPVSAVKELIENSL
DADSTSISVVVKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSKFEDLQSIRSMGFR
GEALASMTYVGHVTVTTITMGQLHGYRATYRDGLMVDEPKACAAVKGTQIMIENLFYNMA
ARRKTLQNSADDYPKIVDLISRFAIHHTHVSFSCRKHGAGRADVHTLTTTSRLDAIRSVY
GVSVARNLMKIEVSDTGPLNSVFKMDGFISNSNYIAKKITMVLFINERLVDCGALKRAIE
IVYTATLPKASKPFIYMSIILPPEHVDVNIHPTKREVSLLNQEFVIEKIQSVVGSKLRSS
NESRTFHEQIVDFSSSSPMATIKDSIKELSPSGIKTQKVPHKMVRTDTLDPSGRLHAYMQ
MKPPGNSESSSCLSSVRSSIRQRRNPSETADLTSIQELVNEIDKDCHPGLLDIVRHCTYT
GMADEIFALLQHNTHLYLVNVINLSKELMYQQVLRRFAHFNAIQLSEPASLPELVMLALK
EEGTDPEGDESNELRRKIAEMNTELLKQKAGMLEEYFSIHIDSNGNMSRLPVILDQYTPD
IDRIPEFMLCLGNDVDWEDEKICFQTIAAALGSFYAMHPPLLPNPSGDGLKFYRKRVLSS
GGEGTSVENIENDTMEAEFEEALLLEAENVWAQREWSIQHVLFPSLRLFFKPPNSMATNG
TFVQVASLEKLYRIFERC
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgaacaagctattattgaagtggaaatggaagatgaacccattccagcctcg
attccccaggagccaccgaagattcggcgtctggaggaatctgtggttaacagaatcgcg
gctggggaagtcatccaacggccagtgtctgccgtcaaagagctcattgagaacagcctg
gatgctgattccacctctatttccgttgttgttaaggatggtggtcttaaacttatccaa
gtttccgacgatggccatggaatccgttacgaagatttgccaattttatgcgagaggcat
acaacatccaagctgagtaaatttgaagatttgcagtccattagatcgatgggatttaga
ggagaagccttggctagcatgacatatgtgggtcatgtcactgtcaccaccattactatg
ggccagttgcatggatacagggcaacatatagagatggtttgatggtggatgagccaaaa
gcttgtgctgctgtcaagggtacccagataatgattgagaatttattttataacatggct
gcgcgaaggaaaacccttcagaattctgccgatgactatccaaaaattgttgaccttatt
agtaggtttgcaattcatcacacacatgtgagcttctcttgtagaaagcatggagctggt
agagcagatgttcacactctcactactacttcaaggcttgatgcaattagatccgtttat
ggagtttcagttgctcgaaatctgatgaaaatcgaagtttctgatactggtccattaaat
tcagtttttaagatggatggtttcatctccaactctaattatattgcgaagaagataaca
atggtgctttttataaatgaaagactcgttgattgtggtgctttgaagagggcaattgaa
atagtctatactgcaacattgcctaaagcatcaaaacctttcatatacatgtcaatcatt
ttgccacccgagcatgttgatgtgaatatacacccaacaaagagagaggtaagccttttg
aatcaagagttcgtcatagagaagatccagtctgtagtagggtcaaaattgagaagctcc
aatgagtcgagaacattccatgaacagattgtggatttttcttcatccagtccaatggcc
acaattaaagattccattaaagaactgtctccttctgggataaagacacaaaaagtgcca
cataaaatggtacgaacagatactttggacccttccggaaggttgcacgcttacatgcag
atgaagcctcctggtaattcagaaagtagttcttgcttgagctctgtgaggtcttccatc
agacaaaggaggaatcctagtgaaaccgcagacctcactagcatccaggagcttgttaat
gagattgataaggactgtcaccctggtctattggatattgttaggcattgcacatatact
gggatggcggatgagatttttgctttgcttcaacacaatacacacctttatcttgttaat
gtgattaacttgagtaaagagcttatgtatcagcaagttttacgtcggtttgcccatttc
aatgcaattcaactgagtgaaccagcatcattacctgagttagtaatgcttgctctgaaa
gaagagggtacagatccagaaggcgatgaaagcaatgagctaagaagaaagattgctgag
atgaatacagaactgctcaagcaaaaggctggaatgctagaagagtattttagtattcat
atcgattcaaatggcaatatgtctagacttcctgttatactggatcagtacacacctgac
atcgaccgcatcccagaatttatgctttgtttgggaaatgatgttgactgggaggatgag
aaaatttgttttcagacaattgctgctgccctaggaagtttttatgccatgcatccacca
ttattgcctaatccctcaggtgatggcttgaaattctacagaaagagagtgctttcaagt
ggtggagaaggaacttctgtagaaaacatagagaatgataccatggaggctgaatttgag
gaagcattacttttggaggccgaaaatgtctgggctcaacgtgaatggtcaattcagcat
gttctgtttccctccctcaggctcttcttcaagccccctaattctatggctacaaatgga
acttttgttcaggttgcatcactggaaaagctctacagaatttttgagagatgttaa
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