Solanum dulcamara (climbing nightshade): 129870291
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Entry
129870291 CDS
T09577
Name
(RefSeq) ABC transporter A family member 1 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129870291
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdul02000
]
129870291
Transporters [BR:
sdul02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
129870291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
129870291
NCBI-ProteinID:
XP_055800993
LinkDB
All DBs
Position
10:73159284..73184542
Genome browser
AA seq
1903 aa
AA seq
DB search
MEKKEEKEKEDMRNSRRQLKAMLRKNWLLKIRHPFVTFAEILLPTLVMLLLIAVRSKSDI
RIHPAQPYIRKGTGMFVEVGKGDTSPPFNQVLELLLAKEEHLAFAPNTAETRMMINILSL
KFPVLRLVTKVYEDEEELESYLRSDLYAAYDQNKNLTNPKIKGAVVFHEQGPQLFDYSIR
LNHTWAFSGFPNVKTIMDTNGPFLNDLALGVNTVPILQYGLSGFLTLQQVMDSFIIYAAQ
ETMTNLLSSPSHSLDSDAQLKIPWTQFSPSDIRLAPFPTREYTDNEFQSIVKKVMGVLYL
LGFLYPISRLISYSVLEKELKIKEGLYMMGLKDTIFHLSWFITYAIQFALSSVLLTVCTM
STLFQYSDKTLVFVYFFSFGLSGIMLSFMISTFFTRAKTAVAVGTLTFLGAFFPYYTVND
ETVSMIVKVIASFLSPTAFALGSINFADYERAHVGLRWSNMWRESSGVCFLVSLLMMLLD
SLLYFAVGLYLDKVLHKENGFCYPLRSLIQKCFGRKKNTRNNYASTSEVKFTEHYDETSS
TDFIKDVSGPTLESMSLEMKQQESDGRCIQIRNLQKVYATNRGNCCAVNSLQLTLYENQI
LALLGHNGAGKSSTIAMLVGLVSPTSGDALVLGKNILTDMAEIRKSLGVCPQYDILFPEL
TVKEHLEIFADLKGVPEDSKEKAVTEMVDEVGLADKLNTVVKALSGGMKRKLSLGIALIG
NSKVIILDEPTSGMDPYSMRLTWQLIKRKKKGRIILLTTHSMDEADVLGDRIAIMANGSL
KCCGSSIFLKHQYGVGYTLTVVKTAPGASVAADIVYRHVPSATCVSEVAAEVSFKLPLSS
SSSFESMFREIERCMRRSNPEFETTDCREIDNLGIESYGISVTTLEEVFLRVAGGDFDQA
EILEEKVDPNLCDSVDLKVCQTNASKTFFPSKLCGNYFGVIWLMVTLIGSACSLIWAAVS
SVIRLVTMQCCCCGILSISTFWKHSKALLVKRAKSAQRDQKTIVFQLLIPAFFLLLGLLF
LKIKSHPDQQPVFFTTSYFNPLLSGGGGGGPIPFDLTFPIAKEVANHVHGGWIQKYHETT
YRFPDSTKALNDAIEAAGSTLGLRLLSMSEYLMSSFNESYQSRYGAIVMDNQSGDGSLEY
TVLYNSSCQHSAPTFINLMNSAILRLATQNENMTIRTRNHPLPQTASQHQQHHDLDAFSA
AVVITLAFSFIPASFAVAIVKEREVKAKHQQLISGVSIFSYWASTYIWDFISFLFPSSFA
LVLFWIFGLDQFIGKDSLIPTIVLFLEYGLAIAPSTYCLTFFFSEHSMAQNVVLLIQFFT
GLILMVLSFIMGFMDSTTHLNSLLKNFFRLSPGFCFADGLASLALLRQGMKNGSRDNVLD
WNVTGASISYLAAEAIVYFLLTLGLEFLPQQKRSLSRVHEWWESLGKSRRANSLGFYEPL
LRPSSGDVASELDEDVDVKAERDRVLSGSTDNAVIHLRNLRKVYPGGKSQVPKAAVHSLT
FSVQEGECFGFLGTNGAGKTTTLSMLSGEEYPSDGTAFIFGKDIRSDPKVARRHIGYCPQ
FDALLEFLTVQEHLELYARIKGVPEYDLEDVVMQKLLEFDLMKHANKPSFALSGGNKRKL
SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRRGKTAVILTTHSMNEAQALC
TRIGIMVGGRLRCLGSSQHLKTRFGNHLELEVKPVEVSSMDLENLCLIIQEKLFDIRPHS
RSILNDIEVCIGGTNSIVSEDASAAEISLSKEMIMAVGQWFGNEERVKALVSATDDSCKI
FGDQLSEQLARDGGLPLPIFCEWWLAKEKFTKIHSFIESSFPDATFQGCNGLSVKYQLPC
GEGLSLADVFGYIERNRNQLGISEYNVSQSTLESIFNHLAASS
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaggaggagaaagaaaaagaagatatgaggaattcaagaagacagctcaaa
gctatgcttaggaagaattggcttctcaaaattagacacccttttgttacctttgctgag
attttactcccaactctcgtaatgctgttgttgattgctgtgaggagtaaatctgatatc
cgcatccacccagctcagccgtatattcggaaagggacagggatgtttgtggaagttgga
aaaggtgatacttctcccccttttaaccaagttctagagctactattggccaaggaggag
catttggcatttgcacctaatacagctgagacaaggatgatgatcaacattttgtctcta
aaatttcctgtactgaggctagttaccaaagtttatgaagatgaagaagaacttgaatca
tatctacgttcggacctttatgctgcatatgaccaaaataagaaccttacaaaccccaaa
attaaaggagcagtagtatttcatgagcaaggtcctcagttatttgattatagcatacgc
ctaaaccatacatgggctttctcaggatttcctaatgttaaaaccataatggacacaaat
ggtccatttctgaatgacttggcattaggtgtcaacacagtaccaattttgcaatatggt
ctcagtgggtttttaacactccaacaagtcatggactcattcataatatatgctgctcaa
gaaactatgacgaacttactaagctcgcctagccactctcttgattcagatgcccagctc
aagataccatggactcagtttagtccttcagacataagacttgctccatttccaactcgt
gaatatacggataatgaattccagtccattgtcaagaaagtcatgggagtgctgtacttg
ctggggtttctttatccgatttctcgtttaataagttattctgtcttagaaaaggagctc
aagataaaagagggcctctacatgatgggtttgaaagacaccatatttcatctctcttgg
tttataacatatgctattcagtttgctctttcttctgtgctacttacagtatgcaccatg
agtaccctgtttcaatacagtgataagacgttggtgttcgtgtatttcttttcctttggc
ctcagtggaattatgctctcatttatgatttccacgttcttcacaagagcaaaaactgca
gtagctgtcgggacccttactttcctcggggcattctttccttattatactgtcaacgac
gaaacagtctccatgatagtgaaagtgattgcttctttcctttcacctacggcctttgcg
ttaggatccatcaattttgctgactatgagcgtgctcatgttggactccggtggagtaat
atgtggcgggaatcttcaggagtgtgctttttggtctctctcctgatgatgttacttgac
agtctgttgtactttgcagttggtctgtatcttgacaaggtacttcacaaggagaatgga
ttttgttacccattgcgttccttgatccagaagtgctttgggaggaagaaaaataccaga
aataattatgcatccacctcagaagtcaaattcactgagcattatgatgaaacaagcagt
actgattttataaaagatgtatccggaccaactctagaatcaatgagcttggagatgaag
cagcaagaatcggatggcagatgtattcagatcaggaacctgcaaaaggtgtatgctaca
aataggggaaactgctgtgctgttaattctttacaactgacattgtacgagaatcagatt
ctggcacttttaggacacaacggggctggtaaaagcagtacaatagccatgcttgttggt
ctcgtttctcctacttctggagatgctctggtgttagggaaaaacatcctaactgacatg
gctgagatacggaagagcctgggagtctgccctcagtatgatattcttttccctgaatta
actgtgaaggaacatttagaaatattcgctgatttaaagggtgttccagaagactctaag
gaaaaggctgtgactgaaatggttgatgaagttggattggcagacaagcttaatactgtt
gttaaagctctttctggaggtatgaaaaggaagttgtcccttgggatagctctaataggg
aacagtaaggttattattctcgatgaaccaacaagtggaatggatccatactctatgcgg
ttaacttggcagctgattaaaagaaaaaagaagggaagaatcatattacttacaacacac
tccatggacgaagctgatgtgctaggagatcggattgctatcatggccaatggttctcta
aagtgctgtgggagttcaatcttcttgaaacatcagtatggggttggttacactcttact
gtggtgaagactgcgccaggtgcctcagtagctgctgatattgtttaccgtcatgtacct
tctgcaacatgcgtgagcgaagttgctgcagaggtttccttcaagcttcccctatcatcc
tcatcttcctttgagagcatgtttcgggaaatagagcgctgcatgagaagatccaaccct
gaattcgaaacaacagactgtagagaaatagacaatcttggcattgagagttatggaata
tctgtcactactctggaggaagtgtttctgagggttgctggtggtgacttcgatcaagca
gagatccttgaggagaaagtggatccaaatttatgtgattccgttgatttaaaagtgtgc
caaactaatgcttcgaagacattcttcccttccaaattatgtggaaactattttggagtc
atttggcttatggtgaccttaattggttcagcttgtagtctaatctgggctgcagtttca
agtgtcattaggcttgtgacgatgcagtgctgttgctgtggtatactgtcaatatctact
ttctggaaacactcgaaagcgctacttgttaagagagcgaaatcagctcaaagagatcag
aaaacaattgtattccagctgttaattcctgctttctttttgcttcttggtctgctgttt
cttaagattaagtcacatcctgatcagcagccagtcttcttcacgacctcgtactttaat
cctttattaagtggtggtggaggaggtggtccaattccttttgacctcacctttcctata
gcaaaggaggttgccaaccatgtccatggaggctggatccaaaagtatcatgagacaaca
tacaggtttcctgattctaccaaggcattgaacgacgccatagaagcagcaggatcaact
ttgggccttcgcctactttcgatgagtgaatatctgatgtctagcttcaatgaatcttat
cagtcaaggtatggagccatagtcatggataatcagagtggtgatgggagccttgagtat
actgttctatacaacagttcttgtcagcattctgctccaacatttatcaatttgatgaat
tcagcaatactcaggctagctacacaaaatgaaaatatgacaattcgcactcgtaaccac
cctttgccgcagacagcaagccagcatcagcaacatcatgatcttgacgccttctctgca
gcagttgtaatcactttagcattttcttttattcctgcctcatttgctgtggcgattgtc
aaggaacgtgaagtgaaagctaagcatcaacagctaatcagtggggtgtccatattctca
tattgggcttccacatatatatgggatttcatcagcttcttatttccttcatcatttgcg
ttagttctcttttggatatttggtcttgatcaatttattggaaaggattctctcatccca
acaattgtgttgtttcttgaatatggactagcaatcgctccatcaacatactgcctcaca
ttcttcttttccgagcacagcatggctcagaatgtcgtcctcctcatccagtttttcact
ggcctaattcttatggttctgtccttcataatgggatttatggattctacaacacactta
aattctctgctcaagaacttctttagactgtcaccgggattttgcttcgctgatggatta
gcttcattagctcttttaagacaagggatgaagaatggatctagagataacgtacttgac
tggaatgtgactggtgcttccatatcatacttggctgctgaggccattgtgtatttcctt
ttaactctggggcttgaattcctgcctcaacaaaaaagaagtctttccagagttcatgag
tggtgggaaagcttgggaaaatctagacgtgctaattccctggggttttacgaacctctt
ctgcgaccatcctcaggggatgttgcttctgaactcgatgaggacgtagatgtcaaagca
gagagagacagggttttatctggctcaactgataatgcagttatccacctccgtaatctt
cggaaggtctatcctggagggaagtcccaagttccaaaagctgctgtccattcactgact
ttctctgtccaagaaggagagtgttttgggttcttaggaactaatggagcagggaagaca
acaacactgtcaatgctatctggagaagaataccctagtgatggaacggcattcattttt
ggtaaagatatacgttcagaccccaaggttgctcgtagacatattggatattgtcctcag
tttgatgctttactagaatttctgactgtccaagaacatcttgagctctacgcaagaatt
aaaggagtaccagagtatgatctggaagatgttgttatgcaaaagttgctagagtttgac
ctgatgaagcatgcaaacaaaccatcttttgccttgagtggaggaaacaagcgcaagtta
tctgttgcaattgcaatgattggagatcctcctatcgtcattcttgatgagccatccaca
ggtatggatcctattgccaaacgtttcatgtgggaagttatatctcgtttgtcaactaga
cgaggaaagacagctgtaattttaactacccacagcatgaatgaggctcaagctctatgc
acaaggattgggataatggttggaggcaggttgaggtgtcttggtagctctcagcacttg
aaaactcgcttcgggaatcatcttgaacttgaggttaaaccagttgaagtcagctctatg
gatctggaaaatctctgcttaataatacaagaaaagctattcgatattcgtcctcactct
aggagtatactaaatgacattgaagtttgcattggaggtactaactctatagtctcagaa
gacgcatcggcggcagaaataagcttatcaaaggaaatgatcatggctgttggacagtgg
tttggcaatgaagaaagggtgaaagcattagtatctgcaactgacgactcttgtaaaatt
ttcggtgaccagttgtcagagcagttggctcgtgatggtggactcccgttgccgatattc
tgtgagtggtggttggctaaggagaagtttaccaaaatccattcattcattgagtcttca
tttcctgacgctacatttcaaggttgcaatggattgagtgtcaagtatcagttgccttgt
ggagaaggtctttcactcgctgatgttttcgggtacatagagaggaacagaaaccagctc
gggatatcagagtacaatgtcagtcaatctacacttgaatcgatatttaatcatttagca
gcaagctcatga
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