Solanum dulcamara (climbing nightshade): 129870310
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Entry
129870310 CDS
T09577
Name
(RefSeq) F-box/LRR-repeat MAX2 homolog A-like
KO
K27701
F-box protein MAX2
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129870310
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
129870310
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box_5
F-box-like
DUF7885
Motif
Other DBs
NCBI-GeneID:
129870310
NCBI-ProteinID:
XP_055801019
LinkDB
All DBs
Position
10:5909761..5915582
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AA seq
724 aa
AA seq
DB search
MATSARPTTINDLPDVILSNIIAAVSDARSRNAAALVCRKWLVLERSTRTSLTLRGNIRD
LFMLPTCFRSVTHLDLSLVSPWGHPLLSPRAASSDGDGDADSALIAHLLRHAFPSVTSLT
VYSRSPHTLQFLPVQWPQLKHIKLVRWHQRPQLASGDEFNLLFHGCPQLGSLDLSTFYCW
TDDIPPALESNPLVAVNLTVFNLMNASFSEGFKTDEIRVITKCCPNLKELKIACMFDPMY
IGFVGDEALVCISTNCPKLTVLHLADTSTLSNCRADPDDEGFTTDDAKFSVSTLIEVFSG
LSLLEELVLDVCNNVRDSGPALEILNTKCPKLRSLKLGQFHGVSMPIESKLDGVALCQGL
KSLSIRNVGDLDDMGLIAIGRGCTRLAKFEIQSCKKITMRGMRTLASLLWKSLVDVRISC
CKNLGASSSLKALEPIQERIQRLHIDCVWDSVEEIENLNGVEYGFDLNKTNGGEASTHAD
GFGYTYGTMDDDIMFHRNKRCKYDYDLNSVCMEDNGHGNGFGGRTWDRLQYLSLWIGVGD
LLTPLAAAGLEHCPNLEEIKIRVEGDCRLWSKPSERAFGLSTLSWYHKLVKMHLDCGDII
GYTHTAPSGQMDLSLWERFYLYGIGNLNLRELDYWPPQDRDVNQRSLSLPAAGLLQQCIA
LRKLFIHGTANEHFMMFLLRIPNLRDVQLREDYYPAPDNDMSTEMRSDSLCRFEGALNRR
HICD
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggctacttcagctagaccaaccaccattaatgaccttcctgatgtaatcctttctaac
ataatcgccgccgtctccgacgcccgcagccggaacgccgccgcactcgtctgccgtaaa
tggcttgtccttgaacgttccactagaacttccctcaccctccgtggtaacatccgtgac
cttttcatgttacccacttgcttccgatctgttacccatctcgacctctcacttgtttct
ccttggggacacccactcctctctccacgcgccgcctccagcgacggcgacggggatgct
gattctgccctcatcgcacacctcctccgccatgcgtttccttcagtcacttcgctcact
gtctactcacgtagcccacataccctccagtttttgccagttcagtggcctcagcttaag
catatcaagcttgttcgttggcatcagcgtccgcaattagcaagtggggatgaattcaac
ttgctatttcatggatgcccgcaactgggttcgcttgatttatctactttttattgttgg
actgatgatattcctccagctcttgaatcaaaccctcttgtagcggttaatctaacagtg
ttcaatctgatgaatgcttcgttttcggaaggtttcaagacggatgagattagagtaatt
acgaaatgttgtccgaatttgaaagagttgaaaattgcttgtatgtttgatcctatgtac
attgggtttgttggggatgaagctttggtttgtatatctacaaattgcccaaaattaaca
gtgcttcatttagcggatacttctactttgtctaattgcagggctgatccagatgatgag
gggtttactacggatgatgcgaaatttagtgtttcaactttgattgaggtattttcgggt
ctttccttacttgaagagcttgtattagatgtttgtaataatgttagagatagtggtcct
gctctggaaatactgaacacgaaatgtcccaaattgagatcgttgaagttggggcaattt
catggcgtttctatgccaatcgagtctaagttggatggagttgcactttgtcaggggctt
aaatctttgtcgattagaaatgtaggtgatttggatgatatgggtttgatagcaattggt
agagggtgtacaagactagccaagtttgagattcaaagttgtaagaagatcacgatgaga
ggaatgaggacgctagcttctttgctctggaaaagtttggttgatgttaggatatcttgc
tgcaagaatcttggagcctcttcttcattgaaagcattggaaccaatacaagaacgtatc
cagaggcttcatattgattgcgtgtgggatagtgttgaagaaattgaaaatcttaatggc
gttgaatacgggtttgatctcaataagaccaatggaggtgaggcatcaactcatgctgat
ggatttgggtacacatatggaaccatggatgatgatatcatgtttcacaggaataaacga
tgcaagtacgactatgatcttaatagtgtttgcatggaagacaatggccatgggaatggt
tttggtggacgaacatgggaccggctgcaatatctctcactttggattggtgtaggtgat
cttttaactcctttagcagctgcaggtcttgaacattgtcctaacttggaggagatcaag
attcgggtggaaggagattgcaggctatggtcaaaaccttcagagagggcgtttgggttg
agcaccctttcgtggtaccataaacttgtgaagatgcatttggattgtggagatatcata
ggttacacacacactgccccatctggccagatggatttgagcttgtgggaacggttttat
ctctatgggattggaaatttgaatctcagggagctggattactggccaccacaagatagg
gatgttaaccaaagaagtctatccctgccagcagctgggctgctccaacaatgcatcgca
ctcagaaagttgttcatccatggaacagcaaatgaacatttcatgatgttcctgcttaga
atcccaaacctaagagatgtacagctgagagaagattactatccagcaccagataatgac
atgagtacagaaatgagatcagactccttgtgccgctttgaaggggccctaaacagacga
catatttgtgattga
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