Solanum dulcamara (climbing nightshade): 129870430
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Entry
129870430 CDS
T09577
Name
(RefSeq) AP-1 complex subunit gamma-2-like isoform X1
KO
K12391
AP-1 complex subunit gamma-1
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129870430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129870430
Membrane trafficking [BR:
sdul04131
]
Endosome - Golgi transport
Others
AP-1 complex
129870430
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
INTS1_R4
Cnd1
HEAT_2
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
129870430
NCBI-ProteinID:
XP_055801195
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Position
10:52687390..52733254
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AA seq
879 aa
AA seq
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MNPFSSGTRLRDMIRAIRACKTAAEERGVVRKECASIRASISENDPDYRHRNLAKLMFIH
MLGYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSIKQDLNHTNQY
IVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCSIRIIKKVPDLAENFVN
PVAALLKEKHHGVLITGVQLCADLCKVSAEALDYFRKKCTDGLVKVLKDVANSAYAPEYD
ISGISDPFLHIRLLKVLRVLGQGDADASDSMNDILAQVATKTESNKNAGNAILYECVETI
MSIEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLMRAIAVDSQAVQRHRATILECVKD
SDPSIRKRALDLVYLLVNDTNVKPLTKELTEHLEVSDPEFKGDLTAKICSIVEKFSPEKI
WYIDQMLKVLSEAGNYVKDEVWHALIVVITNASDLHGYAVRSLYRAVHKAGEQETLVRVA
VWCIGEYGEMLVNNVGRLDIEEPATVTESDAVDMLETSIKSHSCDLTSQAMCLIALLKLS
SRFPSFSQRINDIIGQYKGSFVLELQQRAIEFNSIIERHQNMRSSLAERMPVLDEATFSG
RRGGSVPVVVSTSQGVSVNLPNGSAKLSTAAVADLLDLSLDDAPAPSSSGGEFLQDLLGV
NLIPVSLQPDANQAQKSSADVLMDLLSIGTPPAQRSPSTPQVLSSNTDNRSPLDILDRLS
TPSASSTQVSSTGGNSSMLDLLNGLPSSPPMSVTEGNGPAHSSVTAFESSSLRLTFNISK
KRGNPQMTLIDGSFTNKSQDVFTDFIFQAAVPKFLQLQLDPASGNTLPANGNGSITQKLR
ITNSQHGKKSLVMRIRISYKVNNKDVLEEGQVSNFPRDL
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccttttcctccggcacgcgtctcagggacatgattcgggctatccgtgcttgc
aaaactgcagcagaagagcgtggcgtagtaagaaaggagtgtgcttctattagagcttca
atcagtgaaaatgatccagattatagacatcgtaatcttgcaaaactaatgtttattcac
atgctgggttacccaacacattttggtcaaatggaatgcttgaagttaattgcatctccg
ggattcccagagaagcgaataggatatcttggtctaatgttgctgcttgatgaaagacaa
gaagttctcatgttggttacaaattctataaaacaagatcttaatcacaccaaccaatat
attgttggacttgcactttgcgccttgggaaacatttgttctgcagaaatggctcgtgat
ttagcacctgaagtcgaaaggttacttcagtttagagatcctaatatccgaaagaaggca
gcactttgctctataagaataataaagaaggtcccagatcttgccgaaaattttgttaac
cctgtagctgccttgctaaaagagaagcaccatggagtcctcatcactggtgtccagctt
tgcgcagatctatgtaaagttagtgcagaggcccttgactattttagaaagaaatgcaca
gatggtttagtgaaagtgctaaaggatgttgccaacagcgcgtatgcgcctgaatatgac
atttccggcatttcagacccttttcttcatataagattgctcaaggtcttacgtgttttg
ggccaaggtgatgctgatgctagtgattccatgaatgacattcttgctcaggtggcaaca
aagacggagtcaaacaaaaatgcaggcaacgctattctctatgaatgtgttgaaactatc
atgagcattgaagataatggtggtttacgtgtgcttgctattaatattttgggaagattt
ttgtccaaccgtgacaataacatcagatatgtcgccttgaacatgctgatgagagctata
gctgtagatagtcaagcagtacaaaggcatcgggcaacaattttagaatgcgtgaaggac
tctgatccatcaattcgtaaaagagcccttgacctagtgtatctattagtaaatgacacc
aatgtgaagccattaaccaaggagttaactgaacatctggaagtaagcgatccagagttt
aagggagatctgactgccaaaatctgttccattgtggaaaagttctcccctgagaaaatt
tggtacattgatcagatgctcaaggtcctttctgaggctggaaactatgtcaaggatgag
gtgtggcatgctctgattgtggtgattacaaatgcttccgacctccatggatatgcagta
cggtctttgtacagagctgtgcataaagcaggggaacaggaaacccttgttcgagttgca
gtatggtgcatcggagagtatggtgaaatgctagtcaataatgttggaaggcttgacata
gaagaacccgcaactgtgacagagtcagatgctgtggatatgttggagacatccatcaaa
agccattcgtgtgatcttacatctcaggcgatgtgtctgattgctttgctaaagttgtcc
agtcgctttccatctttttcacagcgcataaatgatatcattggtcagtataaaggaagt
tttgtgcttgaactgcaacagagagctattgaatttaactctattatcgagaggcatcag
aatatgaggtcttcactcgcagagagaatgccggttcttgatgaagcaaccttcagtgga
aggagaggtggttctgtgccagtagttgtgtcaacttcgcaaggagtatcagttaatctt
ccaaatggatctgccaagctcagtactgctgctgtggctgacttgctcgatcttagttta
gatgatgctcctgcacctagctcttctggtggagagtttcttcaagatcttcttggtgtc
aatctgataccagtgtctttgcaaccagatgcaaatcaggcccaaaagagtagcgctgat
gttctaatggatcttttgtcgattggaactcctcctgctcagagaagcccatctacacct
caggtgttatcctccaatacagacaatagaagtccattggatatattagatagattgtcc
acaccttcagcttcttcaacgcaagtctcttctactggtggaaattcttctatgttggat
ttattgaacgggcttccttccagtccaccgatgtctgttacagaaggcaatggtccggca
cattcatcagttactgcatttgagagcagctccttgagattaacattcaacatctcaaag
aagcgtggaaacccacagatgacacttattgacggtagttttacaaataagtcacaagat
gttttcacggacttcatcttccaggcagcagttccaaagttccttcaactgcaattggat
ccagctagcggtaataccctacctgcaaatggtaatggatcaatcacacagaagttgaga
atcacaaacagccaacatggcaagaaatcccttgtcatgcgcatacggataagttataag
gtgaataacaaagatgtcttggaggaaggccaagtcagcaattttcctcgcgatttatga
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